G83300


Basic Information

Item Value
gene id G83300
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24895896 ~ 24896616 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU112251
CCTGGCGCTGAAGAGTGGCAGCAGCATCCAGCAGCGGCCCGTTGAACTCCACCTGAACCACCTCATCAAAGAGCTTCTGGGCTGAGAAGTGGGCAGGCAGAGAGAGTCCCTGACTGGCAGCTTCCTTCTGACACTCAGCCTCCAGCTCAGGGAACATCTGTGTAAGGGTGAGCTTTCCTCGGTCAGCTCGAAACACAGCACCCTCACTCCCTGCCTTCAGAATGGTGTTCAGAATGAAATCCCTTGGCAGTTTGAGAGCGTTTTCCACTTTACGGAAAGCCAGCAGCGGGTGAGGGGTGACCACCCCACCCCACAGCCCGAAAAACACAGCCTTAAACATTGAGCTTTAACCCCGAGGAGAAAGTTTGTGAATGCCGAGGCTGTGCGGTAAAGAATAAGTGACAGAAAGTCACCTTATAAACTTGTTTAATATAGAGCAGAGTTTAGAGGGAAGGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112251 True 459 lncRNA 0.52 3 24895896 24896616

Neighbor

gene id symbol gene type direction distance location
LOC103037621 LOC103037621,LOC108428732,LOC108270140,LOC107734000,LOC107717228,LOC107692934,LOC107552030,LOC107594120 coding downstream 4702 24882905 ~ 24891194 (-)
LOC103035024 NA coding downstream 49879 24830960 ~ 24846017 (-)
LOC103035756 dus23,dusp23,LOC103035756,LOC108428728 coding downstream 67171 24826165 ~ 24828725 (-)
LOC103033209 LOC105895699,LOC103033209,LOC102290137,LOC103363062,LOC105017734,LOC107377943,LOC108428727,LOC102203632,LOC101464058,LOC101076210,LOC106571413 coding downstream 98697 24794749 ~ 24797199 (-)
LOC103031209 tatdn3,LOC108428722,LOC107733563 coding downstream 133147 24759382 ~ 24762749 (-)
LOC107197685 LOC108441730,LOC108270472,LOC107653800,LOC107717246,LOC107594140,LOC107552087,LOC107734306 coding upstream 43422 24940038 ~ 24954966 (-)
LOC103038485 LOC108441717 coding upstream 64118 24960734 ~ 24966932 (-)
LOC103038793 LOC103038793,LOC108441718,LOC108269503 coding upstream 72643 24969259 ~ 24978562 (-)
LOC103039713 NA coding upstream 112552 25009168 ~ 25030713 (-)
LOC103041368 NA coding upstream 176523 25073139 ~ 25086487 (-)
G83294 NA non-coding downstream 13052 24882707 ~ 24882844 (-)
G83291 NA non-coding downstream 20710 24874256 ~ 24875186 (-)
G83271 NA non-coding downstream 38040 24801327 ~ 24857856 (-)
G83279 NA non-coding downstream 82087 24813347 ~ 24813809 (-)
G83260 NA non-coding downstream 123154 24771882 ~ 24772742 (-)
G83309 NA non-coding upstream 35302 24931918 ~ 24932189 (-)
G83313 NA non-coding upstream 37561 24934177 ~ 24934642 (-)
G83316 NA non-coding upstream 39501 24936117 ~ 24936621 (-)
G83373 NA non-coding upstream 93202 24989818 ~ 24991371 (-)
G83375 NA non-coding upstream 99326 24995942 ~ 24996155 (-)
LOC103026430 LOC108428707,LOC108269919,LOC107102228,LOC103379330,LOC101162185 other downstream 260015 24630879 ~ 24635881 (-)
cunh6orf183 zbtb24 other downstream 279280 24588941 ~ 24616616 (-)
G82991 LOC108428614,LOC108269476,LOC107734364,LOC107693224,LOC107589682 other downstream 878240 24012634 ~ 24017656 (-)
kiaa0586 NA other downstream 1021495 23713376 ~ 23874401 (-)
sptssa sptssa other downstream 1706807 23110883 ~ 23189089 (-)
LOC103040243 tdh,LOC103040243,LOC108441731,LOC107561940,LOC107723287,LOC107589050,LOC107701506,LOC107746115,LOC105018021,LOC104922441 other upstream 137388 25034004 ~ 25041054 (-)
G83612 NA other upstream 1095883 25992499 ~ 26003685 (-)
cga cga other upstream 1537856 26434472 ~ 26470163 (-)
LOC103043566 LOC108423527,LOC108270165,LOC100330554,LOC107677688,LOC103153288,LOC103458816,LOC106945627,LOC103355980,LOC102293757 other upstream 2934012 27830628 ~ 27848444 (-)
G84215 NA other upstream 3447973 28344589 ~ 28356545 (-)

Expression


Co-expression Network