ephx2 (ephx2,LOC107733988,LOC107692411,LOC107653762)


Basic Information

Item Value
gene id ephx2
gene name ephx2,LOC107733988,LOC107692411,LOC107653762
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24895894 ~ 24924815 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU112242
tgtctctttttctgttgCATCAAGCAGATCCTGATGCCAGCGCTGATGGTGACTGCAGGGAAAGATAAAGTGCTTCTGCCCAGCTTCAGCACTGGCATGGAGAACATGATTCCTAATTTAACTAGAGGCCATATTGAAGAATGTGGACACTGGACCCAGATGGAGAGGCCAGCTGAACTCAATAAAATCATCATCTCTTGGCTGAAAGACACCCATGAGAAAGCATCCATATCATTCTCTCCAAAACTGTGAGATGACTCTTTATTTGGAAATGAAGTTTGGGAACGGACAACCTCAGCTTGGATACAGCAGCCCTTCATATTCAGTAatcattttctgctttttacaGTACTATGCACTAATAAAGCACTGCATTACTTCTCCACATGATAttagtttacttttaaaatgaactttaaattatgcattttaaatttcaaaccacacattttattaaaagcttTGTGCATTGCAAAACAATA
>XM_007252027.3
CATTAGCCTTCCCTCTAAACTCTGCTCTATATTAAACAAGTTTATAAGGTGACTTTCTGTCACTTATTCTTTACCGCACAGCCTCGGCATTCACAAACTTTCTCCTCGGGGTTAAAGCTCAATGTTTAAGGCTGTGTTTTTCGGGCTGTGGGGTGGGGTGGTCACCCCTCACCCGCTGCTGGCTTTCCGTAAAGTGGAAAACGCTCTCAAACTGCCAAGGGATTTCATTCTGAACACCATTCTGAAGGCAGGGAGTGAGGGTGCTGTGTTTCGAGCTGACCGAGGAAAGCTCACCCTTACACAGATGTTCCCTGAGCTGGAGGCTGAGTGTCAGAAGGAAGCTGCCAGTCAGGGACTCTCTCTGCCTGCCCACTTCTCAGCCCAGAAGCTCTTTGATGAGGTGGTTCAGGTGGAGTTCAACGGGCCGCTGCTGGATGCTGCTGCCACTCTTCAGCGCCAGGGCATAAGAACCTGTGTCCTGGCCAATATGTGGATTGATGACAGCCCTCAGAGGGACAGTATTGCTAAAATTCTCCATGTCTTGGAAAACCGCTTTGATCTGGTGGTGCGATCCAGCCAAATTGGGGCAAAGCTCCCTGAAGCTGCTGTGTTCCAGTCGGCCTTGGATCAATTGCATGTTAAACCCAAAGAGGCTCTCTGGTTGGATGTATCTGAGGAAAGTGTGAAGACAGCTGAGAGCTTGGGCATGGCTGCTGTTCACATAACTGAGATCAGTGAAGCAGTGAAGAAGATGGAAACACTTACTGGGATAAAGCTTACAGTTGAGCAGTTGCCACGTGCTTGTGATGCTGAGAAAGTCAGCCATGGATATGTTACTGTCAAGCCTGGGGTGAAGATCCATTATGTGGAGATGGGGGATGGGCCTCCTGTTCTGCTTTGCCATGGGTTCCCTGAAAGCTGGTATTCCTGGAGGTACCAGATTCCAGCTTTGGCTGATGCGGGGTTCAGGGTTATTGCTCCTGACATGAAAGGCTATGGTGACTCCTCTGCTCCAGCAGATATTGAGGAATATTCACAAGAAAATATTGTAAAGGATCTGGTGACGTTCATGGATAAGTTGGGTCTTGCTCAGGTTACTCTGTTTGGGCACGACTGGGGTGGTTCGGTGGCTTGGAACATGGCTCAGTGTCATCCAGAGAGACTGAGGGCTGTTGCTTCTCTCAACACTCCTCTATTTCGTGTTGATCCAGACACAAATCCAATGGAACGACTGAAGGCTATGCCCATTTTtgactatcaaatatactttcaGGAGCCTGGTGTGGCGGAGGCTGAGCTGGAGAGAAACCTGGCCAGGACTTTTAAACTGATGTTCACTGCTAGTAGTGAAAAAGGCCTTCTGAAAGGGGGCACTGCTGGAGTCTGTAAAAGAGGGGGGTTGTTTGTTGGGTCACCAGAGGATGTCCCCAGAAGCTCCATGCTAAGTGAGGAGGATCTGCAGTACTATATGCAGCAGTTCAGTAAGAGTGGCTTCAGGGGTCCTCTCAACTGGTATCGAAATGTGGAGAGGAACTGGCGCTGGCTGTGCTCAAGGCCAAGGGGCAAGATCCTGATGCCAGCGCTGATGGTGACTGCAGGGAAAGATAAAGTGCTTCTGCCCAGCTTCAGCACTGGCATGGAGAACATGATTCCTAATTTAACTAGAGGCCATATTGAAGAATGTGGACACTGGACCCAGATGGAGAGGCCAGCTGAACTCAATAAAATCATCATCTCTTGGCTGAAAGACACCCATGAGAAAGCATCCATATCATTCTCTCCAAAACTGTGAGATGACTCTTTATTTGGAAATGAAGTTTGGGAACGGACAACCTCAGCTTGGATACAGCAGCCCTTCATATTCAGTAatcattttctgctttttacaGTACTATGCACTAATAAAGCACTGCATTACTTCTCCACATGATAttagtttacttttaaaatgaactttaaattatgcattttaaatttcaaaccacacattttattaaaagcttTGTGCATTGCAAAACAA

