LOC103031040 (fam150b,LOC108425626)


Basic Information

Item Value
gene id LOC103031040
gene name fam150b,LOC108425626
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 16760823 ~ 16767006 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007239265.3
GGTAAAGTTGAGCTTGAGTAAACGAAAGCAGTGTTGGAGCAGGGCCTGCCTGTTCTACTGCTACAGCTGCTGCTACACTTGCTCTGGAGAAGCTGTATAATAGCTATATAGTGTTCGTGctgcagttctctctctctctacacagaGCTATGCGGCTGGCTACTTAACCCTAATCGCGTCTAATCATATATCTGCACGCCGGGCTTTCCAGCATTCGCGCCGAAATGAGAGGGACGCTGTGAAAGACGTAAAGGCTGTAGGCTACTCAACAGAAGCTCCAGCTGAGGTAAACGACTGGACGTGAAGGAGCGCAGCTTCTGGCTGTTTTTGGAGGGACCCAGAGAAGGAGAGCAGAATTGCCCAGAGTGAAGAAAAGTGTGGGAAAAGTCGtaagaggaggaaaagaaagactTTACCTGGAGCTCGTGTAGAGACAGAAACGGAGGAGTCATTTTAGTTTGCGTTATGAGACGCTGAACTTGAAGATAGAGGGGTGGAGGCTgtggttgtggtggtggtgggcagATGGGGGTGCTAAAACCAAATCAAAACCACTGAAAATGCGCTTCTCCAGGAACCCCAGCCACATGGACATGTTATTATCCACATGGGACAAGTCCTTACGTCTGCGGCGGGGgatcataataataaacaccattGAGAGAGGACCCATGCCGGAGGAGTAGTGGGAGTAATGGTAGCTAGAGCTAAAACTTCATCAAGAAGAAGAGaggataaaagagagaaaaagtgagagtgtgagtaagtgagaaagaagagagagaaagaggagggagAGATAGGAAgcgtgtgctctctctctttctcatgatTATTTTCCACCCACTacccaccaccactaccacacTCCACCACCACACTCAACTCAACGACGGATGACCCACGAGAGCCGGGTTTAAACATATAAAGGACAGACTGCTGCCTGCCAGCGCCGacagaggaagaggaggtggtggtggaaCGTCTGTAGCCTTTCTATAACCTACCTAGCTAACTTTACATAGCTAACTTAGGCTATCTACCTACCTGGAGAAGTGCGGCTTCCATGTCCCAGTCCCAGTCTgcgctactgctactactgttactactgctgctgcttctgcttctaCTTTAAAGGTGATATTAAAAAGTGTGGGGATCACTGAAGGCACCCAAGGAACGGCCACTATCTCCCACACAAGAGCCGAGACACGGGAGCTGCTGCCTCCAAAATCAGGACTAGAGGGCAGTCAGGGCGGTCTCGCCTTCGCCCACCTTTCATTATGAGGGTGCTGCGCTCCCCGGTCTGCGTCGGGCTCTTGTTGGTCATTCTGGCGGCTGGCTCTTGCCGGGAGGGCAGCAGGGAGGGCAGCAgtctgctggagctgctgatgGACTCAAGCAGAGCAGCACGGCAGCAGCAGGCGGACCACAGCTCGACCAGCGTCCAGCAACAGCAACAGCCGCAGgagcagcagcaacaggagCCCCCCAAAAGAAATTATTCAGTAGAGACGACGGAGGGGAACGAAGTGAACAAGTCCTACCAGCACGACCAAGTACTGGAAGTCTTTCCGAGAGATCTGCGGCAAAAGGAAAAGTTCTTGAAACATTTAACAGGGCCTCTCTATTTTAGCCCCAAATGCAGCAAACACTTTTATAGACTATATCATAATACCAGGGACTGCACGATACCAGCCTATTATAAAAGATGTGCTCGGCTACTCACAAGGTTAGCAGGCAGTCAGCGGTGCTCAGAGGGATAGACCTTACAGAGTTCAACAGATCTAGAGAAGTAAAGAGAACTGAGAAGAAAAAGTGCCTTGGAGAAGAACAGGGAAATCTGATGAACTCAGAAAATttgtcatttagtttttttttttttttaacgaaaTGGAACTCCTCCATCGATTTCTACATACAGTAGACATTTCTACATACAGGACTGATGGAATCCATGTTATCACTGAACTTTCTGATGACTCTAATGGTGCAAGTGAAGATGTTTTACAGAGAAGCAAATGAACAAAGGACCCGCTGCCAAAAGACTGCTGCTGACTGCTGCTGCAAATGCTCGTCGGTTGATTGATTTGCCTTCAcgagttgtgttgtgt
