G83649


Basic Information

Item Value
gene id G83649
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 26310709 ~ 26310948 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU112700
CAGGTGTTTTCAaagtgtttgatttattttgtttgtatctTTTTGTATGTTAGAAATCAGTTATACgtttaatttcacatttttatccaatttttctccctaatttccaaagccaattacccaaacccactcattagggctccccctatcactagtgatgccccaataccaggagggtgaagactaacacatgcctcctctgatatatgtaaagtcagccactgcctctttttgaattgC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112700 True 240 lncRNA 0.38 1 26310709 26310948

Neighbor

gene id symbol gene type direction distance location
LOC103033987 plcb1,LOC103033987,LOC108423552,LOC107663155,LOC107678738 coding upstream 393865 25835140 ~ 25916844 (+)
LOC103021856 bmp2,LOC108414145,LOC108270435 coding upstream 585800 25718474 ~ 25724909 (+)
gdf3 gdf3 coding upstream 593263 25715058 ~ 25717446 (+)
crls1 crls1,LOC107663140,LOC107738554,LOC107678734,LOC103476593 coding upstream 619815 25684805 ~ 25690894 (+)
mcm8 mcm8,LOC107594086,LOC107678783 coding upstream 626871 25667699 ~ 25683838 (+)
LOC103041814 LOC108423416 coding downstream 17853 26328801 ~ 26330956 (+)
LOC103041516 NA coding downstream 20979 26331927 ~ 26335823 (+)
LOC103041211 LOC103041211,LOC108423415 coding downstream 40183 26351131 ~ 26352435 (+)
LOC103030701 NA coding downstream 46831 26357779 ~ 26360746 (+)
ptpn21 ptpn21 coding downstream 90139 26401087 ~ 26420310 (+)
G83601 NA non-coding upstream 75534 26234916 ~ 26235175 (+)
LOC111193229 NA non-coding upstream 317697 25984681 ~ 25993012 (+)
G83522 hao1 non-coding upstream 508257 25798460 ~ 25802452 (+)
G83456 NA non-coding upstream 773439 25517590 ~ 25537270 (+)
G83449 NA non-coding upstream 815049 25495158 ~ 25495660 (+)
G83661 NA non-coding downstream 28234 26339182 ~ 26339699 (+)
G83663 NA non-coding downstream 28883 26339831 ~ 26340272 (+)
G83672 NA non-coding downstream 111566 26422514 ~ 26423061 (+)
LOC111193231 NA non-coding downstream 196391 26507339 ~ 26565844 (+)
trnay-gua_9 NA non-coding downstream 197092 26508040 ~ 26508125 (+)
c9h14orf132 csgr16h14orf132,LOC108423442,LOC108269530,LOC108413331,LOC107582175 other upstream 5326 26275001 ~ 26305383 (+)
G83602 NA other upstream 57107 26235498 ~ 26253602 (+)
LOC103033015 LOC108423550,LOC108270308 other upstream 335426 25919557 ~ 25975283 (+)
supt3h supt3h other upstream 981227 25160918 ~ 25329482 (+)
c9h8orf74 NA other upstream 1276588 25029997 ~ 25034121 (+)
LOC103031022 LOC103031022,LOC108423548 other downstream 10237 26321185 ~ 26327338 (+)
spata7 NA other downstream 81942 26392890 ~ 26399267 (+)
fermt2 fermt2 other downstream 416875 26727823 ~ 26777488 (+)
fam98b NA other downstream 1504857 27815805 ~ 27822211 (+)
LOC103044189 LOC108423527,LOC107677688 other downstream 1513308 27824256 ~ 27831584 (+)

Expression


Co-expression Network