kcnk5 (kcnk5)


Basic Information

Item Value
gene id kcnk5
gene name kcnk5
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 34705038 ~ 34735575 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007248450.3
CTGTGCACGTGGCCGCAGAAAAGCTCACAGTTCAGGAGCACCGGCTCCAGCACTCTATAACACCACTAacccactgctgctgctgctgctgttgttctccACTGCCCCTGTTATTGCCCCCGTTACTGCCCCTGTCCTGCCCTGTTACTGCCCCACCCGGCCACAGTTCAGCGGGGCTCAGCGGCTCTCATGCGGATCCGAGACGGGCTTGGACCTCCTCCTCCCCCAAACAACTCGTGAGAAAGCCGGGGGCTTTGGCGCGTAATTAGAGCGGCTGGTGCTGGTGGATGGGCAGGGTGGAGGCTCCATTATGGTGGATAAGGGTCCCCTGCTGACCTCGGCTATTATCTTCTACCTGTCCATCGGGGCAGCGATATTCCAGGTGCTGGAGGAGCCCAACTGGAAGCTGGCAGTGGACCAGTACAATGACAAGAAGGAGAAGATCCTGAAAGACTACCCCTGCCTCACTAAATATGACCTGGACAAGATACTGGAGGTGGTGTCTGAAGCTGCTGGACAAGGTGTCACCATAACGGGAGATAAAACCTTCAACAACTGGAACTGGCCCAACGCCGTCATCTTCGCTGCTACAGTCATCACGACTATAGGTTATGGCAATATTGCCCCCAAAACACCGTCAGGACgggttttctgcattttttatgGACTGTTTGGTGTCCCACTTTGTCTCACCTGGATCAGTGAACTCGGCAAGTTTTTTGGTGGAAGAGCAAAACATCTTGGACAGTATCTCACCAAGAGAGGAGTCACACTGCGGAAAGCACAGTTCACCTGCACAGCCATCTTCCTGTTGTGGGGGGTATTGGTTCATTTGGTTATTCCTCCATTCGTCTTCATGTCTCAAGAGGGCTGGACCTACATAGAGGGGCTGTACTTTTCATTTGTGACTTTGACCACTATTGGATTTGGTGATCTTGTAGCAGGTGTGGACCCTAATGCAGACTACCCGACTCTTTATCGCTACTTTGTGGAGGTGTGGATATACCTAGGCTTGGCTTGGCTGTCTCTCTTCTTTAACTGGAAGGTGCGGATGGTCATCGAGGCCCACAAGGCTCTGAAGAAGCGGCGGAAGCGGCGCAAGTTATCGCTGGACGAGCTGCGGCACTACAAAGAGAACCACAAAGCCCTGCACCTGCCAGCCAACGGTAACGAAGTCAACATATTCAGCTTCCTGAGCAAGAGACCGGAGGGCTATAACGACCTCATCAAGCAGATCGGCGCCAAGAAGGAAGGAGGAGGACAGTGTGCCAATGGCGTCGCCGGTAACAAGTCTAAAGAATTCAGCCGATCTAAAAGCTGCAACGATGCTGTTCCTCTTAACGGAAATACTATTCTTAACCTGGACCGATCTCCTCGGCAAAAACGGCGCTACAGCTTTAGCGACCGTGTGACTGTGGCCTTCTCCAAGTCCAAGAGTTACCTGCTTGGGCAGGAGGGAGGACCTCTGCTCAACGAGATGCAGGGTGATGGAGATGTGGAGGCAGACCTTGGAAGAATGTACGAAAATCAGTTAGATAAAGAAGCGGGCGAAGAACATCGAAATCTTGGACCTGGAGGACAGTGCAACATGTGGGAGTCCAAAGAGTACCAGCCACTCATCTTCCCCAATGCCAACATCACCTTCATCGACGAGGAGAATCTTCTGAACAACAacctggaggaggaagaggaggatgatgatgatgacgacaCAAAGCCTAAACTCTCAACGTCTGACGAAAACGTCGAATCAGAGACCGATTCCAAAGAGGAGCAGTGCTCCGAATCTGACGGCTCCGTCTTCACGGACAGGTCGGATCACTGCCACTCCTACGAGCAGCTGGTAGAGGAGTACTCCAAGGAAGAAAACACCGAGACCTGACCTAAGACCTGAGTTATACCGGTTGAAATCATGGACCTataaaaaccacaaaaaaaaaaactctcagtGAGAGTTTACTGTGTTATATTCttccttctcttttttgttgttgttagttTTGGTAAATTCTGGACATTTTGCACAAACTTGAAgacgtttttttgtttctcatgcCAGACTTGATCATACAAGCATCCTTGCATTCTTCCATGTATGTGAAGCATCACAAAGGTTTTGTTGGTGATATTCTCATCAAAATGGAACTGTGAAGTGCATTTCAGTCAGTATTACATCAAGATAAGAAGCTGTGGACAGTTTTGACCAAAACAAAGCTAAACATCCACAgtttattaaagcagcagtccctaagatttttaatttgagGAGTTGTGAGGGaacaaaacattcaaattaaTGCTATCAGTGTCCTGGCATGAGCAGACCTAACAAGAACTAATACAATATATTCATTCTGTAAAAGAATTAaaagagtggtctggtaggtttgttggatttAGATGCTCTTTACATTTTGACAGTTTgtcataaattaaaaacaattgaaCTAAGCGATAtgctcaaaaacacaaaacttagcctaaattaaattaaaagtactattcaacatgctctgtgcaattacacacttTCACCacagaggtctctaaatccccaagtGCCCAAAACCTTcggactgttgctttaaaattCCTGTACGCTGACTCCATAAAAATGGTCTAGATAGATGTTTTTTATAGATGTTTCTAATGAAGACTTCTTGATAGTTGCCAAGTTATGCAGGGGTTTGTTTCTAGTATTGGAATAATATAGCTGTAATTTATTAGATTAAGTTAGATTAAGAAACACATTAGTCTGAATGAAATGAACTGCTGAATCAGTTGTAATGGATCTGTGGGTCATAGGATGGATAGGATACAAGTAATTGGGAGAGGTGGTTCTATTGAGAACTGCTCCTGGTTCTCTGACTTTTATACACCATAttggtgttttttattattatcgtAACATAATGAAGGAAAAACACTGCCTGCATTGTCACCCATTTTTATGGGTTttgtctttctgtttttatgaTGCCGTTTTAGGGCCAGTGTTGAAAATTAAAACGGGAGACTTTGagattaaagtcataatattttgggAATAAAGTCATAAAATTACAAGGTTAAAGTGGAATTGCTGCCATTAAAAGGCTAAATATTAAGGGCAATGGATTTACAGAAGGAAAGCAACTTCAGTGTGCTAAAATGAGGGATGCTGAGGAAcgttaaatacaatatattcttaaataaagTCTTTGACCTTAATAATGCAATCTCCCTAGTAGTACACCACATTATCcttaaaatattactattaactTTGTTCTCAAAATAGCACAACTTTATTCTTCAAGTATTACGACTTTTTTCTCTACAAataatgactttattctcaaagtctacacgtttttatttatttaacagtggCTCTACAATGTCATCATAGTTTTTAAACTAATTATCACCGGTTCCCAGTGTAATCATACATTTGATCATGAAGGCTGCACATGCTTCCTATATGGGGCATGCAAACTCCACCATGTCTTAAATGCATCTTGGTGccaccattaaaaaaaagtacattgacCTGTAATGTAAAGTACTGTGGAAAAGAAGAGGAGGGCTATCCTGCTGTCCGGTACTTGGGAATGCATTCGATCAGTTGCAGTACCCCCGGACCTCCTTCTGTGGACAGCACATGTTGCACTGCTCTGATTAAATCTGTTGAGTTCggttgagttgagtttttaCTGGTGTACCACTCCATCCACATTGCATCACATTGTTTTTGTTGCAATGTCATTTCATTTCAAGGTCTTTTATTGCTGGCTAAGACCTTATTTTTCGTATTTTTTGTAAAGTATTTTGATTTTaagttaatatttgtttttactggACAGAACATATGTATCTTTAGACTAGACCCCTGTTTTAAATGTGGATATACTATGTAAAAGTGGTAAACAGAACCTCAAGAACACCTAAATGTTCAAGGTGTTTGTAAATCCCAATTATTATGAATTTAATATTCCGGTGAAGttgaaaataaactatttttaaataca

