fosl2 (fosl2,LOC107656746,LOC107726077,LOC107553732)


Basic Information

Item Value
gene id fosl2
gene name fosl2,LOC107656746,LOC107726077,LOC107553732
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 34212417 ~ 34226780 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007248446.3
GGTAGTGCCATTGGAGTGAGTCATCGCGCGGAAAGGGTGGTCGCGGGAGCGAGCAGGAGGACCGGAGCGAGGGAGCGCGCATCTACTGAGTGGAAGGAGGCAGCACTGCCGCTCCTGTGAGTCAcatctacaaaaaaaactggagaaaaacagGAGGAGAACTGCGCTGAGTTTCATTTACTGAAAGTAGGTGAAATAAGAGACTTCTTACAACTTGTGTTAGTCACTCTAGCTTGGCTTACAGCGCTGGAAacatctttacttttttttatttcatttttattttttctacaaaaACCTGTTTACTGGACTATATGAACTATTTCTTGCACGCCTGctgctctcttttatttttattttatttttctctctattataacagtataacaaaaaataataataatacagaaagAAAACTGTACATCCGGACATTTAACCCTCTCTAAGCCTGATTTTTCTTCTGATTTTGTTAGGCTATTAtttctcacaacacacacatatatatatagagagagaaatatataattatatagtatattagcTCACTCCAAGGAAACCCCAGCTGTGGGTTGTCTttaagaaccaaaaaaaaacattttttttctccttttcggCTTTGGAAGTGCAAAGAAGACACTCTTCTGACTGAAAACGTGTGGGAGAACTCTACAAACCTgtgaatttttttctttctgtattttttcttttgctggaTCATGTACCAGGAGTACTCcgggagcagcagcagcgcctCCCCGGGCCAGCAGGACTCCTACCCCAACGGGAGCCCCCTCTCAGCCTCCAGCTACCAGAAGTACAGAGTCGACATGCCTGGCTCAAGCAGTGCCTTTATTCCCACCATCAACGCCATAACCACCAGCCAGGACCTGCAGTGGATGGTCCAGCCCACAGTCATCACCTCCATGTCCAACCCGTACACACGCTCACACCCGTACGGCCTGCCCGTGTCCAGCGGCCCCGGCCTGCTCAGCCACTCGGCTCTCGCCAGACCCGGGGTCATCCGGTCTATCGGGGACGCGCGGGGACGACGCAAGAGAGATGAGCAGCTGACgccagaggaagaggagaagaggagggtGAGACGAGAGAGGAACAAGCTGGCAGCTGCTAAGTGCCGAAATCGCAGGAGAGAGCTGACCGAGATGCTGCAGGGGGAAACTGAGAAGCTGGAGGAGGAAAAGGCTGATTTGCAGAAAGAGATCGAGACGCTGCAGAAGGAGAAGGACAAGCTGGAGTTCATGCTGGTGGCCCACAACCCGGTGTGCAAGCTGCCTCCGGACGAACGCCACCACAGCTCGCTTCCCCAGCAGTGCGCCCCTCTCCCGCTGACCATGCGCTCTGGCCTCACCCACCGCTCCCTCAACCCGGTGGTGGTAAAGCTGGAGCCCATGGAGGACGACGACGATGAAGACGAGGGCAAGAGCCAGCACTCCGTAATCAAGCCCATCTGCCTGGGCGGTGGCATTTACTGCTCCGACGGCGACAGCCTCAACACCCCAGTAGTGGGAGCATCCACCCCAGTATCCACCCCCGGCAACCCCAGCCTCATCTTCACCTACCCCAGCATACTGGAGCCTGAGAGCCCGTCGCCCTCGTCGGAGTCGTGCTCCAAAGCCCACcggcgcagcagcagcagcggagaCCAATCGTCAGACTCGCTCAACTCGCCCACTCTCCTGGCTCTCTGAGACCCTCGGAGCTCCTCAGCACCAAGCACTCTCGTTCAATCTCCAGCCGGGAAGTCCCAGGACCCTCCTAGGACCATCCCAGGACCTCATCTCTACAAAGCCGAGAACCCTCAAGGGCTAATTTGCTcgtttttatttaaaacgtcTCAGAAGGGAGTCTTTTTTGATGTTCTTatgttcttgttttgtttttatgtgtttgtgaAAATCAGAAGTTTTCACCCACTCGTCATTTCAACGACAAAGAACAACGGCATCTTGGCTGGACTAAGAAAAACACAATTGAGACTTAACAGAAGAACGAAAGGGGAAACTTTTGATTTTCCTCTGAGAATCGTCTGATTTTCACTCATGCTTGCTGCTGATCTGTCACAAGCGCTCTATGAAACCATCTGACCATTTGACGGTGGTTGggaaagtgttttttcattttttcattgctTGAGAGAAGATCAGGACTTTAAAAGGGATTGGCAAGGGATGCATCCCGTGATAGAAGGCGGGGCATGCGTCCCAGTTCGGTACAGTGTGGGATCGGACACTACAGAGTTAGTCGGACGTCCTCCTCGAAACCAGCTTGACGTACATTTAAGTACATTACATTGACTGCCCTTTGTATTTATGACCTGTGTGAATATTGTCCAGTTGTATATTGTGTCCTGCTGTTTTACGAAACCGTGCGTGTCAATCAAGGGTTCACTGGATGAGCCTGAAATTCCTCAGCGTCTCAAAgacggagagagaaagaaatgaacATGTATTATTAATGGCTGACCTCTTACCTGACTATACCTGGCAGAAGATCCATGGTAATGTTGCAgacttttacattatttttgctattgtatattaaaaagaaaaaaacaaagaagaaaaaaataacacttcaCTGAATTTTATTGTCAGGgatttttgtgtctgtgtgagtgagccacaCAAGCattactaaagaaaaaaaaaacacaaagcaatTGCACACAGCGTACAAAACATGTCAGAACACAGGGGTATCTACCTGAGGACAAACTAGCCATACCTAGCCATATTAGGTCCAGGCCTCCAACCCTTTACAAGGCAATACTGCTTTTTATTGGGCAGACACTGTGGTATTCAaataatgaggaaaaaaaatcaatgactATGTGTTACTTTTCTTATACTTTTCTAACTTACGGCTCCGTTTGATAGCTCAATAGCTGCCATGTTTTTGAAATAGAGTTTGAAAGTGAAAACGTACATGAAAGCGAGTTATTAGGACTAAGCCAAATCAATGGGCACGTCTCCCTCAAACGACGCAGGACGAGTCTTGAATGCCAGACCAGCCCAGACCATGGGACCAGATGCACTTTGTTACTGAAATCCTTAAAAAACAATCACTTTCCAGAAAGCATAAAGAATTGACCTGAGCTCAACTGATGTATGGCAGCGTAGGCTGAGACTCAACATCGACCAGATGCAGCTCCCATTGATTCTTATATTATACTTGCCAGTCGGGTGATGGCACATTTAACTCGAGCTTATACTTGACAGCCAGAGCATTGGCAAATGTGGGTTGGGCCGATTGGCGTATTACACTCAGCAGCCGGAGTGTCGGCACATCAGCCACACTCAGGCCGGATGTGAGCTGAGCATTTGGTCAGATTCTCAGAATGTGGTGGTCAGAGTGATATTTTTTGATATCTGGTTTAAAAGTCGAGCATACAGTTGAGCATACAGTCAAGCACCAACACTGAGACACTGCTAATTTCTTATCCCGACACCGGGTGTGAAGTTGTgacgaatatatatatatatatatatatatataatatatatatatataatatatatatataatatatatatatatataatatatatatataatacttgcaatatttcagaaaaaaaaaaatgtttacttcAAAAACATTCCTTTGGGAAGCAGACGGGACGGTGTGGAGGactcatttttcattttgtcattCTGTCATTTCGTCATCTCGTCATCTCTGCCAAGCTGAAGGGATCAGCTGATCAGTTAACCAGCTGTGTCTTCTGGCATAGATTTGAAGaaatattatttgaattttttctcatttttatttatgttgggATTTTTTTTGGGAAAGGCCACTAAGgatttcttttactttaatcaATGGAAGAGTGAATTAAGTTGTGGagaaaaatcaatcaatcaattcaatttaataccAAAAAAGAAAGTGTTTGACAACTTTCTGAGTTGTTTTGAGTTTTAACCAaccagtctgtctgtcagtcaatcagtcagtcagtctttGGGACCCTATAGATCTCTATGAGCTACAAGCCATCTGTAAACCCTCTGTACATGTCCTGCTTTCCGAGCaatcttttttcctcttttttaactgctttaactgttttaaagacagaaaaccacaacaaaaacagcaatatGTATGTCAGTGTTTGTTCCTTTGGTTATTTAAATGgattattctaataataataaaaaaaaatgcaatggtATTCTTGATAGTTGTACTTTTGCTTGTCCACTGAGTTTGATTATGTTGGTGGGTATCTCATGATTGTTAGAGTTCGCTACTtacttctttgtttttcttaagtCAGTCTATACTTGGCTGAATGCACCTCTCTCATCCATCGGTGAGCCACTCGACTACTCGCTACTCGCAGTTTCCTGTAGGCAATAACACTGCGCCATCATCCATAGTGCCTCTATTGTCAGTGATTTTGACATATAGTTGTATGCAAACCTGCACTACTTACTCTCCAGAGAAATTGGCAATAGATAGTGTGTCACTGGTAATAAGCAACATTGCCATTTTTTGTCCAGAAATGCTTTATTCACAGCCATAAACAGTCTACAGGGCTTATTATATCAAACTATCTACATGATTTAGCCATATGGTTTTGGCCAAAGACACAATAAGAGCCATCAATGACCAAAAGCATTGTggatatatttaaacattcatttaatttaagaaaaaatcaatttgataaaatgatGCACGAACACACAGACTTAAAGCACATGGTTCTAAACTTCTGGCTCATTCTCAATACGTagagatttaaaaaagtttcctgAAGCAGAACTAGGCGGTGGGCACGGTGCATTTGGTACCCGATATCATGTCTCTTTTCTGAACATGACTGGATAACGCAGTATTTCACATGATCAAATGATAATAAACCATGATTCTTTACTTTTCGTTGACATCTCTTGGTGTTAGGAGTGAAATGATATATTTCAGAATCATTCAAAAGCTTTTACAGTTGTGtttggagctgtgtgtgtgtctgttgtgaTCAAATGTCTTActttcaaataaatataaaagaaaaaaga
>XM_007248447.3
GGTAGTGCCATTGGAGTGAGTCATCGCGCGGAAAGGGTGGTCGCGGGAGCGAGCAGGAGGACCGGAGCGAGGGAGCGCGCATCTACTGAGTGGAAGGAGGCAGCACTGCCGCTCCTGTGAGTCAcatctacaaaaaaaactggagaaaaacagGAGGAGAACTGCGCTGAGTTTCATTTACTGAAAGAGTACTCcgggagcagcagcagcgcctCCCCGGGCCAGCAGGACTCCTACCCCAACGGGAGCCCCCTCTCAGCCTCCAGCTACCAGAAGTACAGAGTCGACATGCCTGGCTCAAGCAGTGCCTTTATTCCCACCATCAACGCCATAACCACCAGCCAGGACCTGCAGTGGATGGTCCAGCCCACAGTCATCACCTCCATGTCCAACCCGTACACACGCTCACACCCGTACGGCCTGCCCGTGTCCAGCGGCCCCGGCCTGCTCAGCCACTCGGCTCTCGCCAGACCCGGGGTCATCCGGTCTATCGGGGACGCGCGGGGACGACGCAAGAGAGATGAGCAGCTGACgccagaggaagaggagaagaggagggtGAGACGAGAGAGGAACAAGCTGGCAGCTGCTAAGTGCCGAAATCGCAGGAGAGAGCTGACCGAGATGCTGCAGGGGGAAACTGAGAAGCTGGAGGAGGAAAAGGCTGATTTGCAGAAAGAGATCGAGACGCTGCAGAAGGAGAAGGACAAGCTGGAGTTCATGCTGGTGGCCCACAACCCGGTGTGCAAGCTGCCTCCGGACGAACGCCACCACAGCTCGCTTCCCCAGCAGTGCGCCCCTCTCCCGCTGACCATGCGCTCTGGCCTCACCCACCGCTCCCTCAACCCGGTGGTGGTAAAGCTGGAGCCCATGGAGGACGACGACGATGAAGACGAGGGCAAGAGCCAGCACTCCGTAATCAAGCCCATCTGCCTGGGCGGTGGCATTTACTGCTCCGACGGCGACAGCCTCAACACCCCAGTAGTGGGAGCATCCACCCCAGTATCCACCCCCGGCAACCCCAGCCTCATCTTCACCTACCCCAGCATACTGGAGCCTGAGAGCCCGTCGCCCTCGTCGGAGTCGTGCTCCAAAGCCCACcggcgcagcagcagcagcggagaCCAATCGTCAGACTCGCTCAACTCGCCCACTCTCCTGGCTCTCTGAGACCCTCGGAGCTCCTCAGCACCAAGCACTCTCGTTCAATCTCCAGCCGGGAAGTCCCAGGACCCTCCTAGGACCATCCCAGGACCTCATCTCTACAAAGCCGAGAACCCTCAAGGGCTAATTTGCTcgtttttatttaaaacgtcTCAGAAGGGAGTCTTTTTTGATGTTCTTatgttcttgttttgtttttatgtgtttgtgaAAATCAGAAGTTTTCACCCACTCGTCATTTCAACGACAAAGAACAACGGCATCTTGGCTGGACTAAGAAAAACACAATTGAGACTTAACAGAAGAACGAAAGGGGAAACTTTTGATTTTCCTCTGAGAATCGTCTGATTTTCACTCATGCTTGCTGCTGATCTGTCACAAGCGCTCTATGAAACCATCTGACCATTTGACGGTGGTTGggaaagtgttttttcattttttcattgctTGAGAGAAGATCAGGACTTTAAAAGGGATTGGCAAGGGATGCATCCCGTGATAGAAGGCGGGGCATGCGTCCCAGTTCGGTACAGTGTGGGATCGGACACTACAGAGTTAGTCGGACGTCCTCCTCGAAACCAGCTTGACGTACATTTAAGTACATTACATTGACTGCCCTTTGTATTTATGACCTGTGTGAATATTGTCCAGTTGTATATTGTGTCCTGCTGTTTTACGAAACCGTGCGTGTCAATCAAGGGTTCACTGGATGAGCCTGAAATTCCTCAGCGTCTCAAAgacggagagagaaagaaatgaacATGTATTATTAATGGCTGACCTCTTACCTGACTATACCTGGCAGAAGATCCATGGTAATGTTGCAgacttttacattatttttgctattgtatattaaaaagaaaaaaacaaagaagaaaaaaataacacttcaCTGAATTTTATTGTCAGGgatttttgtgtctgtgtgagtgagccacaCAAGCattactaaagaaaaaaaaaacacaaagcaatTGCACACAGCGTACAAAACATGTCAGAACACAGGGGTATCTACCTGAGGACAAACTAGCCATACCTAGCCATATTAGGTCCAGGCCTCCAACCCTTTACAAGGCAATACTGCTTTTTATTGGGCAGACACTGTGGTATTCAaataatgaggaaaaaaaatcaatgactATGTGTTACTTTTCTTATACTTTTCTAACTTACGGCTCCGTTTGATAGCTCAATAGCTGCCATGTTTTTGAAATAGAGTTTGAAAGTGAAAACGTACATGAAAGCGAGTTATTAGGACTAAGCCAAATCAATGGGCACGTCTCCCTCAAACGACGCAGGACGAGTCTTGAATGCCAGACCAGCCCAGACCATGGGACCAGATGCACTTTGTTACTGAAATCCTTAAAAAACAATCACTTTCCAGAAAGCATAAAGAATTGACCTGAGCTCAACTGATGTATGGCAGCGTAGGCTGAGACTCAACATCGACCAGATGCAGCTCCCATTGATTCTTATATTATACTTGCCAGTCGGGTGATGGCACATTTAACTCGAGCTTATACTTGACAGCCAGAGCATTGGCAAATGTGGGTTGGGCCGATTGGCGTATTACACTCAGCAGCCGGAGTGTCGGCACATCAGCCACACTCAGGCCGGATGTGAGCTGAGCATTTGGTCAGATTCTCAGAATGTGGTGGTCAGAGTGATATTTTTTGATATCTGGTTTAAAAGTCGAGCATACAGTTGAGCATACAGTCAAGCACCAACACTGAGACACTGCTAATTTCTTATCCCGACACCGGGTGTGAAGTTGTgacgaatatatatatatatatatatatatataatatatatatatataatatatatatataatatatatatatatataatatatatatataatacttgcaatatttcagaaaaaaaaaaatgtttacttcAAAAACATTCCTTTGGGAAGCAGACGGGACGGTGTGGAGGactcatttttcattttgtcattCTGTCATTTCGTCATCTCGTCATCTCTGCCAAGCTGAAGGGATCAGCTGATCAGTTAACCAGCTGTGTCTTCTGGCATAGATTTGAAGaaatattatttgaattttttctcatttttatttatgttgggATTTTTTTTGGGAAAGGCCACTAAGgatttcttttactttaatcaATGGAAGAGTGAATTAAGTTGTGGagaaaaatcaatcaatcaattcaatttaataccAAAAAAGAAAGTGTTTGACAACTTTCTGAGTTGTTTTGAGTTTTAACCAaccagtctgtctgtcagtcaatcagtcagtcagtctttGGGACCCTATAGATCTCTATGAGCTACAAGCCATCTGTAAACCCTCTGTACATGTCCTGCTTTCCGAGCaatcttttttcctcttttttaactgctttaactgttttaaagacagaaaaccacaacaaaaacagcaatatGTATGTCAGTGTTTGTTCCTTTGGTTATTTAAATGgattattctaataataataaaaaaaaatgcaatggtATTCTTGATAGTTGTACTTTTGCTTGTCCACTGAGTTTGATTATGTTGGTGGGTATCTCATGATTGTTAGAGTTCGCTACTtacttctttgtttttcttaagtCAGTCTATACTTGGCTGAATGCACCTCTCTCATCCATCGGTGAGCCACTCGACTACTCGCTACTCGCAGTTTCCTGTAGGCAATAACACTGCGCCATCATCCATAGTGCCTCTATTGTCAGTGATTTTGACATATAGTTGTATGCAAACCTGCACTACTTACTCTCCAGAGAAATTGGCAATAGATAGTGTGTCACTGGTAATAAGCAACATTGCCATTTTTTGTCCAGAAATGCTTTATTCACAGCCATAAACAGTCTACAGGGCTTATTATATCAAACTATCTACATGATTTAGCCATATGGTTTTGGCCAAAGACACAATAAGAGCCATCAATGACCAAAAGCATTGTggatatatttaaacattcatttaatttaagaaaaaatcaatttgataaaatgatGCACGAACACACAGACTTAAAGCACATGGTTCTAAACTTCTGGCTCATTCTCAATACGTagagatttaaaaaagtttcctgAAGCAGAACTAGGCGGTGGGCACGGTGCATTTGGTACCCGATATCATGTCTCTTTTCTGAACATGACTGGATAACGCAGTATTTCACATGATCAAATGATAATAAACCATGATTCTTTACTTTTCGTTGACATCTCTTGGTGTTAGGAGTGAAATGATATATTTCAGAATCATTCAAAAGCTTTTACAGTTGTGtttggagctgtgtgtgtgtctgttgtgaTCAAATGTCTTActttcaaataaatataaaagaaaaaaga

Function

symbol description
fosl2 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within regulation of cardiac muscle cell myoblast differentiation. Predicted to be active in nucleus. Is expressed in head; presumptive bulbus arteriosus; presumptive cardiac ventricle heart tube; and trunk. Orthologous to human FOSL2 (FOS like 2, AP-1 transcription factor subunit).

