G84694


Basic Information

Item Value
gene id G84694
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 30249542 ~ 30249865 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU114061
attactttgtagatacaagcgcagctggttaaacacaattttttctagGATTTTGGCTATAAAGGAAAGATTAGAAATTGGTCTATAATTAGCAAGCTCGCGGGGGTCCAGATTTGGCTTTTTGATAATGGGCTTAATGACCGCCAATTTAAGAGAATTGGGTACGTAGCCCATGCTAAGGGATGAATTTACTATTTCTAGTAATGATTTTCCCACCTTTGGCAGTGCCTGTTTCAATAATTGTGTGGGTACTGGATCTAATATACATGATGTTGATTTTGATGAGTTAATTACACTAAGTAAATCTTTTTCTGTAACCGGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114061 True 324 lncRNA 0.37 1 30249542 30249865

Neighbor

gene id symbol gene type direction distance location
LOC103029649 klhl24,LOC107659963,LOC107721788,LOC107663692,LOC107721905 coding upstream 11017 30196717 ~ 30238525 (+)
LOC103031974 NA coding upstream 59372 30189061 ~ 30190170 (+)
LOC103030290 NA coding upstream 64730 30180920 ~ 30184812 (+)
mterf4 NA coding upstream 70516 30173586 ~ 30179026 (+)
pask LOC107557849 coding upstream 76400 30148259 ~ 30173142 (+)
yeats2 yeats2,LOC107578903 coding downstream 7927 30257792 ~ 30327152 (+)
LOC103031349 ece2 coding downstream 175845 30425710 ~ 30563794 (+)
LOC111193145 NA coding downstream 377982 30627847 ~ 30631632 (+)
LOC103037625 LOC103037625 coding downstream 463739 30713604 ~ 30746863 (+)
rpp40 NA coding downstream 633443 30883308 ~ 30892684 (+)
G84693 NA non-coding upstream 60 30249026 ~ 30249482 (+)
G84692 NA non-coding upstream 1305 30247456 ~ 30248237 (+)
G84685 NA non-coding upstream 5600 30185883 ~ 30243942 (+)
G84691 NA non-coding upstream 25164 30219138 ~ 30224378 (+)
G84623 NA non-coding upstream 176645 30070957 ~ 30072897 (+)
G84695 NA non-coding downstream 27 30249892 ~ 30253283 (+)
G84697 NA non-coding downstream 62141 30312006 ~ 30331109 (+)
G84711 NA non-coding downstream 117312 30367177 ~ 30367953 (+)
G84714 acsm3,LOC108428295,LOC107749205,LOC107660274 non-coding downstream 120348 30370213 ~ 30375082 (+)
G84727 acsm3,LOC108428295 non-coding downstream 142475 30392340 ~ 30415593 (+)
LOC103025336 rhob,LOC103025336,LOC105888539,LOC105907285,LOC106607565 other upstream 234362 29967550 ~ 30015180 (+)
LOC107197844 NA other upstream 1170644 29071891 ~ 29078898 (+)
LOC111193135 NA other upstream 1205803 29043217 ~ 29043739 (+)
LOC111193240 NA other upstream 1207935 29040979 ~ 29041607 (+)
LOC103045392 NA other upstream 1224428 28999502 ~ 29025114 (+)
alg3 alg3,LOC107660011,LOC107730451,LOC107749127,LOC107557882,LOC107692886,LOC107600115 other downstream 356892 30606757 ~ 30615062 (+)
pnisr pnisr,LOC102782257 other downstream 1205119 31454984 ~ 31469556 (+)
LOC103034273 LOC103034273,LOC108415529 other downstream 1499838 31749703 ~ 31805403 (+)
G85189 NA other downstream 1573721 31823586 ~ 31824388 (+)
LOC103035447 vegfa,vegf,LOC106584182 other downstream 1949318 32199183 ~ 32218762 (+)

Expression


Co-expression Network