G84298


Basic Information

Item Value
gene id G84298
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 28925610 ~ 28926176 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU113546
gaagggaaataatgggatagaggagtgaaggaggggaagaaggaaatgaggttagaagtagttagtgtgttagaggtgttaggagagtaagtgctcttttaagagctctgtcttcaggagtttcttaaagatagtgagagattctcctgatctggtagtagaaggtagtaagttagaggtgttaggagagtaagtgctctttgaagagctctgtcttcaggagtttattaaagatagcgagagattctcctgatctggtagtagaaggtagtaagttagaggtgttaggagagtaagtgctctttgaagagctctgtcttcaggagtttattaaagatagcgagagattctcctgatctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113546 True 361 lncRNA 0.41 2 28925610 28926176

Neighbor

gene id symbol gene type direction distance location
arel1 arel1,LOC107573237,LOC107744492,LOC107672354,LOC107704359 coding upstream 124371 28775149 ~ 28801239 (+)
LOC103029222 NA coding upstream 177182 28739241 ~ 28748428 (+)
dlst dlst,LOC107749530,LOC107702243,LOC103357959 coding upstream 249947 28662092 ~ 28675663 (+)
esrrb esrrb,LOC107678144,LOC106611051 coding upstream 365516 28428946 ~ 28560094 (+)
gpatch2l gpatch2l coding upstream 507805 28375537 ~ 28417805 (+)
adi1 adi1,LOC107753353 coding downstream 261399 29187575 ~ 29215673 (+)
eipr1 tssc1,LOC107753352,LOC107687834,LOC107723283,LOC107589760 coding downstream 338877 29265053 ~ 29324443 (+)
LOC103038403 myt1l coding downstream 488336 29414512 ~ 29625594 (+)
pxdn pxdn,LOC107680176,LOC107687838 coding downstream 700459 29626635 ~ 29716871 (+)
LOC103028385 LOC103028385 coding downstream 808437 29734613 ~ 29737276 (+)
G84296 NA non-coding upstream 100334 28823824 ~ 28825276 (+)
G84294 NA non-coding upstream 122289 28803114 ~ 28803321 (+)
G84291 fcf1,LOC107704360 non-coding upstream 152775 28770168 ~ 28772835 (+)
G84280 NA non-coding upstream 202559 28705893 ~ 28723051 (+)
G84264 NA non-coding upstream 337656 28587396 ~ 28587954 (+)
G84300 NA non-coding downstream 53297 28979473 ~ 28979778 (+)
G84307 NA non-coding downstream 86415 29012591 ~ 29018336 (+)
G84308 NA non-coding downstream 88841 29015017 ~ 29015457 (+)
G84313 NA non-coding downstream 101112 29027288 ~ 29027823 (+)
G84311 NA non-coding downstream 120567 29046743 ~ 29071659 (+)
LOC103044189 LOC108423527,LOC107677688 other upstream 1094026 27824256 ~ 27831584 (+)
fam98b NA other upstream 1103399 27815805 ~ 27822211 (+)
fermt2 fermt2 other upstream 2148122 26727823 ~ 26777488 (+)
spata7 NA other upstream 2526343 26392890 ~ 26399267 (+)
LOC103031022 LOC103031022,LOC108423548 other upstream 2598272 26321185 ~ 26327338 (+)
LOC107197841 NA other downstream 44088 28970264 ~ 28970839 (+)
LOC103045392 NA other downstream 73326 28999502 ~ 29025114 (+)
LOC111193240 NA other downstream 114803 29040979 ~ 29041607 (+)
LOC111193135 NA other downstream 117041 29043217 ~ 29043739 (+)
LOC107197844 NA other downstream 145715 29071891 ~ 29078898 (+)

Expression


Co-expression Network