LOC103026974


Basic Information

Item Value
gene id LOC103026974
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 10328968 ~ 10336716 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007239250.3
TTAAGAAATAAACAGGGCGGAGCTTCATTCTATATTAACCTGCACACTTTGTGATAGTTACACAGGCAGGTCTTCAGGACTCCAGGAGATCAGTCAGAATGAGGGTGCTACTCGCTGTCGCCGCTCTTGTGGTCGTGGTTGGTGCAGCCAGTGTCTCAGAGGAGGACCAGGAGTTTGAATCCTGGAAACAGGAGCATGGTAAGAGTTACAGTTCTGAGGAAGAGGAGTCTCAGCGTAAGATGAGCTGGCTGACCAGTCGTAAGCTGGTTCTGGAGCACAACAAGCTGGCTGACCAGGGCCTTGAGAGCTACACACTCGAAATGAACGAGTTTGCAGACATGGAAGACCAGGAGTTCCAGGACATGTACACCGGCAGCCTGGATTCTATGAACGACACCGAGACCGACACCCTCTGTACCGCTACATTTACGCCAGAGAATGAAGAGGATACTCTGCCCTGCAGAGTGGACTGGAGGCAGGCGGGATACGTGACGGGCGTTAAGAACCAGAGGTCCTGTGGCTCCTGCTGGGCCTTCAGTGCGACGGGGGCCCTCGAGGGTCAAATGTACCGGAAGACAAGGCAGCTGATACCCCTGAGTGAGCAACAGCTGATCGACTGCTCCGGGAGATATGGAAACCATGGCTGTAAGGGTGGTTTGGCAATCCGGGCCTTTAGGTACGCCATGCACAGAGGTCTGGAGGCAGGATACAACTATCCCTATAGGGCCAGGAGGTCCAGAAGATGCCACTTTAATCCATGGAAGGTTAGGGCTACCTGCCGCGGCATAGTGTGCTTGCCCAGAGGAAATGAGAAAATACTGAAGTTTGCTGTGGCCAAAATCGGACCGATTTCAGTATCTGTAGACTCCTCCAGACGCTCCTTCAGGCTCTACAAGTCAGGTGTGTATAACGATCGCCGCTGCAGTAACCATCGCATGAACCACGCCGTCCTGCTGATTGGTTATGGCAGAGCAGGAGGAAGCAGGCGTTATTGGCTGGTGAAGAACAGCTGGGGAACTAGGTGGGGTGAAAACGGCTACATTAGGATGTCCAGGAACCAGAGGAACCAGTGCGGCATTGCCACAAGACCCGTCTTCCCTATTGTTTAAAGATTAAAGAAAAAGCCGAAGCAGTGATGAACATCTCTGGAAAGAGGCTTCAGTCTTACCACAATGATCATATCCcatgcagcagaagcagcaaaaaaaatatgctattttatactatatcttttttctttaatgtcCTGCTTTTACGTAATTCTTTCTCTATGATCAGCTGTTGAGAGaaagcagcagtattagctAGACCACCAGAGACCACCATCCTctctcttttaaaataaatgtaaaagtgttGTATCCAAACTTTAACTATAATAAACTTTCAGCATAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007239250.3 True 1397 mRNA 0.49 9 10328968 10336716

Neighbor

gene id symbol gene type direction distance location
LOC103026492 NA coding upstream 36675 10282665 ~ 10292293 (+)
LOC103026171 LOC108413038 coding upstream 76473 10242588 ~ 10252495 (+)
greb1 greb1,LOC107719472,LOC107697724,LOC107590942 coding upstream 509523 9766166 ~ 9819445 (+)
trmt61b NA coding upstream 1694775 8623401 ~ 8634193 (+)
hmgcl hmgcl,LOC107583590,LOC107721118,LOC107670875,LOC107715992 coding upstream 1762180 8552448 ~ 8566788 (+)
LOC103027561 NA coding downstream 15698 10352414 ~ 10362045 (+)
LOC111193128 NA coding downstream 327742 10664458 ~ 10666674 (+)
LOC103024809 LOC107689792,LOC105902344 coding downstream 391132 10727848 ~ 10764714 (+)
LOC103032219 slc18a2,LOC107670861,LOC107744594,LOC107715963,LOC107689804 coding downstream 1240523 11577239 ~ 11637984 (+)
pex13 pex13 coding downstream 1473517 11810233 ~ 11823175 (+)
G79179 NA non-coding upstream 136753 10189740 ~ 10192215 (+)
G79193 NA non-coding upstream 163324 10160728 ~ 10165644 (+)
G79183 NA non-coding upstream 197651 10131019 ~ 10131317 (+)
G79174 NA non-coding upstream 215647 10107630 ~ 10113321 (+)
G79165 LOC103027354 non-coding upstream 270222 10056467 ~ 10058746 (+)
G79341 NA non-coding downstream 8800 10345516 ~ 10348155 (+)
G79345 NA non-coding downstream 51688 10388404 ~ 10391520 (+)
G79334 NA non-coding downstream 64778 10401494 ~ 10423882 (+)
G79379 LOC108430231,LOC107583545 non-coding downstream 115694 10452410 ~ 10468725 (+)
G79381 NA non-coding downstream 140947 10477663 ~ 10558011 (+)
LOC103029457 LOC108441045 other upstream 373930 9883006 ~ 9955038 (+)
spata17 NA other upstream 774243 9495449 ~ 9554725 (+)
G78817 gale,LOC107583591,LOC107721820,LOC107583106 other upstream 1779000 8529854 ~ 8549968 (+)
G78818 NA other upstream 1791286 8535916 ~ 8537682 (+)
fam167b LOC108433301,LOC101067225 other upstream 2599967 7656307 ~ 7729001 (+)
LOC103025860 pcgf5b,LOC103025860,LOC108430201,LOC107583544,LOC107553461,LOC107715951,LOC107670868 other downstream 201363 10538079 ~ 10556868 (+)
fam98a fam98a,LOC107583540,LOC107744493,LOC107670808 other downstream 464641 10801357 ~ 10814914 (+)
G79654 NA other downstream 1217966 11554682 ~ 11555139 (+)
G79717 NA other downstream 1564379 11901095 ~ 11905385 (+)
G79761 LOC108438749 other downstream 1728128 12064844 ~ 12076211 (+)

Expression


Co-expression Network