G82813


Basic Information

Item Value
gene id G82813
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 23904860 ~ 23905395 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU111587
GACGTATTTATTGATGTTGGACAAGGAAAAAGCAAGCTGCCCACATGGCTACAATGGCCCAACACTAGTCTTGAGTGATTATTTTTATCAGCTTTAAAATTATAACGTTATACCTGGGGTGCctagtctctctgtaagttataaatgtgtatatcagcATTGGAAAATATGTATGTGTAATATCTGATATCGACATCGGCCCAGAATTCCAACCTTGGTGCATCCCTAaagataaaaatgaatttaagctATGCAATAGTAAAAAAACTACAAACCATTGCCATTCGGCCTTAAGCCAAGTGTTTAATGTTATCttatttcagtttagtttttgttttatttcagtacATACTTATACTGATGATAGTGTTTGTGCTGTAACTGGGTGTAGTATACAGTTTTTGtttaaagtttacatacacttattATTGACATGAATATCATGGCAACATTGATGTAGGCTAAAACTACATTAAACCATTTTCTTGTTGGGAGACCATTGTGTCCAAATATCATCTGTCTGGCTGATGGTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111587 True 536 lncRNA 0.34 1 23904860 23905395

Neighbor

gene id symbol gene type direction distance location
atg14 atg14,zgc:113944,LOC106602264,LOC106611244 coding upstream 334171 23564126 ~ 23570689 (+)
LOC103031726 tbpl2,LOC107729258,LOC107586674,LOC107693101 coding upstream 341810 23559052 ~ 23563050 (+)
LOC103030470 mapkbp1 coding upstream 355325 23505656 ~ 23549535 (+)
LOC103028567 NA coding upstream 406303 23475259 ~ 23498557 (+)
tyro3 tyro3,LOC107693181,LOC107729301,LOC107586589,LOC107689305,LOC107589665 coding upstream 431774 23454001 ~ 23473086 (+)
LOC103037620 ctbp2a,LOC103037620,LOC108428680,LOC107692786,LOC107589601,LOC107729277,LOC107665110 coding downstream 34515 23939910 ~ 24009312 (+)
LOC103037301 LOC108428614,LOC108269476 coding downstream 107158 24012553 ~ 24019511 (+)
fzd3 LOC108428681,LOC107729283,LOC108270052,LOC107665105,LOC107589599 coding downstream 118147 24023542 ~ 24046622 (+)
LOC103044752 LOC108428615 coding downstream 199817 24105212 ~ 24110198 (+)
ahi1 ahi1 coding downstream 207741 24113136 ~ 24125115 (+)
G82785 kiaa0586 non-coding upstream 132743 23769525 ~ 23772117 (+)
G82768 NA non-coding upstream 308386 23596212 ~ 23596474 (+)
G82766 NA non-coding upstream 313967 23590500 ~ 23590893 (+)
G82763 NA non-coding upstream 323109 23581148 ~ 23581751 (+)
G82753 NA non-coding upstream 351941 23499036 ~ 23552919 (+)
G82814 NA non-coding downstream 2943 23908338 ~ 23908608 (+)
G82816 NA non-coding downstream 7734 23913129 ~ 23915459 (+)
G82838 NA non-coding downstream 231181 24136576 ~ 24138904 (+)
G83064 NA non-coding downstream 409320 24314715 ~ 24314965 (+)
G83071 NA non-coding downstream 444046 24349441 ~ 24350535 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other upstream 27090 23875439 ~ 23877770 (+)
G82609 baz1a other upstream 673542 23230430 ~ 23231318 (+)
G82488 NA other upstream 1546725 22357644 ~ 22358135 (+)
ralgapa2 ralgapa2,LOC107687934 other upstream 2231422 21520907 ~ 21673438 (+)
G81763 NA other upstream 4231222 19673127 ~ 19673638 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 4287 23909682 ~ 23973975 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other downstream 233994 24139389 ~ 24142232 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 990499 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 1028769 24934164 ~ 24936186 (+)
c9h8orf74 NA other downstream 1124602 25029997 ~ 25034121 (+)

Expression


Co-expression Network