>XM_007239267.3
GGAGTGGTAAAGTTGAGCTTGAGTAAACGAAAGCAGTGTTGGAGCAGGGCCTGCCTGTTCTACTGCTACAGCTGCTGCTACACTTGCTCTGGAGAAGCTGTATAATAGCTATATAGTGTTCGTGctgcagttctctctctctctacacagaGCTATGCGGCTGGCTACTTAACCCTAATCGCGTCTAATCATATATCTGCACGCCGGGCTTTCCAGCATTCGCGCCGAAATGAGAGGGACGCTGTGAAAGACGTAAAGGCTGTAGGCTACTCAACAGAAGCTCCAGCTGAGGTAAACGACTGGACGTGAAGGAGCGCAGCTTCTGGCTGTTTTTGGAGGGACCCAGAGAAGGAGAGCAGAATTGCCCAGAGTGAAGAAAAGTGTGGGAAAAGTCGtaagaggaggaaaagaaagactTTACCTGGAGCTCGTGTAGAGACAGAAACGGAGGAGTCATTTTAGTTTGCGTTATGAGACGCTGAACTTGAAGATAGAGGGGTGGAGGCTgtggttgtggtggtggtgggcagATGGGGGTGCTAAAACCAAATCAAAACCACTGAAAATGCGCTTCTCCAGGAACCCCAGCCACATGGACATGTTATTATCCACATGGGACAAGTCCTTACGTCTGCGGCGGGGgatcataataataaacaccattGAGAGAGGACCCATGCCGGAGGAGTAGTGGGAGTAATGGTAGCTAGAGCTAAAACTTCATCAAGAAGAAGAGaggataaaagagagaaaaagtgagagtgtgagtaagtgagaaagaagagagagaaagaggagggagAGATAGGAAgcgtgtgctctctctctttctcatgatTATTTTCCACCCACTacccaccaccactaccacacTCCACCACCACACTCAACTCAACGACGGATGACCCACGAGAGCCGGGTTTAAACATATAAAGGACAGACTGCTGCCTGCCAGCGCCGacagaggaagaggaggtggtggtggaaCGTCTGTAGCCTTTCTATAACCTACCTAGCTAACTTTACATAGCTAACTTAGGCTATCTACCTACCTGGAGAAGTGCGGCTTCCATGTCCCAGTCCCAGTCTgcgctactgctactactgttactactgctgctgcttctgcttctaCTTTAAAGGTGATATTAAAAAGTGTGGGGATCACTGAAGGCACCCAAGGAACGGCCACTATCTCCCACACAAGAGCCGAGACACGGGAGCTGCTGCCTCCAAAATCAGGACTAGAGGGCAGTCAGGGCGGTCTCGCCTTCGCCCACCTTTCATTATGAGGGTGCTGCGCTCCCCGGTCTGCGTCGGGCTCTTGTTGGTCATTCTGGCGGCTGGCTCTTGCCGGGAGGGCAGCAGGGAGGGCAGCAgtctgctggagctgctgatgGACTCAAGCAGAGCAGCACGGCAGCAGCAGGCGGACCACAGCTCGACCAGCGTCCAGCAACAGCAACAGCCGCAGgagcagcagcaacaggagCCCCCCAAAAGAAATTATTCAGTAGAGACGACGGAGGGGAACGAAGTGAACAAGTCCTACCAGCACGACCAAGTACTGGTCTTTCCGAGAGATCTGCGGCAAAAGGAAAAGTTCTTGAAACATTTAACAGGGCCTCTCTATTTTAGCCCCAAATGCAGCAAACACTTTTATAGACTATATCATAATACCAGGGACTGCACGATACCAGCCTATTATAAAAGATGTGCTCGGCTACTCACAAGGTTAGCAGGCAGTCAGCGGTGCTCAGAGGGATAGACCTTACAGAGTTCAACAGATCTAGAGAAGTAAAGAGAACTGAGAAGAAAAAGTGCCTTGGAGAAGAACAGGGAAATCTGATGAACTCAGAAAATttgtcatttagtttttttttttttttaacgaaaTGGAACTCCTCCATCGATTTCTACATACAGTAGACATTTCTACATACAGGACTGATGGAATCCATGTTATCACTGAACTTTCTGATGACTCTAATGGTGCAAGTGAAGATGTTTTACAGAGAAGCAAATGAACAAAGGACCCGCTGCCAAAAGACTGCTGCTGACTGCTGCTGCAAATGCTCGTCGGTTGATTGATTTGCCTTCAcgagttgtgttgtgt
