G85282


Basic Information

Item Value
gene id G85282
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 31998333 ~ 31998653 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU114833
gcggaaggcaggatacaccctggacaggccgccaatccatcgcagggcagacagacacagacagacacattcactcacacactcacacctaaggggcaatttcaatcaagttccaattagcctgaacgtgccgtctttggactgtgggaggaaaccggaggaacccggaggaaacccacgcagacacggggagaacgtgcaaactccacacagaaagacccgggtcgccccagccgggaatcaaacccaggccgtcttgctgtgaggcagaggtgctacccactgcgccaccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114833 True 293 lncRNA 0.59 2 31998333 31998653

Neighbor

gene id symbol gene type direction distance location
kpna5 kpna5,LOC107552832,LOC107711738,LOC107716841 coding upstream 148869 31835348 ~ 31849464 (+)
rwdd1 rwdd1,LOC107700695,LOC107587776,LOC107552826,LOC107704860 coding upstream 178481 31812267 ~ 31819852 (+)
mms22l mms22l coding upstream 238793 31712784 ~ 31759540 (+)
fbxl4 fbxl4,LOC107587770,LOC107716847 coding upstream 457418 31524951 ~ 31540915 (+)
faxc faxc coding upstream 495742 31480632 ~ 31502591 (+)
LOC103038892 NA coding downstream 421479 32420132 ~ 32425312 (+)
LOC103038371 NA coding downstream 428373 32427026 ~ 32430265 (+)
LOC103035585 LOC108423467 coding downstream 730466 32729119 ~ 32923000 (+)
LOC103035281 NA coding downstream 1044192 33042845 ~ 33057697 (+)
c9h2orf71 NA coding downstream 1062530 33061183 ~ 33071966 (+)
G85277 NA non-coding upstream 23031 31974915 ~ 31975302 (+)
G85054 NA non-coding upstream 454131 31543469 ~ 31544202 (+)
G85052 NA non-coding upstream 490278 31507081 ~ 31508055 (+)
G85036 NA non-coding upstream 620282 31372531 ~ 31378051 (+)
G85025 NA non-coding upstream 642316 31269940 ~ 31356017 (+)
LOC111193246 NA non-coding downstream 3201 32001854 ~ 32014439 (+)
G85279 NA non-coding downstream 43214 32041867 ~ 32046810 (+)
G85304 NA non-coding downstream 86550 32085203 ~ 32085744 (+)
G85310 NA non-coding downstream 130446 32129099 ~ 32129413 (+)
G85316 NA non-coding downstream 172964 32171617 ~ 32171851 (+)
G85189 NA other upstream 173945 31823586 ~ 31824388 (+)
LOC103034273 LOC103034273,LOC108415529 other upstream 192930 31749703 ~ 31805403 (+)
pnisr pnisr,LOC102782257 other upstream 528777 31454984 ~ 31469556 (+)
alg3 alg3,LOC107660011,LOC107730451,LOC107749127,LOC107557882,LOC107692886,LOC107600115 other upstream 1383271 30606757 ~ 30615062 (+)
LOC103025336 rhob,LOC103025336,LOC105888539,LOC105907285,LOC106607565 other upstream 1983153 29967550 ~ 30015180 (+)
LOC103035447 vegfa,vegf,LOC106584182 other downstream 200530 32199183 ~ 32218762 (+)
LOC103037843 pnrc2,LOC108441235 other downstream 437564 32436217 ~ 32441318 (+)
G85740 zdhhc14 other downstream 2748161 34746814 ~ 34800377 (+)
tfb1m tfb1m,cldn20,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299 other downstream 3289562 35288215 ~ 35339832 (+)
LOC111193254 NA other downstream 3638157 35636810 ~ 35658087 (+)

Expression


Co-expression Network