G84064 (LOC103042318,LOC108423523)


Basic Information

Item Value
gene id G84064
gene name LOC103042318,LOC108423523
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 27856275 ~ 27859160 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU113220
GGAAGAGACTGCCTGCAGAGTTGAAGAGAACTGCATGATACTATAAATACAGGAATATCTGACATTTTCACTTAAGCCTGAATAAAAATAACCTTATAACCTCCTATGTTATGTGCCAAACATTGTACTGATGCTTTCAAAAACAGATCTCACCCATTCAACTCCAACAGAAGTGAGATGTAGTATCTGGCACAACAACCTTAGCAGCAAATTCTTTATGTCCTTGTCAAAGTCGTTCAATTTGTTCCTGCTTCCAAGACACCAACTTCAATAATTGACTGTTCACATGCTGCCTAAAATGTATATCCCACCCAGTGTTCTTTACTTAATCTCACAGTAGTTTTAAAGTGTTGTTGGTCAGTGTATATGCAAGTATCTCCCTTTCCAATTCTTCCTAGAGATAAATGAAGGAAACCAGATAATATGGATATTAGTTTTAATCCCAGAGAAGACAGAAGTGAACATGATCAGAGCTGAAAAATAACTGATTCTTATCAGGGCACGATGAGATGGCAGCACTGGCTGATTCAGTACTTTGTGGGGTCAATCACTCTGCCCATGAAGAGCAGACTGTTGGTTGCTTCATGGTatataaagaagaagaaaggccTGTTCACAGTGAAGGTAGTCGGCATAGAGTATGCAGTGATTCCCACGGTTGTTGCTGCTGCAGCTACAGTGCCTTTCTCGTCCACTTCAATCACAGCTTTGTGCAGAACCTGAACACACAACATGAAGAATTAATAATAAGTGAAGAACagtttattatactgtacacaGTTTCTgtacttttatatattatatccaACTGAACTATGTAGGCGACACGTTATCATCCTGgccaacagtttttttattatcaacTATGAAATTAATGCCACTGCTGTAATGCTAAATCACTGCCTCTTCATTGGTCTGTTATTTCCTTTAGCAGCTGACCAAACCTGGCAGTTCTCTTTTAATAAGAGGTCATAGTTTCTtgaaaacatattaataaaatgcaCCATAATGACttggcaaaaatattttttacaatcgtctgtaaagttgcagttttggagatttattttgttttgcatgaCAGTGACATACAGACAGTAATCAGTATAATAAAGCAGCTATGTCAcatataaatattcacactgacCTGTGAGACTTTTATACCAGATTCCTGACTCATGCCTTTGAGGTTAGCCGAGTATGTGAAGACATTCTGAATTCCCATGGATGGAAGAATCTTGTGCAAAGAATATGACTGTTCCAATTTAAATTTGGGTATGTAGACTTCCAGTTTTCTTTTTTTTCAGGTTCTTGATCCAGTTTAGAAACCTCTCAGCATTTATTTCATCATCTATGATGGTATAATCAACATTGCTGTCAGGAAGGACAATGAGCATAGCTGCGCCACCCAAATAGGGCAGACGCAACACCTTAGCCTTGAGCTCGTCATCACTGGCAATGTAGAACTTATCTGTACTAAACATCATTGGCACCTGGACAATATTATATTTGTCTATATAAAAGCGACTTTTTTCAGTGTTGTTTGGGTTGAAAGGTCTCTCCCAGGCACCtggaaaaaaaaatggtattgATCAGCATCATCTGAGTCAGGGGTTCAATGCTGGACACTATCTCTTTCACTTTATCCCCAGTTTTCTTCCTCACATGTTTATTAATTGTCTCCTTACTGATGTCAGCTTTACCAAAGTCCACGTTTTCGACATCAGCATCAAAGAACTTTTTGATCTGATCACTGAAAGCCCTCTCTATTTGGAAATGCAGGTCCACGAAGAGTGCTGTTCCCTGGTCCAGTTTCAGCGCTCCGTCATGGGTGATGTTCCCCTGGAGGTGCTGGAAGAGCTGAGGAATGAGCTCAGGCTGCCCATTCTGCTCCAGCGTGTCCAGATTCAGCCCTGACAGGATTTGGCTGCGAGTGGAGTTCCTGGCTGCCAAAGATAGTGCGGCGAATGCTGTGGAAACACTCAGCGGCGAGAAGAAAATGTTGTTGTCGTGCTGGCTTGAAATCTTACGATAAAGGTTCATGGCAAAGTCTATATTCTTAAAGGTCAGATCAGTGATGTTAGGAGTTTCCTGAGTCTGGAGGCTAGACTTGAAAAaggaaacacaaataaaaaggaACAGCAGCACTCTGTACTCCATCATCGTCATGATAATCTTCTTTCAAGGTTTGA

