LOC103025466 (LOC103025466,LOC107715944,LOC107654832,LOC107577051,LOC107736670,LOC101076253)


Basic Information

Item Value
gene id LOC103025466
gene name LOC103025466,LOC107715944,LOC107654832,LOC107577051,LOC107736670,LOC101076253
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 14107619 ~ 14110827 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007244600.3
gctgcgaatatcaaaccaacttcagcctcgtctcCCCCCTCTGGTGTGCTGTAATGGTTCAtccctgtttgtgtttgtttttgcaggcaggggcatgtgtgtgtgagagagtgtgagtgtgagggagtCTGCACTTACAATGTCAAGGTTTTTGAATCCGAACCTGAGAAGCTTCTTCTCCACCCAGATCAGGATGTCTTCAGATCAGCTGGGAGAGCTTGGGAAAGGAGCAGGGAagggaggaggaggcggaggctCTGTGAGGGAGGCAGGAGGAGCATTTGGGAAGAGGCAGGCAGCTGAGGAGGAGATGTACTTTAAgaGGAAAGAGCAGGAACAGTTGGCCTCTCTGAGACAGCACCATAAGGAAGAGATTGACCATCATAAGAAGGAGATTGAGCGTATACAGCAGGAGATTAGCCGCCATGAGGGCAAGATTCGCAAACTTGAAAAAAATGACTAGCTTTCTGGCAACAAATGCTCACCACAATCTCCTTCAGCTTTGATGTTAACATTTTTGCCGTTTGTTTGTAGGCTTGATTTGTtgattgtatttgtttaaagttcaATAAAAGAAGGGATATTAAGACGCTGA

Function

NR:

description
ATPase inhibitor B, mitochondrial-like

GO:

id name namespace
GO:0043086 negative regulation of catalytic activity biological_process
GO:0045980 negative regulation of nucleotide metabolic process biological_process
GO:0005739 mitochondrion cellular_component
GO:0004857 enzyme inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007244600.3 True 595 mRNA 0.47 3 14107619 14110827

Neighbor

gene id symbol gene type direction distance location
zmpste24 zmpste24,LOC107654896,LOC107583569,LOC107715979,LOC107670834,LOC107583239 coding upstream 5193 14090456 ~ 14102426 (+)
LOC103026792 LOC108431631,LOC108270417,LOC107668606,LOC107750856,LOC107717089,LOC107579247 coding upstream 388001 13484566 ~ 13719618 (+)
LOC103027186 LOC108433299 coding upstream 709975 13274588 ~ 13397644 (+)
LOC103024106 actn2b,LOC103024106,LOC108433346,LOC108270464,LOC107552853,LOC107668621,LOC107084685 coding upstream 838787 13237205 ~ 13268832 (+)
LOC103026899 p4ha1b,LOC108433345,LOC107671120,LOC108270445,LOC107668593,LOC107553883,LOC107750858 coding upstream 873916 13207448 ~ 13233703 (+)
rpl13a rpl13a,LOC106610677,LOC107654893 coding downstream 3239 14114066 ~ 14117650 (+)
htr1d htr1d,LOC108269542,LOC107719539,LOC107590957,LOC107583484 coding downstream 178421 14289248 ~ 14361236 (+)
LOC103027082 ccdc6a,ccdc6,LOC108431652,LOC105910584,LOC107717103,LOC107663299,LOC107671115 coding downstream 340294 14451121 ~ 14478899 (+)
LOC103027375 LOC108431653 coding downstream 384431 14495258 ~ 14511030 (+)
entpd6 entpd6 coding downstream 584766 14695593 ~ 14722677 (+)
G80500 NA non-coding upstream 44023 14057421 ~ 14063596 (+)
G80494 NA non-coding upstream 60674 14045379 ~ 14046945 (+)
G80388 NA non-coding upstream 370519 13687025 ~ 13737100 (+)
G80386 NA non-coding upstream 445824 13661400 ~ 13661795 (+)
G80359 NA non-coding upstream 617405 13463375 ~ 13490214 (+)
G80578 NA non-coding downstream 462755 14573582 ~ 14574902 (+)
G80580 NA non-coding downstream 466497 14577324 ~ 14579064 (+)
G80588 bicc1,LOC108431656 non-coding downstream 482272 14593099 ~ 14607530 (+)
G80590 ube2d1a,LOC103029158,LOC108270474,LOC108431657,LOC107717106,LOC107553913,LOC107663272,LOC107733527,LOC105911631,LOC107583697 non-coding downstream 529290 14640117 ~ 14646367 (+)
G80662 NA non-coding downstream 710928 14821755 ~ 14822248 (+)
LOC103026193 reep3,LOC108431646,LOC105906120,LOC102789435 other upstream 155421 13925869 ~ 13952198 (+)
LOC103027475 fmn2a,LOC108431642,LOC107583499,LOC107750852,LOC107668605,LOC105906094 other upstream 300592 13721901 ~ 13807027 (+)
LOC103044397 pgrmc2,LOC108438735,LOC107711856,LOC107721516,LOC107654846,LOC107668512 other upstream 1828113 12223277 ~ 12279506 (+)
G79761 LOC108438749 other upstream 2031408 12064844 ~ 12076211 (+)
G79717 NA other upstream 2202234 11901095 ~ 11905385 (+)
LOC103028846 LOC108431654 other downstream 402583 14513410 ~ 14534923 (+)
G80648 NA other downstream 615100 14725927 ~ 14728799 (+)
LOC103029370 pygb,LOC107553065,LOC107663289,LOC107671137,LOC107717055,LOC107583638 other downstream 619681 14730508 ~ 14798604 (+)
LOC111193140 NA other downstream 677775 14788602 ~ 14803032 (+)
LOC111188193 LOC108431664 other downstream 695488 14806315 ~ 14835079 (+)

Expression


Co-expression Network