>XM_015603055.2
AGTGGTAAAGTTGAGCTTGAGTAAACGAAAGCAGTGTTGGAGCAGGGCCTGCCTGTTCTACTGCTACAGCTGCTGCTACACTTGCTCTGGAGAAGCTGTATAATAGCTATATAGTGTTCGTGctgcagttctctctctctctacacagaGCTATGCGGCTGGCTACTTAACCCTAATCGCGTCTAATCATATATCTGCACGCCGGGCTTTCCAGCATTCGCGCCGAAATGAGAGGGACGCTGTGAAAGACGTAAAGGCTGTAGGCTACTCAACAGAAGCTCCAGCTGAGGTAAACGACTGGACGTGAAGGAGCGCAGCTTCTGGCTGTTTTTGGAGGGACCCAGAGAAGGAGAGCAGAATTGCCCAGAGTGAAGAAAAGTGTGGGAAAAGTCGtaagaggaggaaaagaaagactTTACCTGGAGCTCGTGTAGAGACAGAAACGGAGGAGTCATTTTAGTTTGCGTTATGAGACGCTGAACTTGAAGATAGAGGGGTGGAGGCTgtggttgtggtggtggtgggcagATGGGGGTGCTAAAACCAAATCAAAACCACTGAAAATGCGCTTCTCCAGGAACCCCAGCCACATGGACATGTTATTATCCACATGGGACAAGTCCTTACGTCTGCGGCGGGGgatcataataataaacaccattGAGAGAGGACCCATGCCGGAGGAGTAGTGGGAGTAATGGTAGCTAGAGCTAAAACTTCATCAAGAAGAAGAGaggataaaagagagaaaaagtgagagtgtgagtaagtgagaaagaagagagagaaagaggagggagAGATAGGAAgcgtgtgctctctctctttctcatgatTATTTTCCACCCACTacccaccaccactaccacacTCCACCACCACACTCAACTCAACGACGGATGACCCACGAGAGCCGGGTTTAAACATATAAAGGACAGACTGCTGCCTGCCAGCGCCGacagaggaagaggaggtggtggtggaaCGTCTGTAGCCTTTCTATAACCTACCTAGCTAACTTTACATAGCTAACTTAGGCTATCTACCTACCTGGAGAAGTGCGGCTTCCATGTCCCAGTCCCAGTCTgcgctactgctactactgttactactgctgctgcttctgcttctaCTTTAAAGGTGATATTAAAAAGTGTGGGGATCACTGAAGGCACCCAAGGAACGGCCACTATCTCCCACACAAGAGCCGAGACACGGGAGCTGCTGCCTCCAAAATCAGGACTAGAGGGCAGTCAGGGCGGTCTCGCCTTCGCCCACCTTTCATTATGAGGGTGCTGCGCTCCCCGGTCTGCGTCGGGCTCTTGTTGGTCATTCTGGCGGCTGGCTCTTGCCGGGAGGGCAGCAGGGAGGGCAGCAgtctgctggagctgctgatgGACTCAAGCAGAGCAGCACGGCAGCAGCAGGCGGACCACAGCTCGACCAGCGTCCAGCAACAGCAACAGCCGCAGgagcagcagcaacaggagCCCCCCAAAAGAAATTATTCAGTAGAGACGACGGAGGGGAACGAAGTGAACAAGTCCTACCAGCACGACCAAGTACTGGAAGTCTTTCCGAGAGATCTGCGGCAAAAGGAAAAGTTCTTGAAACATTTAACAGATTATAAAAGATGTGCTCGGCTACTCACAAGGTTAGCAGGCAGTCAGCGGTGCTCAGAGGGATAGACCTTACAGAGTTCAACAGATCTAGAGAAGTAAAGAGAACTGAGAAGAAAAAGTGCCTTGGAGAAGAACAGGGAAATCTGATGAACTCAGAAAATttgtcatttagtttttttttttttttaacgaaaTGGAACTCCTCCATCGATTTCTACATACAGTAGACATTTCTACATACAGGACTGATGGAATCCATGTTATCACTGAACTTTCTGATGACTCTAATGGTGCAAGTGAAGATGTTTTACAGAGAAGCAAATGAACAAAGGACCCGCTGCCAAAAGACTGCTGCTGACTGCTGCTGCAAATGCTCGTCGGTTGATTGATTTGCCTTCAcgagttgtgttgtgt
