clec14a


Basic Information

Item Value
gene id clec14a
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 23309045 ~ 23312366 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251888.3
GTAATCTTTTTctactgttttctgtgtgtttggaTTCATCTGTCACTTTGCTGTGTGAGTTGCTCTGTGGGAGCGGGCTGGGAATGCTCTGGTAATGCGAGCAGTTAGTTCGTTTCAGAGTTGCTATTGTTTTGCTTCACCAGCACCACCACCCTAGAGGAAGTGGGGCTCCGTATCAAGGCTGAGCACGCTTCCTGTGCTTGTTGTCTTGGGAGGACCTTACAGAGCGACTAAGAAAGTGCATACAAAGTAGTAGGTCCCAAACAGTGAGAGGCAGGAGGCTGAGAGACAGGCACTGCTGACGGACACAAGgcacagaagagagagaggcatgGATTACTGGACTGGATTATGTTTTCTCAACATTCTGAATGTTGTCTTCACCACTCCTGATATGTTCTACACTGTACACATGGACAAAAAAGCATTTGACGATGCTCAGGGATCCTGTAAGCTGGATAAAGGTTTTTTGACCAACATGGAGAATCAGGGTGAAATTGCTAAGATTCTTCAGGCCATTGAGAACAAGGGAGACATCACCATGACTTCATTCTGGATTGGATTAAGGAAAGAAAAGAGTGATTGTGTTCAACCCAATCTTCCACTCATGGGTTTCTCCTGGATTATAGGTAATAGCACAGAATTTGATGCTAGTAAGTGGAAATCAGAACCTCAACGTACTTGCACTAGTGCTCTTTGTGCACTACTCTCAGTGACGTATAAAGGATCTACAATAGAAAGCTGGCAGTTTGTCTCTAGCGGCTGCAAGCATGCATATCCCTTTGTTTGCAAACGTGAAGGACAGCGTGAGCAGTGGCCATGCCCTTATCCGACAATGCACGGGAAGGCTGACATCATGCAAAAACATCATGATCCCTACACTCTTCAGGTGACTTGTAATAGTGGGCCCAGTTTCACTCTGACCTGTTCACAGAGCACGCGTGAATGGAGGCTGCAAAACCAACCAGACACAGACATATCAGGACTTTGCATGGAATGTAACCAGGGCTACAGAAAGGATAAACAAGGATTCTGTGTGGATGTGGATGAATGTAAAGAACCCCATGTATGCAAGCATAAATGCATGAACACGCTGGGTTCTTACAAGTGTAAGTGTCCAGACACACATGGTATGGATGGTAAGGACTCAGACAACTGCAGTGAAGCAGGAAACGTGGACCCTAGCCATGAATCTAGCCATGGGTTCCAAGATAACCCAACTCCCTCTACTATGGATGAAGGGAGGCATTCTCCCTCAGTTCGACCAGAAAGCACAACTGaggacagtgttcattttgaagGAAACACTGGTGACCTGTCCAACATCATCATTCCTGTGATTATAGCTCTGCTGATCTTCGTAGTGCTGGTCGTGATCACCGTGGCCATCGTCAAATGCTGCCTCATAAGACGCTCTAAGAAACGGGCCAAAAAAAGAGCTGAGGTCTCCAAAGAGTCGATGGCTTTGAATGGGTCAGACTCCATGGAGAAGGTCAGTGACAGAGAGGTGATCTAATACAGTGGAATGCCCTGGTCGAAGTGGGGAATTCTATCACAGACTCACAGTATTCttaaagaacttttaaagtGCCTCAGAGACAATGAATGTACAGTACAAACTCTTCCCTTCAAACGCTTGCCTTTTCAGTTTTACTCTGAAATCATGCTGTTTTACAATCAGAATCAGGGTGCTGGTGCATAATGCAAAGATTATAACAGTTTGTTTTGTAAAGACTAAAACATCCATGGACTTTTTGCATTAAAACGTTTCTGGTCTTTGTGTTGGACAAGGTAATCAGGACaatttacattataaatgtCAGTGTAACATCTTTCATATACTCTGTGTAATATGACTGgaagtcttaaattaaaatctgatgAAACTGTTAAAAGACAGACATCAATACATGTATGTACGCCTTGTTATGGCAAAGACAAAAATATCAAGTGATAATGTCTTATTTTCTCAGAACAAAATGATTGTAAGAAAATGACAATAagacaataaaactaaatgctGTGTAAGCTGTATCCATAAGCTTTCAGGTAATGTGCATGCACgaataaagaaaacatggaTGCAGAGTTTGGATAAAAAACTTTGCCAGAatccatattcatatttaacacTGAGCATAAATAATCCATAAGCTGACCTGATTTAAATATGGTACATTCCTACTACATTGGATATTACTATAtccaactattttgagttaaataataaacatttgtgGCAACATGTATATtcaaactaataaaatattcaatacatttttgaatttatttttttgccattgaCTAACTCAAATATACCATTTCCTTCTGGattggcacaatctatttgcatactggttATGTCCTACAGTTCCTGACCTCTGAAACtcgccatcagtgtgtagtgattactCCAGTCTGCCTTAGGTCATATATAATGATTCACTATCTGTAGTAGGTTGTAAGAGCAAGCATTCTAttctgagctgctaactctgTGTTGGCTATGTGCTATACTGTTCACAATATagagttttctttttctttctaattgTCTGTCAGTATTTCAATATATAATCTATTTTTTActtacataaattaaaaaatacaaatcaatttatTAACCTGTCCATAATATTCAAAGTAGAATTATGTGTGCAAGCaattgatataacaaaaaacatcaagTTAATTAACTTACAAtttatgaataataattaaaagctGTAAATCTAATTAACTCACgttttttattactataaaCAATAGGCAACACATTATCTTAAATTATTCAAGTAAATTGAACATATCCAGTCTTAAAGTGTAGGGGAAACACTTCCTGCATGTGTATTCTTTAATGCACAGTAGGTGAGAAAAGAAACACCACAGCACTAAACAGAACATCACAGTTTACGATGCACCAGTCTCACTTCCTCATTAGTTTGCCTACATTCTTCTACCGCTGATTGTATAGAATATTAATTATGTAGGGGTGGGAAACCCCTCCCCTTCTGCTCTCCAGAGGGAGTATTAATCTCAAgggttgtttatttttattagtattttagcaGATTTAGGAAACTCTCGACCTGAGTATTTAAGAAAACTAGAAAAATCTAGCGaaactatttttaatgataTGCGGTTGTGTGGTCTTCGGTAAAACACTGTCCCAATAATACACTCACTGTCTGagaaaaataacaatgtaaatattccCTCTAAGGTACAGCCTCTACATTTACTCTCTCAGAATGGAATTGCAAATATGTAGTTTTTCTGAAAAATGATCtatgtcataaaaataaaggtgctacaaaga

