G83377


Basic Information

Item Value
gene id G83377
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24998451 ~ 24998768 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU112353
CCTTTGCCTCCAAACTGTCCACAGGTTTCACCAAGACTTTGGGTACGTAGCCTTCCTGATTCTTCACTGAGCATTTCCTTACATAAAGCCAGTGCTGGTTTTCTTCAATCACTTCAAGTATATCTCCTTTGTTGAGCTTCAGGTCTCTCAGGGTACGGCAGCGGTAATCGTAGAGGGAAGTCACTCGTATAGGCTTGTGTTGCTTTGGTTCTTCTTTACAGCACAGCCAACAGCAACATTTACAGCAAGAGCAGCCACAGTTGCCCATTTTCCACAACAGGTACCTGAGATCACCATGCCAGCAATTATAAAATGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112353 True 318 lncRNA 0.46 1 24998451 24998768

Neighbor

gene id symbol gene type direction distance location
LOC103038793 LOC103038793,LOC108441718,LOC108269503 coding downstream 19889 24969259 ~ 24978562 (-)
LOC103038485 LOC108441717 coding downstream 31519 24960734 ~ 24966932 (-)
LOC107197685 LOC108441730,LOC108270472,LOC107653800,LOC107717246,LOC107594140,LOC107552087,LOC107734306 coding downstream 43485 24940038 ~ 24954966 (-)
LOC103037621 LOC103037621,LOC108428732,LOC108270140,LOC107734000,LOC107717228,LOC107692934,LOC107552030,LOC107594120 coding downstream 107257 24882905 ~ 24891194 (-)
LOC103035024 NA coding downstream 152434 24830960 ~ 24846017 (-)
LOC103039713 NA coding upstream 10400 25009168 ~ 25030713 (-)
LOC103041368 NA coding upstream 74371 25073139 ~ 25086487 (-)
runx2 runx2,runx2a,LOC102312376,LOC107378134 coding upstream 134052 25132820 ~ 25171328 (-)
cdc5l cdc5l,LOC107594083 coding upstream 362950 25361718 ~ 25387594 (-)
LOC103042905 klhl29,LOC108441727,LOC108269491,LOC107733414,LOC107678777,LOC105909435 coding upstream 510120 25508888 ~ 25659843 (-)
G83376 NA non-coding downstream 347 24996987 ~ 24998104 (-)
G83375 NA non-coding downstream 2296 24995942 ~ 24996155 (-)
G83373 NA non-coding downstream 7080 24989818 ~ 24991371 (-)
G83316 NA non-coding downstream 61830 24936117 ~ 24936621 (-)
G83313 NA non-coding downstream 63809 24934177 ~ 24934642 (-)
G83378 NA non-coding upstream 553 24999321 ~ 24999788 (-)
G83380 NA non-coding upstream 2246 25001014 ~ 25002158 (-)
G83382 NA non-coding upstream 5041 25003809 ~ 25004092 (-)
G83383 NA non-coding upstream 6253 25005021 ~ 25006218 (-)
G83384 NA non-coding upstream 8845 25007613 ~ 25008757 (-)
LOC103026430 LOC108428707,LOC108269919,LOC107102228,LOC103379330,LOC101162185 other downstream 362570 24630879 ~ 24635881 (-)
cunh6orf183 zbtb24 other downstream 381835 24588941 ~ 24616616 (-)
G82991 LOC108428614,LOC108269476,LOC107734364,LOC107693224,LOC107589682 other downstream 980795 24012634 ~ 24017656 (-)
kiaa0586 NA other downstream 1124050 23713376 ~ 23874401 (-)
sptssa sptssa other downstream 1809362 23110883 ~ 23189089 (-)
LOC103040243 tdh,LOC103040243,LOC108441731,LOC107561940,LOC107723287,LOC107589050,LOC107701506,LOC107746115,LOC105018021,LOC104922441 other upstream 35236 25034004 ~ 25041054 (-)
G83612 NA other upstream 993731 25992499 ~ 26003685 (-)
cga cga other upstream 1435704 26434472 ~ 26470163 (-)
LOC103043566 LOC108423527,LOC108270165,LOC100330554,LOC107677688,LOC103153288,LOC103458816,LOC106945627,LOC103355980,LOC102293757 other upstream 2831860 27830628 ~ 27848444 (-)
G84215 NA other upstream 3345821 28344589 ~ 28356545 (-)

Expression


Co-expression Network