Item | Value |
---|---|
gene id | LOC103037625 |
gene name | LOC103037625 |
gene type | coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035905.1 |
NCBI id | CM008308.1 |
chromosome length | 42966623 |
location | 30713604 ~ 30746863 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
id | description |
---|---|
K23740 | SH3BGR; SH3 domain-binding glutamic acid-rich protein |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_007231620.3 | True | 1506 | mRNA | 0.43 | 14 | 30713604 | 30746863 |
XM_007231621.3 | False | 1482 | mRNA | 0.43 | 13 | 30713604 | 30746863 |
XM_007231622.3 | False | 1482 | mRNA | 0.43 | 13 | 30713604 | 30746863 |
XM_007231623.3 | False | 1478 | mRNA | 0.43 | 13 | 30713605 | 30746863 |
XM_007231625.3 | False | 1453 | mRNA | 0.43 | 12 | 30713606 | 30746863 |
XM_007231626.3 | False | 1454 | mRNA | 0.43 | 12 | 30713605 | 30746863 |
XM_007231627.3 | False | 1429 | mRNA | 0.43 | 11 | 30713606 | 30746863 |
XM_007231628.3 | False | 1425 | mRNA | 0.43 | 11 | 30713607 | 30746863 |
XM_007231630.3 | False | 1423 | mRNA | 0.43 | 11 | 30713606 | 30746863 |
XM_007231631.3 | False | 1401 | mRNA | 0.43 | 10 | 30713607 | 30746863 |
XM_007231632.3 | False | 1398 | mRNA | 0.42 | 10 | 30713607 | 30746863 |
XM_007231633.3 | False | 1394 | mRNA | 0.42 | 10 | 30713608 | 30746863 |
XM_007231634.3 | False | 1395 | mRNA | 0.42 | 10 | 30713607 | 30746863 |
XM_007231635.3 | False | 1370 | mRNA | 0.42 | 9 | 30713608 | 30746863 |
XM_007231636.3 | False | 1370 | mRNA | 0.42 | 9 | 30713608 | 30746863 |
XM_007231637.3 | False | 1370 | mRNA | 0.42 | 9 | 30713608 | 30746863 |
XM_007231638.3 | False | 1347 | mRNA | 0.42 | 13 | 30713610 | 30746863 |
XM_007231639.3 | False | 1320 | mRNA | 0.42 | 12 | 30713610 | 30746863 |
XM_015600845.2 | False | 1341 | mRNA | 0.42 | 8 | 30713610 | 30746863 |
XM_015600846.2 | False | 1311 | mRNA | 0.42 | 7 | 30713610 | 30746863 |
XM_015600847.2 | False | 1296 | mRNA | 0.42 | 11 | 30713610 | 30746863 |
XM_015600848.2 | False | 1239 | mRNA | 0.42 | 9 | 30713610 | 30746863 |
XM_015600849.2 | False | 1215 | mRNA | 0.41 | 8 | 30713610 | 30746863 |
XM_015600850.2 | False | 1188 | mRNA | 0.41 | 7 | 30713610 | 30746863 |
XM_015600851.2 | False | 1158 | mRNA | 0.41 | 6 | 30713610 | 30746863 |
XM_022673150.1 | False | 1454 | mRNA | 0.43 | 12 | 30713605 | 30746863 |
XM_022673151.1 | False | 1429 | mRNA | 0.43 | 11 | 30713606 | 30746863 |
XM_022673152.1 | False | 1426 | mRNA | 0.43 | 11 | 30713606 | 30746863 |
XM_022673154.1 | False | 1401 | mRNA | 0.42 | 10 | 30713607 | 30746863 |
XM_022673155.1 | False | 1373 | mRNA | 0.42 | 9 | 30713608 | 30746863 |
XM_022673156.1 | False | 1266 | mRNA | 0.42 | 10 | 30713610 | 30746863 |
XM_022673157.1 | False | 1242 | mRNA | 0.42 | 9 | 30713610 | 30746863 |
XM_022673159.1 | False | 1128 | mRNA | 0.41 | 5 | 30713610 | 30746863 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC111193145 | NA | coding | upstream | 81972 | 30627847 ~ 30631632 (+) |
LOC103031349 | ece2 | coding | upstream | 149810 | 30425710 ~ 30563794 (+) |
yeats2 | yeats2,LOC107578903 | coding | upstream | 386452 | 30257792 ~ 30327152 (+) |
LOC103029649 | klhl24,LOC107659963,LOC107721788,LOC107663692,LOC107721905 | coding | upstream | 475079 | 30196717 ~ 30238525 (+) |
LOC103031974 | NA | coding | upstream | 523434 | 30189061 ~ 30190170 (+) |
rpp40 | NA | coding | downstream | 136445 | 30883308 ~ 30892684 (+) |
LOC103044961 | NA | coding | downstream | 176106 | 30922969 ~ 30938428 (+) |
znf407 | LOC104944474,LOC104948785 | coding | downstream | 195813 | 30942676 ~ 30991541 (+) |
tshz1 | NA | coding | downstream | 283148 | 31030011 ~ 31049206 (+) |
znf236 | znf236 | coding | downstream | 406746 | 31153609 ~ 31238682 (+) |
G84858 | NA | non-coding | upstream | 6421 | 30704476 ~ 30707183 (+) |
G84831 | NA | non-coding | upstream | 24443 | 30686920 ~ 30689161 (+) |
G84806 | NA | non-coding | upstream | 119196 | 30593633 ~ 30594408 (+) |
G84804 | NA | non-coding | upstream | 124581 | 30580056 ~ 30589023 (+) |
G84805 | NA | non-coding | upstream | 129798 | 30583155 ~ 30583806 (+) |
G84870 | pik3cb | non-coding | downstream | 23738 | 30770601 ~ 30771083 (+) |
G84877 | NA | non-coding | downstream | 58338 | 30805201 ~ 30805742 (+) |
G84906 | NA | non-coding | downstream | 151056 | 30897919 ~ 30899179 (+) |
G84881 | LOC103044643,LOC108428349,LOC107585172,LOC107688461,LOC107722553,LOC107680226,LOC107589802,LOC107718075 | non-coding | downstream | 166020 | 30912883 ~ 30922290 (+) |
G84997 | NA | non-coding | downstream | 303547 | 31050410 ~ 31050652 (+) |
alg3 | alg3,LOC107660011,LOC107730451,LOC107749127,LOC107557882,LOC107692886,LOC107600115 | other | upstream | 98542 | 30606757 ~ 30615062 (+) |
LOC103025336 | rhob,LOC103025336,LOC105888539,LOC105907285,LOC106607565 | other | upstream | 698424 | 29967550 ~ 30015180 (+) |
LOC107197844 | NA | other | upstream | 1634706 | 29071891 ~ 29078898 (+) |
LOC111193135 | NA | other | upstream | 1669865 | 29043217 ~ 29043739 (+) |
LOC111193240 | NA | other | upstream | 1671997 | 29040979 ~ 29041607 (+) |
pnisr | pnisr,LOC102782257 | other | downstream | 708121 | 31454984 ~ 31469556 (+) |
LOC103034273 | LOC103034273,LOC108415529 | other | downstream | 1002840 | 31749703 ~ 31805403 (+) |
G85189 | NA | other | downstream | 1076723 | 31823586 ~ 31824388 (+) |
LOC103035447 | vegfa,vegf,LOC106584182 | other | downstream | 1452320 | 32199183 ~ 32218762 (+) |
LOC103037843 | pnrc2,LOC108441235 | other | downstream | 1689354 | 32436217 ~ 32441318 (+) |