LOC103026492


Basic Information

Item Value
gene id LOC103026492
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 10282665 ~ 10292293 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007239249.2
TCAGAACAAACTTCAGGGATCACATTCAGAATGAGGGTTCTGCTCGTTGTTGCCGCTCTTGTGGTTGTGGCCGGTGCAGCCGGTGTCTCTCTGGAGGACATGGAGTTCCACAGCTGGAAAATTAAGTTTGggAGGAATTATGGTTCTGAAGAAGAGGAGTCTCAGCGTAAAATGACCTGGTTGGCCAATCGTAAGCTGGTTCTGGAACACAACATGCTGGCTGACCAGGGCCTTAAAAGCTACAGACTGGGCATGAACCACTTTGCGGACATGgACAATCAAGAGTATCAGGACAAGTTCGCAAACTGCCTGAAACCCTTCAACCGGAATAAGACCAACCCTGCTCCTGCATTTCACAGACCAGCAGTTGGCGCTGCTGTGCCTGAGGAAGTGGACTGGAGGGATCTGGGCTATGTGACAGAGATTAAGAACCAGGAGCAATGTGGCTCCTGTTGGGCCTTCAGTTCAGTGGGGGCGCTGGAGGGTCAGATGTTCCGGAAGACTGGGAAGCTGGTACCCCTCAGTGAGCAGCAGCTGGTGGACTGCTCCTTCCTTTATGGAAACCTTGGATGTGAGGGGGGTTTAATGGAGGAGGCTTTTGAGTACATCATGCACAATGGAGGTCTGGAGGCAGAAAGTACCTACCCTTATGAGGCTGAGGAAAAGATGTGCAGGTTTAAGCAGCATGAAGCCGTTGCCTATTGCAGCAGTTACGCGCATCTGCCCGTAGGAGACGAGATGGCTTTGATGTCCGCCGTGTCCGTGATCGGACCTGTTGCTGTAGCCATAGATGCCGGCCGTCACACCTTCCAGCTCTACGCCTCTGGTGTGTATGATGATCCGTACTGCAGCAAGCGTTTGTCAAATCATGCAGTCCTGGTTGTTGGTTATGGCTTTGACATGGAACAAGGGGATTACTGGCTGGTCAAGAACAGCTGGAGTACTGTCTGGGGTGATAAGGGCTACATCAAGATGTCCCGGAACAAGAGGAACCAGTGCGGTATTGCCTCATACGCCGTCTACCCTGTGGTTTAGAGATCGAGGCTCAGTGAAGGGTGTCTCCAGTCTGAGCACCAGCTGAAGGACTCCACCACCAGTGTGTGGCAGAACTACAGCGGCTCTGTGAACACAGCATCTACAGCTGCTGctgaattttctttttattatgtgTATTTCTTATCCTTTAACTTTTCTCTTTTCAGAACTTCACGTTCACTCTGTAAAGCAACATATAAAaccagattaaaaaataaacgaTAAGCATTCCCTAAA

Function

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007239249.2 True 1272 mRNA 0.50 9 10282665 10292293

Neighbor

gene id symbol gene type direction distance location
LOC103026171 LOC108413038 coding upstream 30170 10242588 ~ 10252495 (+)
greb1 greb1,LOC107719472,LOC107697724,LOC107590942 coding upstream 463220 9766166 ~ 9819445 (+)
trmt61b NA coding upstream 1648472 8623401 ~ 8634193 (+)
hmgcl hmgcl,LOC107583590,LOC107721118,LOC107670875,LOC107715992 coding upstream 1715877 8552448 ~ 8566788 (+)
LOC103031442 LOC103359616 coding upstream 1775504 8469601 ~ 8507161 (+)
LOC103026974 NA coding downstream 36675 10328968 ~ 10336716 (+)
LOC103027561 NA coding downstream 60121 10352414 ~ 10362045 (+)
LOC111193128 NA coding downstream 372165 10664458 ~ 10666674 (+)
LOC103024809 LOC107689792,LOC105902344 coding downstream 435555 10727848 ~ 10764714 (+)
LOC103032219 slc18a2,LOC107670861,LOC107744594,LOC107715963,LOC107689804 coding downstream 1284946 11577239 ~ 11637984 (+)
G79179 NA non-coding upstream 90450 10189740 ~ 10192215 (+)
G79193 NA non-coding upstream 117021 10160728 ~ 10165644 (+)
G79183 NA non-coding upstream 151348 10131019 ~ 10131317 (+)
G79174 NA non-coding upstream 169344 10107630 ~ 10113321 (+)
G79165 LOC103027354 non-coding upstream 223919 10056467 ~ 10058746 (+)
G79341 NA non-coding downstream 53223 10345516 ~ 10348155 (+)
G79345 NA non-coding downstream 96111 10388404 ~ 10391520 (+)
G79334 NA non-coding downstream 109201 10401494 ~ 10423882 (+)
G79379 LOC108430231,LOC107583545 non-coding downstream 160117 10452410 ~ 10468725 (+)
G79381 NA non-coding downstream 185370 10477663 ~ 10558011 (+)
LOC103029457 LOC108441045 other upstream 327627 9883006 ~ 9955038 (+)
spata17 NA other upstream 727940 9495449 ~ 9554725 (+)
G78817 gale,LOC107583591,LOC107721820,LOC107583106 other upstream 1732697 8529854 ~ 8549968 (+)
G78818 NA other upstream 1744983 8535916 ~ 8537682 (+)
fam167b LOC108433301,LOC101067225 other upstream 2553664 7656307 ~ 7729001 (+)
LOC103025860 pcgf5b,LOC103025860,LOC108430201,LOC107583544,LOC107553461,LOC107715951,LOC107670868 other downstream 245786 10538079 ~ 10556868 (+)
fam98a fam98a,LOC107583540,LOC107744493,LOC107670808 other downstream 509064 10801357 ~ 10814914 (+)
G79654 NA other downstream 1262389 11554682 ~ 11555139 (+)
G79717 NA other downstream 1608802 11901095 ~ 11905385 (+)
G79761 LOC108438749 other downstream 1772551 12064844 ~ 12076211 (+)

Expression


Co-expression Network