G83973


Basic Information

Item Value
gene id G83973
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 27704226 ~ 27704888 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU113110
ggcagggtgcctccatgtctatgttaccttctggctctctgcctttagttaggctgttttattcagttctgccggagtcatttgccacactctgataatgttttaatattctcagttttgcataaatccagtaaaaactaattccatctctctgctttcctccgagttactgactgcccacctgtctgacccgataccgatgttggaccctcaggctctcgcgtctcctgtccagccagactgatggaagtttctgaagtcagctcttctccaccaccaccacagatcagctgctcatcgaccatcttactctccactacagattacatccaagccattagtggcgctattacactcctgagtacataaaacctatatggatgtataaaagactttttaaattttaatttaaaagccgtttgaccagtggtaggatggtcccccctttaatgtgagtcttggtcctcccaaggtttcttcctcctcctgcagctctgagggagtttttccttgcctccgcgctcactgggggttctgtattctgtattttctatgtgtaatgttttgcctgattctttgtcctgtaatcatgtttctgtaaagctgctttgtgccaacacctgttgtaaaaagcgctatacaaataaatttgatttgatttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113110 True 663 lncRNA 0.44 1 27704226 27704888

Neighbor

gene id symbol gene type direction distance location
LOC111193234 NA coding downstream 68819 27632645 ~ 27635407 (-)
meis2 meis2 coding downstream 95584 27526742 ~ 27608642 (-)
dph6 dph6,LOC106512485 coding downstream 275425 27148597 ~ 27428801 (-)
aqr aqr coding downstream 563747 27079341 ~ 27140479 (-)
gjd2 gjd2 coding downstream 640392 27060524 ~ 27063834 (-)
otub2 otub2,ddx24 coding upstream 160657 27865545 ~ 27873706 (-)
LOC103043263 NA coding upstream 170260 27875148 ~ 27880315 (-)
fam181a fam181a coding upstream 190067 27894955 ~ 27897940 (-)
unc79 NA coding upstream 223666 27928554 ~ 27997121 (-)
LOC103039744 NA coding upstream 367971 28072859 ~ 28079529 (-)
G83957 NA non-coding downstream 89518 27613245 ~ 27614708 (-)
G83950 NA non-coding downstream 127560 27524295 ~ 27576666 (-)
G83951 NA non-coding downstream 181364 27522095 ~ 27522862 (-)
G83923 cunh15orf41,c9h15orf41 non-coding downstream 232220 27465259 ~ 27472006 (-)
G83922 cunh15orf41,c9h15orf41 non-coding downstream 254679 27428892 ~ 27449547 (-)
G84045 NA non-coding upstream 110962 27815850 ~ 27819864 (-)
G84063 NA non-coding upstream 148468 27853356 ~ 27855384 (-)
G84064 LOC103042318,LOC108423523 non-coding upstream 151387 27856275 ~ 27859160 (-)
G84083 NA non-coding upstream 293696 27998584 ~ 28005722 (-)
G84109 NA non-coding upstream 355129 28060017 ~ 28114357 (-)
cga cga other downstream 1234063 26434472 ~ 26470163 (-)
G83612 NA other downstream 1700541 25992499 ~ 26003685 (-)
LOC103040243 tdh,LOC103040243,LOC108441731,LOC107561940,LOC107723287,LOC107589050,LOC107701506,LOC107746115,LOC105018021,LOC104922441 other downstream 2663172 25034004 ~ 25041054 (-)
LOC103026430 LOC108428707,LOC108269919,LOC107102228,LOC103379330,LOC101162185 other downstream 3068345 24630879 ~ 24635881 (-)
cunh6orf183 zbtb24 other downstream 3087610 24588941 ~ 24616616 (-)
LOC103043566 LOC108423527,LOC108270165,LOC100330554,LOC107677688,LOC103153288,LOC103458816,LOC106945627,LOC103355980,LOC102293757 other upstream 125740 27830628 ~ 27848444 (-)
G84215 NA other upstream 639701 28344589 ~ 28356545 (-)
rps6kl1 rps6kl1 other upstream 970710 28675598 ~ 28694982 (-)
G84392 NA other upstream 1370588 29075476 ~ 29076115 (-)
G84579 nol10 other upstream 2103641 29808529 ~ 29810277 (-)

Expression


Co-expression Network