G83064


Basic Information

Item Value
gene id G83064
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24314715 ~ 24314965 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU111920
cacgcacgcacgcagtCAGGCGCACacaccctctctccctctcctgcATATAGAAAAAAACTCATGAGGTACAAAAGCTGGgtttaaaaacactatatacGCTGtgttctcagaaaaaaaaaacagcagcagagcctCACTCTGAAGTTATTCTACCTCCTGCTGTAGATTTATAAAGTTTATAGAGCTCTAAGCTGATAAAAGAGGGTTATTTAATGGAGAGAGTGTGGATACAGCTCTTACCAGTTCAG

Function

NR:

description
PREDICTED: plasma membrane calcium-transporting ATPase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111920 True 251 lncRNA 0.42 1 24314715 24314965

Neighbor

gene id symbol gene type direction distance location
trnal-uaa_4 NA coding upstream 4220 24310413 ~ 24310495 (+)
trnal-uaa_3 NA coding upstream 5825 24308808 ~ 24308890 (+)
trnal-uaa_2 NA coding upstream 7282 24307351 ~ 24307433 (+)
trnal-uaa_1 NA coding upstream 8022 24306611 ~ 24306693 (+)
stx11 stx11 coding upstream 11949 24299171 ~ 24302766 (+)
LOC103045057 LOC108428617 coding downstream 2345 24317310 ~ 24336229 (+)
LOC103047809 grm1,LOC108428695,LOC107733655,LOC107692633 coding downstream 68913 24383878 ~ 24403591 (+)
LOC111193225 NA coding downstream 88725 24403690 ~ 24407033 (+)
LOC103021971 stxbp5,LOC108428698 coding downstream 103044 24418009 ~ 24458899 (+)
LOC103022677 LOC108428699 coding downstream 145609 24460574 ~ 24551484 (+)
G82838 NA non-coding upstream 175811 24136576 ~ 24138904 (+)
G82816 NA non-coding upstream 399256 23913129 ~ 23915459 (+)
G82814 NA non-coding upstream 406107 23908338 ~ 23908608 (+)
G82813 NA non-coding upstream 409320 23904860 ~ 23905395 (+)
G82785 kiaa0586 non-coding upstream 542598 23769525 ~ 23772117 (+)
G83071 NA non-coding downstream 34476 24349441 ~ 24350535 (+)
LOC111193226 NA non-coding downstream 42010 24356975 ~ 24367973 (+)
LOC111193227 NA non-coding downstream 257363 24572328 ~ 24576551 (+)
G83116 NA non-coding downstream 304730 24619695 ~ 24619937 (+)
G83120 lace1,lace1a,LOC108428707,LOC108269919,LOC108239053 non-coding downstream 315908 24630873 ~ 24635198 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other upstream 172483 24139389 ~ 24142232 (+)
G82811 psma3,LOC107729246,LOC107725600 other upstream 340740 23909682 ~ 23973975 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other upstream 436945 23875439 ~ 23877770 (+)
G82609 baz1a other upstream 1083397 23230430 ~ 23231318 (+)
G82488 NA other upstream 1956580 22357644 ~ 22358135 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 580929 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 619199 24934164 ~ 24936186 (+)
c9h8orf74 NA other downstream 715032 25029997 ~ 25034121 (+)
supt3h supt3h other downstream 845953 25160918 ~ 25329482 (+)
LOC103033015 LOC108423550,LOC108270308 other downstream 1604592 25919557 ~ 25975283 (+)

Expression


Co-expression Network