G84307


Basic Information

Item Value
gene id G84307
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 29012591 ~ 29018336 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU113565
TATGAGCCTTATTGGTTTTGGTTATGCCACGGGTAATCCCACAATAGAAGAGGGTTTTAAGAAACAATTTGAAAtgaagagagaaggaaaaatgaAAGGAGATCTGATCATCTCTAAACTCGTCTCGTCTGATTCTGCTGTTTATTACTGTGCAGCCAGTCAGCACAGTGCTGCAGATTAATACAACCACCTTACTAAAACCCTCAACCTCAAACACACAGGAGCACAAACTGACTGTAGCTTCAAACTGTAGCTTCATGCTGCATTTCTGCTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113565 True 276 lncRNA 0.41 2 29012591 29018336

Neighbor

gene id symbol gene type direction distance location
LOC111193134 ltbp2 coding upstream 43563 28854283 ~ 28969028 (+)
arel1 arel1,LOC107573237,LOC107744492,LOC107672354,LOC107704359 coding upstream 211352 28775149 ~ 28801239 (+)
LOC103029222 NA coding upstream 264163 28739241 ~ 28748428 (+)
dlst dlst,LOC107749530,LOC107702243,LOC103357959 coding upstream 336928 28662092 ~ 28675663 (+)
esrrb esrrb,LOC107678144,LOC106611051 coding upstream 452497 28428946 ~ 28560094 (+)
adi1 adi1,LOC107753353 coding downstream 169239 29187575 ~ 29215673 (+)
eipr1 tssc1,LOC107753352,LOC107687834,LOC107723283,LOC107589760 coding downstream 246717 29265053 ~ 29324443 (+)
LOC103038403 myt1l coding downstream 396176 29414512 ~ 29625594 (+)
pxdn pxdn,LOC107680176,LOC107687838 coding downstream 608299 29626635 ~ 29716871 (+)
LOC103028385 LOC103028385 coding downstream 716277 29734613 ~ 29737276 (+)
G84300 NA non-coding upstream 32813 28979473 ~ 28979778 (+)
G84298 NA non-coding upstream 86415 28925610 ~ 28926176 (+)
G84296 NA non-coding upstream 187315 28823824 ~ 28825276 (+)
G84294 NA non-coding upstream 209270 28803114 ~ 28803321 (+)
G84291 fcf1,LOC107704360 non-coding upstream 239756 28770168 ~ 28772835 (+)
G84313 NA non-coding downstream 8952 29027288 ~ 29027823 (+)
G84311 NA non-coding downstream 28407 29046743 ~ 29071659 (+)
G84402 NA non-coding downstream 85395 29103731 ~ 29103978 (+)
G84403 NA non-coding downstream 92276 29110612 ~ 29112649 (+)
G84412 LOC107589761 non-coding downstream 142058 29160394 ~ 29162367 (+)
LOC107197841 NA other upstream 41752 28970264 ~ 28970839 (+)
LOC103044189 LOC108423527,LOC107677688 other upstream 1181007 27824256 ~ 27831584 (+)
fam98b NA other upstream 1190380 27815805 ~ 27822211 (+)
fermt2 fermt2 other upstream 2235103 26727823 ~ 26777488 (+)
spata7 NA other upstream 2613324 26392890 ~ 26399267 (+)
LOC111193240 NA other downstream 22643 29040979 ~ 29041607 (+)
LOC111193135 NA other downstream 24881 29043217 ~ 29043739 (+)
LOC107197844 NA other downstream 53555 29071891 ~ 29078898 (+)
LOC103025336 rhob,LOC103025336,LOC105888539,LOC105907285,LOC106607565 other downstream 949214 29967550 ~ 30015180 (+)
alg3 alg3,LOC107660011,LOC107730451,LOC107749127,LOC107557882,LOC107692886,LOC107600115 other downstream 1588421 30606757 ~ 30615062 (+)

Expression


Co-expression Network