>XM_022672828.1
AGGGAGTGGTAAAGTTGAGCTTGAGTAAACGAAAGCAGTGTTGGAGCAGGGCCTGCCTGTTCTACTGCTACAGCTGCTGCTACACTTGCTCTGGAGAAGCTGTATAATAGCTATATAGTGTTCGTGctgcagttctctctctctctacacagaGCTATGCGGCTGGCTACTTAACCCTAATCGCGTCTAATCATATATCTGCACGCCGGGCTTTCCAGCATTCGCGCCGAAATGAGAGGGACGCTGTGAAAGACGTAAAGGCTGTAGGCTACTCAACAGAAGCTCCAGCTGAGGTAAACGACTGGACGTGAAGGAGCGCAGCTTCTGGCTGTTTTTGGAGGGACCCAGAGAAGGAGAGCAGAATTGCCCAGAGTGAAGAAAAGTGTGGGAAAAGTCGtaagaggaggaaaagaaagactTTACCTGGAGCTCGTGTAGAGACAGAAACGGAGGAGTCATTTTAGTTTGCGTTATGAGACGCTGAACTTGAAGATAGAGGGGTGGAGGCTgtggttgtggtggtggtgggcagATGGGGGTGCTAAAACCAAATCAAAACCACTGAAAATGCGCTTCTCCAGGAACCCCAGCCACATGGACATGTTATTATCCACATGGGACAAGTCCTTACGTCTGCGGCGGGGgatcataataataaacaccattGAGAGAGGACCCATGCCGGAGGAGTAGTGGGAGTAATGGTAGCTAGAGCTAAAACTTCATCAAGAAGAAGAGaggataaaagagagaaaaagtgagagtgtgagtaagtgagaaagaagagagagaaagaggagggagAGATAGGAAgcgtgtgctctctctctttctcatgatTATTTTCCACCCACTacccaccaccactaccacacTCCACCACCACACTCAACTCAACGACGGATGACCCACGAGAGCCGGGTTTAAACATATAAAGGACAGACTGCTGCCTGCCAGCGCCGacagaggaagaggaggtggtggtggaaCGTCTGTAGCCTTTCTATAACCTACCTAGCTAACTTTACATAGCTAACTTAGGCTATCTACCTACCTGGAGAAGTGCGGCTTCCATGTCCCAGTCCCAGTCTgcgctactgctactactgttactactgctgctgcttctgcttctaCTTTAAAGGTGATATTAAAAAGTGTGGGGATCACTGAAGGCACCCAAGGAACGGCCACTATCTCCCACACAAGAGCCGAGACACGGGAGCTGCTGCCTCCAAAATCAGGACTAGAGGGCAGTCAGGGCGGTCTCGCCTTCGCCCACCTTTCATTATGAGGGTGCTGCGCTCCCCGGTCTGCGTCGGGCTCTTGTTGGTCATTCTGGCGGCTGGCTCTTGCCGGGAGGGCAGCAGGGAGGGCAGCAgtctgctggagctgctgatgGACTCAAGCAGAGCAGCACGGCAGCAGCAGGCGGACCACAGCTCGACCAGCGTCCAGCAACAGCAACAGCCGCAGgagcagcagcaacaggagCCCCCCAAAAGAAATTATTCAGTAGAGACGACGGAGGGGAACGAAGTGAACAAGTCCTACCAGCACGACCAAGTACTGGTCTTTCCGAGAGATCTGCGGCAAAAGGAAAAGTTCTTGAAACATTTAACAGATTATAAAAGATGTGCTCGGCTACTCACAAGGTTAGCAGGCAGTCAGCGGTGCTCAGAGGGATAGACCTTACAGAGTTCAACAGATCTAGAGAAGTAAAGAGAACTGAGAAGAAAAAGTGCCTTGGAGAAGAACAGGGAAATCTGATGAACTCAGAAAATttgtcatttagtttttttttttttttaacgaaaTGGAACTCCTCCATCGATTTCTACATACAGTAGACATTTCTACATACAGGACTGATGGAATCCATGTTATCACTGAACTTTCTGATGACTCTAATGGTGCAAGTGAAGATGTTTTACAGAGAAGCAAATGAACAAAGGACCCGCTGCCAAAAGACTGCTGCTGACTGCTGCTGCAAATGCTCGTCGGTTGATTGATTTGCCTTCAcgagttgtgttgtgt