Function

NR:

description
protein Z-dependent protease inhibitor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113220 True 2192 lncRNA 0.40 3 27856275 27859160

Neighbor

gene id symbol gene type direction distance location
LOC111193234 NA coding downstream 220868 27632645 ~ 27635407 (-)
meis2 meis2 coding downstream 247633 27526742 ~ 27608642 (-)
dph6 dph6,LOC106512485 coding downstream 427474 27148597 ~ 27428801 (-)
aqr aqr coding downstream 715796 27079341 ~ 27140479 (-)
gjd2 gjd2 coding downstream 792441 27060524 ~ 27063834 (-)
otub2 otub2,ddx24 coding upstream 6385 27865545 ~ 27873706 (-)
LOC103043263 NA coding upstream 15988 27875148 ~ 27880315 (-)
fam181a fam181a coding upstream 35795 27894955 ~ 27897940 (-)
unc79 NA coding upstream 69394 27928554 ~ 27997121 (-)
LOC103039744 NA coding upstream 213699 28072859 ~ 28079529 (-)
G84063 NA non-coding downstream 891 27853356 ~ 27855384 (-)
G84045 NA non-coding downstream 36411 27815850 ~ 27819864 (-)
G83973 NA non-coding downstream 151387 27704226 ~ 27704888 (-)
G83957 NA non-coding downstream 241567 27613245 ~ 27614708 (-)
G83950 NA non-coding downstream 279609 27524295 ~ 27576666 (-)
G84083 NA non-coding upstream 139424 27998584 ~ 28005722 (-)
G84109 NA non-coding upstream 200857 28060017 ~ 28114357 (-)
G84107 LOC108423515 non-coding upstream 208056 28067216 ~ 28072498 (-)
G84197 NA non-coding upstream 407010 28266170 ~ 28267487 (-)
G84229 NA non-coding upstream 561824 28420984 ~ 28424692 (-)
LOC103043566 LOC108423527,LOC108270165,LOC100330554,LOC107677688,LOC103153288,LOC103458816,LOC106945627,LOC103355980,LOC102293757 other downstream 7831 27830628 ~ 27848444 (-)
cga cga other downstream 1386112 26434472 ~ 26470163 (-)
G83612 NA other downstream 1852590 25992499 ~ 26003685 (-)
LOC103040243 tdh,LOC103040243,LOC108441731,LOC107561940,LOC107723287,LOC107589050,LOC107701506,LOC107746115,LOC105018021,LOC104922441 other downstream 2815221 25034004 ~ 25041054 (-)
LOC103026430 LOC108428707,LOC108269919,LOC107102228,LOC103379330,LOC101162185 other downstream 3220394 24630879 ~ 24635881 (-)
G84215 NA other upstream 485429 28344589 ~ 28356545 (-)
rps6kl1 rps6kl1 other upstream 816438 28675598 ~ 28694982 (-)
G84392 NA other upstream 1216316 29075476 ~ 29076115 (-)
G84579 nol10 other upstream 1949369 29808529 ~ 29810277 (-)
hpcal1 hpcal1,hpca,LOC107565203,LOC107702105,LOC107556378,LOC106607246 other upstream 1999817 29858977 ~ 29930575 (-)

Expression


Co-expression Network