G83279


Basic Information

Item Value
gene id G83279
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24813347 ~ 24813809 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU112211
tttttttttaggcttgCAATCAGATGGTTTGTAAAAAAAGGTACCTGTAGCTCCAAAGCTCTATAATTCTAATGaattatgaaatatataatCGTATAGCACATTTTTGCGTACTATGTGATGTAATAATCACACAATACCAGCTTTCACAGATTCTCACATACTTCCATCACCAGGATTATATTTCATTGCTAGGtttttctttttagtgtcttcttttCCTCTGTTCTCCACATCATCTATGGTCTCAGGAAGATCAACACCTTTCATTTCTGGCAACATTGTAACCAGTCCACTATATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112211 True 303 lncRNA 0.34 2 24813347 24813809

Neighbor

gene id symbol gene type direction distance location
LOC103033209 LOC105895699,LOC103033209,LOC102290137,LOC103363062,LOC105017734,LOC107377943,LOC108428727,LOC102203632,LOC101464058,LOC101076210,LOC106571413 coding downstream 16148 24794749 ~ 24797199 (-)
LOC103031209 tatdn3,LOC108428722,LOC107733563 coding downstream 50598 24759382 ~ 24762749 (-)
LOC103030890 si:dkey-36g24.3,LOC108428718,LOC108270043,LOC106607835 coding downstream 55127 24748054 ~ 24758220 (-)
LOC103029498 LOC108428715,LOC108270176 coding downstream 86949 24715124 ~ 24726398 (-)
LOC103028045 NA coding downstream 100922 24699912 ~ 24712425 (-)
LOC103035756 dus23,dusp23,LOC103035756,LOC108428728 coding upstream 12356 24826165 ~ 24828725 (-)
LOC103035024 NA coding upstream 17151 24830960 ~ 24846017 (-)
LOC103037621 LOC103037621,LOC108428732,LOC108270140,LOC107734000,LOC107717228,LOC107692934,LOC107552030,LOC107594120 coding upstream 69096 24882905 ~ 24891194 (-)
LOC107197685 LOC108441730,LOC108270472,LOC107653800,LOC107717246,LOC107594140,LOC107552087,LOC107734306 coding upstream 126229 24940038 ~ 24954966 (-)
LOC103038485 LOC108441717 coding upstream 146925 24960734 ~ 24966932 (-)
G83260 NA non-coding downstream 40605 24771882 ~ 24772742 (-)
G83259 fuca2 non-coding downstream 42304 24765935 ~ 24771043 (-)
G83236 NA non-coding downstream 49026 24763896 ~ 24764321 (-)
G83254 dnajc5gb,LOC108428719,LOC108270045 non-coding downstream 72348 24736704 ~ 24740999 (-)
G83059 LOC103045657,LOC108428691 non-coding downstream 538257 24271440 ~ 24275090 (-)
G83291 NA non-coding upstream 60447 24874256 ~ 24875186 (-)
G83294 NA non-coding upstream 68898 24882707 ~ 24882844 (-)
G83300 NA non-coding upstream 82087 24895896 ~ 24896616 (-)
G83309 NA non-coding upstream 118109 24931918 ~ 24932189 (-)
G83313 NA non-coding upstream 120368 24934177 ~ 24934642 (-)
LOC103026430 LOC108428707,LOC108269919,LOC107102228,LOC103379330,LOC101162185 other downstream 177466 24630879 ~ 24635881 (-)
cunh6orf183 zbtb24 other downstream 196731 24588941 ~ 24616616 (-)
G82991 LOC108428614,LOC108269476,LOC107734364,LOC107693224,LOC107589682 other downstream 795691 24012634 ~ 24017656 (-)
kiaa0586 NA other downstream 938946 23713376 ~ 23874401 (-)
sptssa sptssa other downstream 1624258 23110883 ~ 23189089 (-)
LOC103040243 tdh,LOC103040243,LOC108441731,LOC107561940,LOC107723287,LOC107589050,LOC107701506,LOC107746115,LOC105018021,LOC104922441 other upstream 220195 25034004 ~ 25041054 (-)
G83612 NA other upstream 1178690 25992499 ~ 26003685 (-)
cga cga other upstream 1620663 26434472 ~ 26470163 (-)
LOC103043566 LOC108423527,LOC108270165,LOC100330554,LOC107677688,LOC103153288,LOC103458816,LOC106945627,LOC103355980,LOC102293757 other upstream 3016819 27830628 ~ 27848444 (-)
G84215 NA other upstream 3530780 28344589 ~ 28356545 (-)

Expression


Co-expression Network