Function

NR:

description
PREDICTED: protein FAM150B-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007239265.3 False 2114 mRNA 0.49 6 16760830 16767006
XM_007239267.3 True 2116 mRNA 0.49 6 16760825 16767006
XM_015603055.2 False 2036 mRNA 0.49 5 16760827 16767006
XM_022672828.1 False 2037 mRNA 0.49 5 16760823 16767006

Neighbor

gene id symbol gene type direction distance location
LOC103022442 LOC108433935,LOC100537549,LOC107592775,LOC107752809,LOC105908160 coding upstream 31757 16721225 ~ 16729066 (+)
LOC103021824 efr3b,LOC107697777,LOC107752767,LOC107592778 coding upstream 47782 16687918 ~ 16713041 (+)
ect2l NA coding upstream 152366 16594547 ~ 16608457 (+)
ccdc28a ccdc28a coding upstream 167250 16586187 ~ 16593573 (+)
tmem121 tmem121a,tmem121,LOC107594772,LOC107674105,LOC107592808,LOC107697696 coding upstream 221363 16518216 ~ 16539460 (+)
sh3yl1 sh3yl1,LOC107733179,LOC107594817,LOC107674108 coding downstream 15531 16782537 ~ 16838704 (+)
LOC103043735 id2,id2a,LOC107579075,LOC107707685,LOC106566577,LOC107655320 coding downstream 749966 17516972 ~ 17519541 (+)
asap2 asap2,LOC107707693 coding downstream 987547 17754553 ~ 17876082 (+)
iah1 iah1 coding downstream 1130951 17897957 ~ 17902838 (+)
eprs eprs,LOC107662594,LOC107679779 coding downstream 1517571 18284577 ~ 18306094 (+)
G81197 NA non-coding upstream 30649 16729820 ~ 16730174 (+)
G81190 NA non-coding upstream 41388 16716995 ~ 16719435 (+)
G81124 NA non-coding upstream 78891 16678648 ~ 16681932 (+)
G81106 NA non-coding upstream 139401 16619583 ~ 16621422 (+)
G81105 NA non-coding upstream 142699 16617687 ~ 16618124 (+)
G81220 NA non-coding downstream 73218 16840224 ~ 16845728 (+)
G81224 NA non-coding downstream 97105 16864111 ~ 16864542 (+)
G81243 NA non-coding downstream 212411 16979417 ~ 16982929 (+)
G81282 NA non-coding downstream 264057 17031063 ~ 17031359 (+)
G81288 NA non-coding downstream 326778 17093784 ~ 17093985 (+)
G80857 NA other upstream 1177492 15563987 ~ 15583331 (+)
LOC111193203 NA other upstream 1557036 15174535 ~ 15203787 (+)
LOC111188193 LOC108431664 other upstream 1925744 14806315 ~ 14835079 (+)
LOC111193140 NA other upstream 1957791 14788602 ~ 14803032 (+)
LOC103029370 pygb,LOC107553065,LOC107663289,LOC107671137,LOC107717055,LOC107583638 other upstream 1962219 14730508 ~ 14798604 (+)
cmpk2 cmpk2 other downstream 1260301 18027307 ~ 18037074 (+)
LOC103035760 rtkn2,rtkn2a other downstream 1693117 18460123 ~ 18469635 (+)
LOC103033848 LOC108435752 other downstream 1744616 18511622 ~ 18520947 (+)
G81704 NA other downstream 2163232 18930238 ~ 18930754 (+)
G81761 NA other downstream 2898730 19665736 ~ 19666047 (+)

Expression


Co-expression Network