G83612


Basic Information

Item Value
gene id G83612
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 25992499 ~ 26003685 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU112655
CTTTTCGCGTACTCAAACTCGCCTACTGCGCATTCGGACACACTACCCGATCTCGCatactgcttttgcatactgtttagtatggaagtacgcgatttcggacgcagccCTCGTCTGAGGCTGACCACGCCcacccgccagcttcaagcgttCTTCGGTCATGGCGGAGCGACGGTTTGcagtgaacagcagcagcaggagGTTCCCCTGAGAAGCCCCTTTCCTTCCTCATCGGTGGATCCTCCCGGTGGGGTTGAAATGGGCATCACCTCTGAACTGGACCCTTTTGGATTCCCAACCTTCTTAAAGAAAGGAGGCATCAGGAATAGGGGGTGGCCCTCAAGGCACTGCAAGGACTCTTGCGGTGGTAATCTGCTCGGGCATCAGATGTCCGTTGTCAGACCAAGACCTGCTAGTGCTACAGACAGCCATTGACCCATCTGCTTCATTTGGTCATGACCTCAACATTCAGGCTCTTCAGTTCACACAGAAGTAGAAGTTGGTGGGCTTGTTCAGTAAGCCAGTGGATAACAGCTGGTACAGTCAGCATTTCTTGGTCCTGAAGATCACTTGGCTCCCCTGTTGGCAGGCCTTCAAGTTGGTCATCTGGAAAACAAGGGAGGAACAGCCATGTACAGAGGATTTTCCTGAAGAACCGTGAGGAGCTTTCACCAACACCCCACAACATCAGAGTCTCGCGCCTAGGAGCGCTGCCCTGGGGGTTGAAGGACATGAAAACAATGATTTTGTATTCTCCTGTGCTGCTTGAGATTTTTAGAACTGACAGGTTGATGTCAGACTTGCTtcaatttacacagattttagaCTGTATGATTTcacTGCTTAAAAAGCTTCTCTAGAAGTCAGTCCATATACATTATTTCTTGCAATGTTATCAAGCTGAACAGTTGATCTAAAGTTGAGGCCCCACTCCTGGAAGAACCTTGGTGCCAGTACACCCTGAGCAAGGCTCACAACTTTAAAATCCCCCAGCTGTTCTgaagtttaaaacatttatatgtttaaaatgttacacaAATGCAGATGACAAAATTTATACATACTTGAAATTGCTGCTGTCCAAATCATTCTGTGAGTATTTGGGAGACTTTCCTTTTCTGTCATCCTCAAAGAGATGTTCTATTCCTGCAATCGTCTataaaaggaggaagaaaaagttTGATCTTAATGCTGCATATAGTTGTGCAAATCGTAGGCATCTGCAACACCTGTTTAAGACTAGACTGTTTCTGTACACATGTAAGAACAAGAACATACTAGAACATATTAACTCACATTTAACAGTGCCGTAAAAAATAGGAATATTttgatttaaagtgtttaaaataat

Function

GO: NA

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU112655 True 1351 TUCP 0.45 7 25992499 26003685

Neighbor

gene id symbol gene type direction distance location
tmx4 LOC108423553 coding downstream 160387 25813873 ~ 25832112 (-)
hao1 hao1,LOC107678730,LOC107663152 coding downstream 180326 25792548 ~ 25812173 (-)
LOC103043229 napba,LOC106610947,LOC106599679,LOC108414144,LOC107594084,LOC107552889,LOC107738557,LOC108270395,LOC107678778,LOC108242979 coding downstream 319163 25666461 ~ 25673336 (-)
LOC103047496 NA coding downstream 327228 25662151 ~ 25665271 (-)
LOC103042905 klhl29,LOC108441727,LOC108269491,LOC107733414,LOC107678777,LOC105909435 coding downstream 332656 25508888 ~ 25659843 (-)
tpo tpo coding upstream 13653 26017338 ~ 26058503 (-)
sntg2 sntg2,LOC107663169,LOC107678740 coding upstream 57127 26060812 ~ 26131764 (-)
kcnk10 kcnk10,LOC107707802,LOC107552901,LOC103379602,LOC106601399 coding upstream 366358 26370043 ~ 26389258 (-)
orc3 orc3 coding upstream 431547 26435232 ~ 26448939 (-)
LOC103028387 NA coding upstream 448561 26452246 ~ 26465294 (-)
G83515 NA non-coding downstream 201658 25780772 ~ 25790841 (-)
G83510 gdf3 non-coding downstream 275030 25715157 ~ 25717469 (-)
G83493 mcm8,LOC107594086,LOC107738559,LOC107678783 non-coding downstream 308619 25682464 ~ 25683880 (-)
G83497 mcm8,LOC107594086,LOC107678783 non-coding downstream 310082 25677399 ~ 25682417 (-)
G83464 NA non-coding downstream 496816 25495166 ~ 25495683 (-)
G83616 NA non-coding upstream 4030 26007715 ~ 26030240 (-)
G83635 NA non-coding upstream 201301 26204986 ~ 26205385 (-)
G83643 NA non-coding upstream 274415 26278100 ~ 26278513 (-)
G83652 NA non-coding upstream 322354 26326039 ~ 26327285 (-)
G83694 NA non-coding upstream 389183 26392868 ~ 26394102 (-)
LOC103040243 tdh,LOC103040243,LOC108441731,LOC107561940,LOC107723287,LOC107589050,LOC107701506,LOC107746115,LOC105018021,LOC104922441 other downstream 951445 25034004 ~ 25041054 (-)
LOC103026430 LOC108428707,LOC108269919,LOC107102228,LOC103379330,LOC101162185 other downstream 1356618 24630879 ~ 24635881 (-)
cunh6orf183 zbtb24 other downstream 1375883 24588941 ~ 24616616 (-)
G82991 LOC108428614,LOC108269476,LOC107734364,LOC107693224,LOC107589682 other downstream 1974843 24012634 ~ 24017656 (-)
kiaa0586 NA other downstream 2118098 23713376 ~ 23874401 (-)
cga cga other upstream 430787 26434472 ~ 26470163 (-)
LOC103043566 LOC108423527,LOC108270165,LOC100330554,LOC107677688,LOC103153288,LOC103458816,LOC106945627,LOC103355980,LOC102293757 other upstream 1826943 27830628 ~ 27848444 (-)
G84215 NA other upstream 2340904 28344589 ~ 28356545 (-)
rps6kl1 rps6kl1 other upstream 2671913 28675598 ~ 28694982 (-)
G84392 NA other upstream 3071791 29075476 ~ 29076115 (-)

Expression


Co-expression Network