G85740 (zdhhc14)


Basic Information

Item Value
gene id G85740
gene name zdhhc14
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 34746814 ~ 34800377 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU115452
aaaaaagaaaaaaaaaaaacattatggcACAACACAATACCATATTCCTTTCGAAAATATGCAACTTAAAGCTTAACAGTTTGATATGCAACGTGGTGACAGATCATAACGCACGTAATCGACTGTCAACAATAGTCATCAAACAATATGAAACACTGTTCGTTCTGAGTTGCCAGGCAGGCTGcttgcttttctttcttttatttgtccgatttaccaaaaaaataaagaaaaagacgATAAAGGGAGCCCAGCAACTGAGTTATGAAGCAGCTTATCAAGAGGAACTGTAACACCACCTCTCTTTATATATGTTATGATACACTCCACTAGGTACAGCCCTTTGGTTTACCAGCCACCCAGCGTTCAGGGCAGTAGGTTGTGCATCCACAGGCAGTCTTTTAGCAGTCCTTTAGAGGAGTAAAAAGAGAGATTTCAGTAGAGTTTGGCAGATTTGTAGACCGGGTGGAGGAGAGTCCAGGCCATCACATTGAGGTGAAAGAAGaggtggtttaaaaaaaacaaacaaacaaaagaaagtgTTTAAAGGAAGGTGTTAAGGGACGGATGGCATTTGTGTTTTATGAGAGCTCACATGTCCGTTTTTAAACTGAGCTGAGTTTGACCAGGCCTCTGACTGAGTCCTCATGGAGAGAGTCCTGGCTGGCAGGGTTATAGAAAGGCATGGTGTGGCTGTGGCCCAGCGGACTGCCGCAGGGCAGCATGCCAGGTGGCGAAGGGGCTTCGTCTGGTGTGAGGAAGTGGTGGTGTCCCTCTGTTGCAGGATGGCTCTGGTGCGGCATTTCCGGTTCACAGCTCAGGTTTGGCGTGGAGGTGGGCGGCGTGGGCTGTCCCAAAGGTAGCAGAGTGCAGGGACCACCGATAGCCGTCCGTCCAGGAAGAGACGAGTCGTCCGCCATGACCACGGGCTGTTCGCTCTGCAGCAAGGGAGTGGCAGCAGCCTGCAAAATGAATTTGGTGCTCTGAATGCACTG

Function

symbol description
zdhhc14 Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation and protein targeting to membrane. Predicted to be located in Golgi membrane and endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC14 (zinc finger DHHC-type palmitoyltransferase 14).

NR:

description
PREDICTED: probable palmitoyltransferase ZDHHC14 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115452 True 995 TUCP 0.48 2 34746814 34800377

Neighbor

gene id symbol gene type direction distance location
kcnk5 kcnk5 coding upstream 11239 34705038 ~ 34735575 (+)
LOC103040842 LOC103040842,LOC108423400 coding upstream 86034 34648064 ~ 34660780 (+)
LOC103040539 LOC103040539,LOC108423401,LOC108270190 coding upstream 103591 34637839 ~ 34643223 (+)
kif6 kif6 coding upstream 112868 34493825 ~ 34633946 (+)
LOC111193251 NA coding upstream 445680 34298723 ~ 34301134 (+)
LOC103041454 NA coding downstream 464556 35264933 ~ 35269468 (+)
LOC103042380 LOC108437745 coding downstream 867323 35667700 ~ 35686642 (+)
LOC103042687 kif13b,LOC107751739,LOC107583481,LOC107755780 coding downstream 995773 35796150 ~ 35873071 (+)
efcab11 efcab11,LOC107755768,LOC107680765,LOC107588272,LOC107693110 coding downstream 1259473 36059850 ~ 36139729 (+)
foxn3 foxn3,LOC107751738,LOC107680774,LOC107583483,LOC107755777,LOC107693108 coding downstream 1270935 36071312 ~ 36379111 (+)
G85709 NA non-coding upstream 109614 34636506 ~ 34637200 (+)
G85710 NA non-coding upstream 170596 34575847 ~ 34576218 (+)
G85700 NA non-coding upstream 229371 34483579 ~ 34517443 (+)
LOC111193252 NA non-coding upstream 427398 34271932 ~ 34319416 (+)
G85591 NA non-coding upstream 793441 33854317 ~ 33953373 (+)
G85834 NA non-coding downstream 395539 35195916 ~ 35196276 (+)
G85835 NA non-coding downstream 411230 35211607 ~ 35218417 (+)
G85845 NA non-coding downstream 530857 35331234 ~ 35331537 (+)
G85842 NA non-coding downstream 541980 35342357 ~ 35349126 (+)
LOC111193253 NA non-coding downstream 550450 35350827 ~ 35364586 (+)
LOC103037843 pnrc2,LOC108441235 other upstream 2305496 32436217 ~ 32441318 (+)
LOC103035447 vegfa,vegf,LOC106584182 other upstream 2528052 32199183 ~ 32218762 (+)
G85189 NA other upstream 2922426 31823586 ~ 31824388 (+)
LOC103034273 LOC103034273,LOC108415529 other upstream 2941411 31749703 ~ 31805403 (+)
pnisr pnisr,LOC102782257 other upstream 3277258 31454984 ~ 31469556 (+)
tfb1m tfb1m,cldn20,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299 other downstream 487838 35288215 ~ 35339832 (+)
LOC111193254 NA other downstream 836433 35636810 ~ 35658087 (+)
LOC111193255 NA other downstream 2683644 37484021 ~ 37503882 (+)
bcl11b bcl11b,bcl11ba,LOC108270293,LOC107588284 other downstream 3029378 37829755 ~ 37933289 (+)
G86497 vrk1,LOC106602366 other downstream 3864790 38665167 ~ 38698313 (+)

Expression


Co-expression Network