G84579 (nol10)


Basic Information

Item Value
gene id G84579
gene name nol10
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 29808529 ~ 29810277 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU113916
ATTATGCCTAAAAAGGAATTGGAACAAAGTCTTGtaacttatttttgttttacaatgcctttcttaaaaatgtaaagtggCAAAATTAAAACCCAACTCACTTTTGCACCTTCTGTTTGCGTGCAACATCGCCAAAGCTGCGAAACTCCTCGCCGGTTTTGATCTGGTAGAAccggggttggctccgcccctgtgCCTGGGACTGCTGGGAGCTCCCAGCTGGATCTGAACTCTGCAGGTTGGTGTTGCGGTCCTGCTTCTTCCTCTCATTAAACCTGCGCTGCCTCTCCTCAGCCCTTATGAGGCGCCGCTGCTCCCGCACCTCCTCCACCCAACTTTTATCATCGTCAGAGCTCTCCTCTTCTTCTGAACTGGCCCGGCCCTCCAGCTCCTCATCCTCCTGATCTTCCTGCTGTGATGTGCCTCCTTCTCCACCAACTGCTGcagtttcttcctcctctgctGGCCAACCTTGGAGACGATGGGGTTGAGCAATCGGAACTCCTCGCTACGCTCATCAACTTGGTAGTCTGGGTTCTCAAACATCATCTTGAAACGATCGTCACGGAGAATGCTGGTGGCACCCTTGGCTTTCTTCTTCTTGGCAGCACTCAGAGCATCTTCATTATCTCCCTCCTCCATCAGCTTAATAGCGAGCTCTTTATTCACCTTGGGAAGTTTCTTAAGCTGGACTCGCTGAACTCTCGACTCCTCAATTTTCTGGCGAAT

Function

symbol description
nol10 Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in nucleus. Predicted to be part of small-subunit processome. Predicted to be active in nucleolus. Orthologous to human NOL10 (nucleolar protein 10).

NR:

description
PREDICTED: nucleolar protein 10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113916 True 729 TUCP 0.50 4 29808529 29810277

Neighbor

gene id symbol gene type direction distance location
LOC103027342 NA coding downstream 23704 29766869 ~ 29784825 (-)
LOC103027977 NA coding downstream 53109 29746797 ~ 29755420 (-)
trappc12 trappc12 coding downstream 543588 29216720 ~ 29264941 (-)
LOC111193242 NA coding downstream 609480 29188636 ~ 29199049 (-)
LOC103047839 psen1,LOC108423477,LOC108269999,LOC107684238,LOC107687832 coding downstream 622600 29165348 ~ 29185929 (-)
sdc1 NA coding upstream 149046 29959323 ~ 29977998 (-)
hs1bp3 NA coding upstream 260662 30070939 ~ 30081434 (-)
trnas-aga_9 NA coding upstream 270375 30080652 ~ 30080733 (-)
ltbp2 NA coding upstream 275141 30085418 ~ 30141147 (-)
LOC103031662 acsm3,LOC108428295,LOC107749205,LOC107682913 coding upstream 551949 30362226 ~ 30395217 (-)
G84571 nol10 non-coding downstream 16217 29785855 ~ 29792312 (-)
G84566 NA non-coding downstream 45969 29762195 ~ 29762560 (-)
G84541 NA non-coding downstream 66041 29741985 ~ 29742488 (-)
G84540 NA non-coding downstream 70478 29737301 ~ 29738051 (-)
G84537 NA non-coding downstream 85668 29722626 ~ 29722861 (-)
G84587 NA non-coding upstream 45156 29855433 ~ 29855903 (-)
G84592 NA non-coding upstream 122218 29932495 ~ 29932712 (-)
G84649 NA non-coding upstream 136387 29946664 ~ 30015122 (-)
G84664 NA non-coding upstream 208114 30018391 ~ 30019249 (-)
G84682 NA non-coding upstream 333554 30143831 ~ 30144044 (-)
G84392 NA other downstream 732414 29075476 ~ 29076115 (-)
rps6kl1 rps6kl1 other downstream 1113547 28675598 ~ 28694982 (-)
G84215 NA other downstream 1451984 28344589 ~ 28356545 (-)
LOC103043566 LOC108423527,LOC108270165,LOC100330554,LOC107677688,LOC103153288,LOC103458816,LOC106945627,LOC103355980,LOC102293757 other downstream 1960085 27830628 ~ 27848444 (-)
cga cga other downstream 3338366 26434472 ~ 26470163 (-)
hpcal1 hpcal1,hpca,LOC107565203,LOC107702105,LOC107556378,LOC106607246 other upstream 48700 29858977 ~ 29930575 (-)
G84663 LOC100707891,LOC103372284 other upstream 198350 30008627 ~ 30074937 (-)
map6d1 LOC108428296 other upstream 523761 30334038 ~ 30355720 (-)
LOC103036386 camk2n2,LOC107659987,LOC107557885 other upstream 769666 30579943 ~ 30583821 (-)
mrpl34 mrpl34 other upstream 1009842 30820119 ~ 30822698 (-)

Expression


Co-expression Network