Function

symbol description
kcnk5 Predicted to enable potassium ion leak channel activity and voltage-gated potassium channel activity. Predicted to be involved in potassium ion export across plasma membrane and stabilization of membrane potential. Predicted to act upstream of or within potassium ion import across plasma membrane. Predicted to be integral component of plasma membrane.

NR:

description
PREDICTED: potassium channel subfamily K member 5

GO: NA

KEGG:

id description
K04916 KCNK5, K2P5.1; potassium channel subfamily K member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007248450.3 True 4010 mRNA 0.43 5 34705038 34735575

Neighbor

gene id symbol gene type direction distance location
LOC103040842 LOC103040842,LOC108423400 coding upstream 44258 34648064 ~ 34660780 (+)
LOC103040539 LOC103040539,LOC108423401,LOC108270190 coding upstream 61815 34637839 ~ 34643223 (+)
kif6 kif6 coding upstream 71092 34493825 ~ 34633946 (+)
LOC111193251 NA coding upstream 403904 34298723 ~ 34301134 (+)
mocs1 mocs1,LOC107656745 coding upstream 440353 34243119 ~ 34264685 (+)
LOC103028138 gnmt,LOC107748599,LOC107566124,LOC107706413,LOC107553737 coding downstream 31487 34767062 ~ 34786115 (+)
LOC103028446 LOC108423447,LOC108269492 coding downstream 51775 34787350 ~ 34792462 (+)
LOC103041454 NA coding downstream 529358 35264933 ~ 35269468 (+)
LOC103042380 LOC108437745 coding downstream 932125 35667700 ~ 35686642 (+)
LOC103042687 kif13b,LOC107751739,LOC107583481,LOC107755780 coding downstream 1060575 35796150 ~ 35873071 (+)
G85709 NA non-coding upstream 67838 34636506 ~ 34637200 (+)
G85710 NA non-coding upstream 128820 34575847 ~ 34576218 (+)
G85700 NA non-coding upstream 187595 34483579 ~ 34517443 (+)
LOC111193252 NA non-coding upstream 385622 34271932 ~ 34319416 (+)
G85602 NA non-coding upstream 755772 33946197 ~ 33949266 (+)
G85834 NA non-coding downstream 460341 35195916 ~ 35196276 (+)
G85835 NA non-coding downstream 476032 35211607 ~ 35218417 (+)
G85845 NA non-coding downstream 595659 35331234 ~ 35331537 (+)
G85842 NA non-coding downstream 606782 35342357 ~ 35349126 (+)
LOC111193253 NA non-coding downstream 615252 35350827 ~ 35364586 (+)
LOC103037843 pnrc2,LOC108441235 other upstream 2263720 32436217 ~ 32441318 (+)
LOC103035447 vegfa,vegf,LOC106584182 other upstream 2486276 32199183 ~ 32218762 (+)
G85189 NA other upstream 2880650 31823586 ~ 31824388 (+)
LOC103034273 LOC103034273,LOC108415529 other upstream 2899635 31749703 ~ 31805403 (+)
pnisr pnisr,LOC102782257 other upstream 3235482 31454984 ~ 31469556 (+)
G85740 zdhhc14 other downstream 11239 34746814 ~ 34800377 (+)
tfb1m tfb1m,cldn20,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299 other downstream 552640 35288215 ~ 35339832 (+)
LOC111193254 NA other downstream 901235 35636810 ~ 35658087 (+)
LOC111193255 NA other downstream 2748446 37484021 ~ 37503882 (+)
bcl11b bcl11b,bcl11ba,LOC108270293,LOC107588284 other downstream 3094180 37829755 ~ 37933289 (+)

Expression


Co-expression Network