G85189


Basic Information

Item Value
gene id G85189
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 31823586 ~ 31824388 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU114720
AGAATGCTTATTTATTATCTTAGGAAATTAAAATTATCTTataaaataatgctaaaaacaaacacacacacatttaataacTATGTCCCATTCAGTGTAAATCACAGCAATGTTTCACCAAGACAGTCTAGACCACCAGTCTTCCATTTCCAAACAGGAACATCAGGGAATTCTCTCAGCACGTAATGTTCTGGAGTTCGCAATACGTTCCCGTTTCTCCTCTGGAGTCAACACCCCCTCTGCCGTGACCACCTGGTACTGTGTATGTTTGAGGTGTCCGGGAAACTTGCGCATGCGGCTGACGGAAGCTGCAGCAGTGCTGGGGTTTAGTAGCTTCCTCATCTCTCCTGGAGGACAGCCTGGATCCAGCAgaagcaaacacacactcccATTCTTCCGCTCCTCCACTCCCACGATGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114720 True 421 TUCP 0.46 2 31823586 31824388

Neighbor

gene id symbol gene type direction distance location
rwdd1 rwdd1,LOC107700695,LOC107587776,LOC107552826,LOC107704860 coding upstream 3734 31812267 ~ 31819852 (+)
mms22l mms22l coding upstream 64046 31712784 ~ 31759540 (+)
fbxl4 fbxl4,LOC107587770,LOC107716847 coding upstream 282671 31524951 ~ 31540915 (+)
faxc faxc coding upstream 320995 31480632 ~ 31502591 (+)
coq3 NA coding upstream 344689 31472138 ~ 31478897 (+)
kpna5 kpna5,LOC107552832,LOC107711738,LOC107716841 coding downstream 10960 31835348 ~ 31849464 (+)
LOC103038892 NA coding downstream 595744 32420132 ~ 32425312 (+)
LOC103038371 NA coding downstream 602638 32427026 ~ 32430265 (+)
LOC103035585 LOC108423467 coding downstream 904731 32729119 ~ 32923000 (+)
LOC103035281 NA coding downstream 1218457 33042845 ~ 33057697 (+)
G85054 NA non-coding upstream 279384 31543469 ~ 31544202 (+)
G85052 NA non-coding upstream 315531 31507081 ~ 31508055 (+)
G85036 NA non-coding upstream 445535 31372531 ~ 31378051 (+)
G85025 NA non-coding upstream 467569 31269940 ~ 31356017 (+)
G85026 NA non-coding upstream 559532 31261549 ~ 31264054 (+)
G85277 NA non-coding downstream 150527 31974915 ~ 31975302 (+)
G85282 NA non-coding downstream 173945 31998333 ~ 31998653 (+)
LOC111193246 NA non-coding downstream 177466 32001854 ~ 32014439 (+)
G85279 NA non-coding downstream 217479 32041867 ~ 32046810 (+)
G85304 NA non-coding downstream 260815 32085203 ~ 32085744 (+)
LOC103034273 LOC103034273,LOC108415529 other upstream 18183 31749703 ~ 31805403 (+)
pnisr pnisr,LOC102782257 other upstream 354030 31454984 ~ 31469556 (+)
alg3 alg3,LOC107660011,LOC107730451,LOC107749127,LOC107557882,LOC107692886,LOC107600115 other upstream 1208524 30606757 ~ 30615062 (+)
LOC103025336 rhob,LOC103025336,LOC105888539,LOC105907285,LOC106607565 other upstream 1808406 29967550 ~ 30015180 (+)
LOC107197844 NA other upstream 2744688 29071891 ~ 29078898 (+)
LOC103035447 vegfa,vegf,LOC106584182 other downstream 374795 32199183 ~ 32218762 (+)
LOC103037843 pnrc2,LOC108441235 other downstream 611829 32436217 ~ 32441318 (+)
G85740 zdhhc14 other downstream 2922426 34746814 ~ 34800377 (+)
tfb1m tfb1m,cldn20,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299 other downstream 3463827 35288215 ~ 35339832 (+)
LOC111193254 NA other downstream 3812422 35636810 ~ 35658087 (+)

Expression


Co-expression Network