G84392


Basic Information

Item Value
gene id G84392
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 29075476 ~ 29076115 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU113680
CTATAATTactaactaattattaattgatgctacattttaatatttaagaagATTGATAATACGAATGAATTTAGTCAATTTCgacattaattaaaattaaaatattataattattaataattaaataattaaggcAGGTCGTACTGATGGTGACCCTTCAGAAAACTGTCCAGAAAAAGATACAGCAAGGCCAGAGATGGGAAGGCTTGATCTAGctgtgtttacagtgtatttatgtatatatgtgcgtACTGTACCTTTTGGTTTTGTTATGGTATCATTACAATTTGTTATTTCTTGTCTGTTGTGAAAATGAACAATGCAAGTGAAGTTATTCATGAGATCGTCCCAAACTGTTTTCTCCACGAGCAGTCTGCTGGACATGCTGTAGAACTTTGTTTCTGGATCTTGTACAGCGTAAAGGTCTGTAGCAACTCCATCGGCTATTTCATTCCCGTTTATCTGCCAGGAAAAATTAACGTGGTTTGGATAGAACTTCTTGGCCAGACACACCAAAGTCACGTTCGTTGTTGTACTGTTGCAGTACTCTCTTGGTGAAGGTCGCAGCACAGTGACTGTGGGTTCGGTTATGGGTATATTGGgatcttgaaaaaaaatgtaagaagtgaAAAATCTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113680 True 640 TUCP 0.36 1 29075476 29076115

Neighbor

gene id symbol gene type direction distance location
fcf1 fcf1,LOC107704360,LOC107672355,LOC106589732 coding downstream 302297 28770163 ~ 28773179 (-)
vash1 vash1 coding downstream 307676 28751256 ~ 28767800 (-)
lrrc74a lrrc74a,LOC107678137 coding downstream 337982 28728246 ~ 28737494 (-)
LOC111193238 LOC108423409 coding downstream 351024 28722068 ~ 28724452 (-)
LOC111193239 LOC108423410 coding downstream 356426 28716080 ~ 28719050 (-)
papln papln,LOC106611425,LOC107570257 coding upstream 35853 29111968 ~ 29157529 (-)
LOC103047839 psen1,LOC108423477,LOC108269999,LOC107684238,LOC107687832 coding upstream 89233 29165348 ~ 29185929 (-)
LOC111193242 NA coding upstream 112521 29188636 ~ 29199049 (-)
trappc12 trappc12 coding upstream 140605 29216720 ~ 29264941 (-)
LOC103027977 NA coding upstream 670682 29746797 ~ 29755420 (-)
G84365 NA non-coding downstream 95698 28979483 ~ 28979778 (-)
G84351 NA non-coding downstream 254689 28820303 ~ 28820787 (-)
G84332 NA non-coding downstream 331856 28742595 ~ 28743620 (-)
G84265 NA non-coding downstream 487378 28587380 ~ 28588098 (-)
G84263 NA non-coding downstream 506757 28568471 ~ 28568719 (-)
G84399 NA non-coding upstream 9780 29085895 ~ 29086405 (-)
G84400 NA non-coding upstream 10995 29087110 ~ 29087465 (-)
G84401 NA non-coding upstream 18906 29095021 ~ 29095391 (-)
G84436 NA non-coding upstream 32797 29108912 ~ 29109133 (-)
G84442 adi1,LOC107753353 non-coding upstream 111487 29187602 ~ 29215690 (-)
rps6kl1 rps6kl1 other downstream 380494 28675598 ~ 28694982 (-)
G84215 NA other downstream 718931 28344589 ~ 28356545 (-)
LOC103043566 LOC108423527,LOC108270165,LOC100330554,LOC107677688,LOC103153288,LOC103458816,LOC106945627,LOC103355980,LOC102293757 other downstream 1227032 27830628 ~ 27848444 (-)
cga cga other downstream 2605313 26434472 ~ 26470163 (-)
G83612 NA other downstream 3071791 25992499 ~ 26003685 (-)
G84579 nol10 other upstream 732414 29808529 ~ 29810277 (-)
hpcal1 hpcal1,hpca,LOC107565203,LOC107702105,LOC107556378,LOC106607246 other upstream 782862 29858977 ~ 29930575 (-)
G84663 LOC100707891,LOC103372284 other upstream 932512 30008627 ~ 30074937 (-)
map6d1 LOC108428296 other upstream 1257923 30334038 ~ 30355720 (-)
LOC103036386 camk2n2,LOC107659987,LOC107557885 other upstream 1503828 30579943 ~ 30583821 (-)

Expression


Co-expression Network