G83672


Basic Information

Item Value
gene id G83672
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 26422514 ~ 26423061 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU112730
gtccaatgtcagtgcagtgttttcccggaatattttacagcactttatgcttccctctgctgacaacttttatggcgatgcgatttcattttccagcaggacttggcacactggcTACAACTgccgaaagtaccaattggtcttataatattCTCTGAGAGACTCTGACTttagggttttcattggctgtaagccataatcatcaacaataaaagaaataaaaacttaaaatagatcactctgtgtgcaatacatatatatatatatatgatgagtttcacatttcgaaccgattttttaaaaatgcccTCGTCATTTTCTATGTACTACTACTGCACGAAAACCTACATATACTTTGGTAtgtatgtattgtttatttttgaaaGGGCATTTTTTGCTGCATGAGTAAACTCAGTATATAGGGCTAAAGAAACAGGAtgaagtagttagttagcttagtGTGTTTATTCTAATTGGACATATCAACAATACTCATTTTGCTAAAGAGGTTTTTGAATGTGGTTAACTTTAGTTCAGGACCTCCAgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112730 True 548 lncRNA 0.35 1 26422514 26423061

Neighbor

gene id symbol gene type direction distance location
ptpn21 ptpn21 coding upstream 2204 26401087 ~ 26420310 (+)
LOC103030701 NA coding upstream 61768 26357779 ~ 26360746 (+)
LOC103041211 LOC103041211,LOC108423415 coding upstream 70079 26351131 ~ 26352435 (+)
LOC103041516 NA coding upstream 86691 26331927 ~ 26335823 (+)
LOC103041814 LOC108423416 coding upstream 91558 26328801 ~ 26330956 (+)
LOC103029223 akirin2,LOC100499587,LOC100379102 coding downstream 2037 26425098 ~ 26434192 (+)
LOC103026145 LOC108270054,LOC108423543 coding downstream 51714 26474775 ~ 26484622 (+)
snx14 snx14 coding downstream 64972 26488033 ~ 26506512 (+)
bmp4 bmp4 coding downstream 181657 26604718 ~ 26613764 (+)
LOC103023862 ddhd1 coding downstream 270357 26693418 ~ 26716015 (+)
G83663 NA non-coding upstream 82242 26339831 ~ 26340272 (+)
G83661 NA non-coding upstream 82815 26339182 ~ 26339699 (+)
G83649 NA non-coding upstream 111566 26310709 ~ 26310948 (+)
G83601 NA non-coding upstream 187339 26234916 ~ 26235175 (+)
LOC111193229 NA non-coding upstream 429502 25984681 ~ 25993012 (+)
LOC111193231 NA non-coding downstream 84278 26507339 ~ 26565844 (+)
trnay-gua_9 NA non-coding downstream 84979 26508040 ~ 26508125 (+)
G83760 NA non-coding downstream 295917 26718978 ~ 26719365 (+)
G83759 NA non-coding downstream 296574 26719635 ~ 26723005 (+)
G83761 NA non-coding downstream 301278 26724339 ~ 26724613 (+)
spata7 NA other upstream 23247 26392890 ~ 26399267 (+)
LOC103031022 LOC103031022,LOC108423548 other upstream 95176 26321185 ~ 26327338 (+)
c9h14orf132 csgr16h14orf132,LOC108423442,LOC108269530,LOC108413331,LOC107582175 other upstream 117131 26275001 ~ 26305383 (+)
G83602 NA other upstream 168912 26235498 ~ 26253602 (+)
LOC103033015 LOC108423550,LOC108270308 other upstream 447231 25919557 ~ 25975283 (+)
fermt2 fermt2 other downstream 304762 26727823 ~ 26777488 (+)
fam98b NA other downstream 1392744 27815805 ~ 27822211 (+)
LOC103044189 LOC108423527,LOC107677688 other downstream 1401195 27824256 ~ 27831584 (+)
LOC107197841 NA other downstream 2547203 28970264 ~ 28970839 (+)
LOC103045392 NA other downstream 2576441 28999502 ~ 29025114 (+)

Expression


Co-expression Network