G84313


Basic Information

Item Value
gene id G84313
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 29027288 ~ 29027823 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU113578
ccgcgaggcagccctcaggggcggggttattcaaatgagtaggcggtctctccacagcgtttctccctcctctggtctttactgcgcagactctggtctctgaatcgccaaaatggcggaagattttggcttcattttcattgaatgaatgggaacggcgacacggcgtccatctttatatacagtctatggtctgtACGCTCCAGCATTTCCATTCTGTTTCTGTGCTTTTCTGgataacatttctttaaaaaaacatgctgtCATCAGggGAATCTTCAGCTCAGCGAGTGTTCCAGTCACCAGCTTCAGCCATGGCTCCTCCCGGAGATAATGCTATCTTCCACTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113578 True 352 lncRNA 0.49 2 29027288 29027823

Neighbor

gene id symbol gene type direction distance location
LOC111193134 ltbp2 coding upstream 58260 28854283 ~ 28969028 (+)
arel1 arel1,LOC107573237,LOC107744492,LOC107672354,LOC107704359 coding upstream 226049 28775149 ~ 28801239 (+)
LOC103029222 NA coding upstream 278860 28739241 ~ 28748428 (+)
dlst dlst,LOC107749530,LOC107702243,LOC103357959 coding upstream 351625 28662092 ~ 28675663 (+)
esrrb esrrb,LOC107678144,LOC106611051 coding upstream 467194 28428946 ~ 28560094 (+)
adi1 adi1,LOC107753353 coding downstream 159752 29187575 ~ 29215673 (+)
eipr1 tssc1,LOC107753352,LOC107687834,LOC107723283,LOC107589760 coding downstream 237230 29265053 ~ 29324443 (+)
LOC103038403 myt1l coding downstream 386689 29414512 ~ 29625594 (+)
pxdn pxdn,LOC107680176,LOC107687838 coding downstream 598812 29626635 ~ 29716871 (+)
LOC103028385 LOC103028385 coding downstream 706790 29734613 ~ 29737276 (+)
G84307 NA non-coding upstream 8952 29012591 ~ 29018336 (+)
G84308 NA non-coding upstream 11831 29015017 ~ 29015457 (+)
G84300 NA non-coding upstream 47510 28979473 ~ 28979778 (+)
G84298 NA non-coding upstream 101112 28925610 ~ 28926176 (+)
G84296 NA non-coding upstream 202012 28823824 ~ 28825276 (+)
G84311 NA non-coding downstream 18920 29046743 ~ 29071659 (+)
G84402 NA non-coding downstream 75908 29103731 ~ 29103978 (+)
G84403 NA non-coding downstream 82789 29110612 ~ 29112649 (+)
G84412 LOC107589761 non-coding downstream 132571 29160394 ~ 29162367 (+)
G84414 LOC108269999,LOC108423477,LOC107570253,LOC107684238,LOC107753355 non-coding downstream 144983 29172806 ~ 29175987 (+)
LOC103045392 NA other upstream 2174 28999502 ~ 29025114 (+)
LOC107197841 NA other upstream 56449 28970264 ~ 28970839 (+)
LOC103044189 LOC108423527,LOC107677688 other upstream 1195704 27824256 ~ 27831584 (+)
fam98b NA other upstream 1205077 27815805 ~ 27822211 (+)
fermt2 fermt2 other upstream 2249800 26727823 ~ 26777488 (+)
LOC111193240 NA other downstream 13156 29040979 ~ 29041607 (+)
LOC111193135 NA other downstream 15394 29043217 ~ 29043739 (+)
LOC107197844 NA other downstream 44068 29071891 ~ 29078898 (+)
LOC103025336 rhob,LOC103025336,LOC105888539,LOC105907285,LOC106607565 other downstream 939727 29967550 ~ 30015180 (+)
alg3 alg3,LOC107660011,LOC107730451,LOC107749127,LOC107557882,LOC107692886,LOC107600115 other downstream 1578934 30606757 ~ 30615062 (+)

Expression


Co-expression Network