G83167


Basic Information

Item Value
gene id G83167
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24771882 ~ 24772793 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU112060
atatatatatatatatatatataaatataaatatgacacATTGCAGGGAGGACAGCATTTTAAAAagcgagaagagagagaagtgcACACTGCTGAAGGTTTTCTTTGGAAGCAGAACCATTTCCTGAACAGGCGGCTATGAAccaggctttttttttgtgtccccTGTGAACGTCAGCAGCGCAGTCCACTTAAAGAGTCCTGCAAAACATTCTAATAGAACTGCCTATCTAAGAGTTTtcagcaaaatatatattattggtaCCATATAAACATGCACACTCATTCTATGCCTAAACATAAACTAATACCTTAGTTTAATAACAATGCTGCCCTTCTGCAGTCTCAGCGACACATTGCAGGGTAATAAATGAGTTTCAGGGTCATTTGGGCCACTATCAGTTCTGCCAGCTTCAGGGTGGCTGTCTGCAAACAGAGAGTTATGATGCTGGCTATTAAACCACAGCTGCGTTCATCTTCTTGACAGGAATAATCAGGATGCTGGAAATGCAGGAGCTGCAGTTAGCCCATCTTCAAAATGGCAGCCCTGTGTATAGATACAGTATCATTCCTCCaggttttaatcattttattactaCACAGtcaaatcaaaatattaataatccaTTTTTTACACTCCTTGGCCACTTTTTCTGCTCCGTTGAACAAATAGGAGAACTTACAGATGCTAGTCCATCTGTTTATCAGCACACTTTGTTaacctcctttcaccctgttcttcaccccgcgctcactggggttctgtattctgtatttttctatgtttaatattttgcctgattctttgtcctgtgatcacgtctctgtaaagctgctttgtgccaacaccagttgtaaaaagtgctatacaaataaatttgatttgattctttaatgttttgctggtacaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112060 True 912 lncRNA 0.39 1 24771882 24772793

Neighbor

gene id symbol gene type direction distance location
fuca2 fuca2 coding upstream 829 24765981 ~ 24771053 (+)
LOC103045971 NA coding upstream 24077 24742969 ~ 24747805 (+)
LOC103030357 LOC108270045 coding upstream 29085 24737013 ~ 24742797 (+)
tp53i3 tp53i3 coding upstream 35505 24732177 ~ 24736377 (+)
LOC103029186 cenpo,LOC103029186 coding upstream 41864 24726218 ~ 24730018 (+)
LOC103032669 NA coding downstream 13 24772806 ~ 24793331 (+)
LOC103034484 LOC107576683 coding downstream 26239 24799032 ~ 24805385 (+)
LOC103033951 LOC108428726 coding downstream 35133 24807926 ~ 24813809 (+)
LOC103046279 NA coding downstream 42117 24814910 ~ 24826100 (+)
trnal-cag_10 NA coding downstream 54881 24827674 ~ 24827756 (+)
G83123 NA non-coding upstream 129227 24642392 ~ 24642655 (+)
G83121 NA non-coding upstream 135000 24636606 ~ 24636882 (+)
G83120 lace1,lace1a,LOC108428707,LOC108269919,LOC108239053 non-coding upstream 136684 24630873 ~ 24635198 (+)
G83116 NA non-coding upstream 151945 24619695 ~ 24619937 (+)
LOC111193227 NA non-coding upstream 195331 24572328 ~ 24576551 (+)
G83180 NA non-coding downstream 65737 24838530 ~ 24840128 (+)
G83295 NA non-coding downstream 120450 24893243 ~ 24893639 (+)
G83307 NA non-coding downstream 159126 24931919 ~ 24932539 (+)
G83354 NA non-coding downstream 355167 25127960 ~ 25187909 (+)
G83438 cdc5l,LOC107594083,LOC107552094 non-coding downstream 588934 25361727 ~ 25367281 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other upstream 629650 24139389 ~ 24142232 (+)
G82811 psma3,LOC107729246,LOC107725600 other upstream 797907 23909682 ~ 23973975 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other upstream 894112 23875439 ~ 23877770 (+)
G82609 baz1a other upstream 1540564 23230430 ~ 23231318 (+)
G82488 NA other upstream 2413747 22357644 ~ 22358135 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 123101 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 161371 24934164 ~ 24936186 (+)
c9h8orf74 NA other downstream 257204 25029997 ~ 25034121 (+)
supt3h supt3h other downstream 388125 25160918 ~ 25329482 (+)
LOC103033015 LOC108423550,LOC108270308 other downstream 1146764 25919557 ~ 25975283 (+)

Expression


Co-expression Network