Function

NR:

description
C-type lectin domain family 14 member A

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction
ko05410 Hypertrophic cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251888.3 True 3322 mRNA 0.39 1 23309045 23312366

Neighbor

gene id symbol gene type direction distance location
sec23a sec23a,LOC107689296,LOC107589610 coding upstream 41183 23250660 ~ 23267862 (+)
srp54 srp54,LOC107729255,LOC107693187,LOC107733904 coding upstream 60196 23242171 ~ 23248849 (+)
npas3 npas3 coding upstream 154460 22857844 ~ 23154585 (+)
akap6 akap6 coding upstream 464667 22711082 ~ 22844378 (+)
LOC103036290 psmc1,LOC108443803 coding upstream 616885 22686731 ~ 22692160 (+)
foxa1 foxa1,LOC106611236 coding downstream 53065 23365431 ~ 23368635 (+)
tyro3 tyro3,LOC107693181,LOC107729301,LOC107586589,LOC107689305,LOC107589665 coding downstream 141635 23454001 ~ 23473086 (+)
LOC103028567 NA coding downstream 162893 23475259 ~ 23498557 (+)
LOC103030470 mapkbp1 coding downstream 193290 23505656 ~ 23549535 (+)
LOC103031726 tbpl2,LOC107729258,LOC107586674,LOC107693101 coding downstream 246686 23559052 ~ 23563050 (+)
G82606 NA non-coding upstream 82135 23225765 ~ 23226910 (+)
G82596 NA non-coding upstream 100246 23208495 ~ 23208799 (+)
G82588 NA non-coding upstream 103601 23204815 ~ 23205444 (+)
G82579 eapp,LOC107733856,LOC107729290 non-coding upstream 114755 23127953 ~ 23194290 (+)
G82748 NA non-coding downstream 160838 23473204 ~ 23473455 (+)
G82754 NA non-coding downstream 186353 23498719 ~ 23499013 (+)
G82753 NA non-coding downstream 186670 23499036 ~ 23552919 (+)
G82763 NA non-coding downstream 268782 23581148 ~ 23581751 (+)
G82766 NA non-coding downstream 278134 23590500 ~ 23590893 (+)
G82609 baz1a other upstream 77727 23230430 ~ 23231318 (+)
G82488 NA other upstream 950910 22357644 ~ 22358135 (+)
ralgapa2 ralgapa2,LOC107687934 other upstream 1635607 21520907 ~ 21673438 (+)
G81763 NA other upstream 3635407 19673127 ~ 19673638 (+)
G81761 NA other upstream 3642998 19665736 ~ 19666047 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other downstream 563073 23875439 ~ 23877770 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 597316 23909682 ~ 23973975 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other downstream 827023 24139389 ~ 24142232 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 1583528 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 1621798 24934164 ~ 24936186 (+)

Expression


Co-expression Network