Function

symbol description
ephx2 Enables epoxide hydrolase activity. Acts upstream of or within hematopoietic progenitor cell differentiation and venous blood vessel development. Predicted to be active in peroxisome. Is expressed in cardiovascular system; digestive system; neural tube; somite; and spinal cord. Human ortholog(s) of this gene implicated in coronary artery disease; familial hypercholesterolemia; and hypertension. Orthologous to human EPHX2 (epoxide hydrolase 2).

NR:

description
bifunctional epoxide hydrolase 2-like

GO:

id name namespace
GO:0002244 hematopoietic progenitor cell differentiation biological_process
GO:0060841 venous blood vessel development biological_process
GO:0004301 epoxide hydrolase activity molecular_function

KEGG:

id description
K08726 EPHX2; soluble epoxide hydrolase / lipid-phosphate phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
TU112242 False 482 lncRNA 0.39 3 24918425 24924815
XM_007252027.3 True 2020 mRNA 0.48 19 24895894 24924813

Neighbor

gene id symbol gene type direction distance location
ptk2b LOC108428731,LOC108270138 coding upstream 13142 24849576 ~ 24882752 (+)
trnal-cag_10 NA coding upstream 68138 24827674 ~ 24827756 (+)
LOC103046279 NA coding upstream 69794 24814910 ~ 24826100 (+)
LOC103033951 LOC108428726 coding upstream 82085 24807926 ~ 24813809 (+)
LOC103034484 LOC107576683 coding upstream 90509 24799032 ~ 24805385 (+)
gckr gckr coding downstream 56561 24981376 ~ 24997874 (+)
LOC103039108 NA coding downstream 73520 24998335 ~ 25008777 (+)
xkr6 xkr6,xkr6a,LOC108269486,LOC107693112 coding downstream 120898 25045713 ~ 25071105 (+)
enpp4 enpp4 coding downstream 162788 25087603 ~ 25095143 (+)
clic5 clic5,LOC105909474,LOC103355727 coding downstream 173224 25098039 ~ 25109750 (+)
G83295 NA non-coding upstream 2255 24893243 ~ 24893639 (+)
G83180 NA non-coding upstream 55766 24838530 ~ 24840128 (+)
G83167 NA non-coding upstream 123101 24771882 ~ 24772793 (+)
G83123 NA non-coding upstream 253239 24642392 ~ 24642655 (+)
G83121 NA non-coding upstream 259012 24636606 ~ 24636882 (+)
G83307 NA non-coding downstream 7104 24931919 ~ 24932539 (+)
G83354 NA non-coding downstream 203145 25127960 ~ 25187909 (+)
G83438 cdc5l,LOC107594083,LOC107552094 non-coding downstream 436912 25361727 ~ 25367281 (+)
G83440 cdc5l,LOC106599718 non-coding downstream 445436 25370251 ~ 25387590 (+)
G83441 NA non-coding downstream 453756 25378571 ~ 25379291 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other upstream 753662 24139389 ~ 24142232 (+)
G82811 psma3,LOC107729246,LOC107725600 other upstream 921919 23909682 ~ 23973975 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other upstream 1018124 23875439 ~ 23877770 (+)
G82609 baz1a other upstream 1664576 23230430 ~ 23231318 (+)
G82488 NA other upstream 2537759 22357644 ~ 22358135 (+)
LOC111193228 NA other downstream 9349 24934164 ~ 24936186 (+)
c9h8orf74 NA other downstream 105182 25029997 ~ 25034121 (+)
supt3h supt3h other downstream 236103 25160918 ~ 25329482 (+)
LOC103033015 LOC108423550,LOC108270308 other downstream 994742 25919557 ~ 25975283 (+)
G83602 NA other downstream 1310683 26235498 ~ 26253602 (+)

Expression


Co-expression Network