NR:

description
fos-related antigen 2 isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09030 FOSL2; fos-like antigen 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007248446.3 True 5055 mRNA 0.43 4 34212417 34226780
XM_007248447.3 False 4516 mRNA 0.44 5 34212417 34226780

Neighbor

gene id symbol gene type direction distance location
babam2 bre,LOC107553730,LOC107656747 coding upstream 29062 34012757 ~ 34183355 (+)
slc4a1ap NA coding upstream 362908 33831270 ~ 33849509 (+)
c9h2orf71 NA coding upstream 1140451 33061183 ~ 33071966 (+)
LOC103035281 NA coding upstream 1154720 33042845 ~ 33057697 (+)
LOC103035585 LOC108423467 coding upstream 1289417 32729119 ~ 32923000 (+)
mocs1 mocs1,LOC107656745 coding downstream 16339 34243119 ~ 34264685 (+)
LOC111193251 NA coding downstream 71943 34298723 ~ 34301134 (+)
kif6 kif6 coding downstream 267045 34493825 ~ 34633946 (+)
LOC103040539 LOC103040539,LOC108423401,LOC108270190 coding downstream 411059 34637839 ~ 34643223 (+)
LOC103040842 LOC103040842,LOC108423400 coding downstream 421284 34648064 ~ 34660780 (+)
G85591 NA non-coding upstream 259044 33854317 ~ 33953373 (+)
G85602 NA non-coding upstream 263151 33946197 ~ 33949266 (+)
LOC111193250 NA non-coding upstream 283292 33926162 ~ 33929125 (+)
G85596 NA non-coding upstream 320835 33891012 ~ 33891582 (+)
G85588 NA non-coding upstream 360029 33852188 ~ 33852388 (+)
LOC111193252 NA non-coding downstream 45152 34271932 ~ 34319416 (+)
G85700 NA non-coding downstream 256799 34483579 ~ 34517443 (+)
G85710 NA non-coding downstream 349067 34575847 ~ 34576218 (+)
G85709 NA non-coding downstream 409726 34636506 ~ 34637200 (+)
G85834 NA non-coding downstream 969136 35195916 ~ 35196276 (+)
LOC103037843 pnrc2,LOC108441235 other upstream 1771099 32436217 ~ 32441318 (+)
LOC103035447 vegfa,vegf,LOC106584182 other upstream 1993655 32199183 ~ 32218762 (+)
G85189 NA other upstream 2388029 31823586 ~ 31824388 (+)
LOC103034273 LOC103034273,LOC108415529 other upstream 2407014 31749703 ~ 31805403 (+)
pnisr pnisr,LOC102782257 other upstream 2742861 31454984 ~ 31469556 (+)
G85740 zdhhc14 other downstream 520034 34746814 ~ 34800377 (+)
tfb1m tfb1m,cldn20,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299 other downstream 1061435 35288215 ~ 35339832 (+)
LOC111193254 NA other downstream 1410030 35636810 ~ 35658087 (+)
LOC111193255 NA other downstream 3257241 37484021 ~ 37503882 (+)
bcl11b bcl11b,bcl11ba,LOC108270293,LOC107588284 other downstream 3602975 37829755 ~ 37933289 (+)

Expression


Co-expression Network