LOC103028567


Basic Information

Item Value
gene id LOC103028567
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 23475259 ~ 23498557 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251893.3
GCGTCACAACACGCACGCACAGTTTCGAGGGTGAGACGCACGGTATGATATTTTGAGCGCAATACAGGCAGACATAAACAGGGAGAACGACATATTTACTCGCAGGCATGAGGAGCGGCGCGGGTTTGAGATGGTGAGAGGGCGTGAGGTAAAAGCCTTCGACGTGGGATTTGAAACGCGCGCGCCTATTAAGGACCAAGACTCCCCCCGTGCTCAGGCATCTGCACACCTTTTGCTCGTGTTGCGATTCACCCGCCATTCGGCGCTGTTCGACGTGCACGTTTCTCCGGCCTGGTCGAGGCAGAGCGGCGTCGGCGACAGTAACTCGACGTCCCGTGACTCAGAGGATGTTGAAAGATCAAACATGAGTCTGAGGTAAAGGAGTCTTCCGATGACTCTAGCACTCCAATGGCCGTCCCAGACAAGCAGGCCATAATGGTGATTCACCAGGAAGGCATGACCACATCTGGACTGGCACCTAAAGCTTCTTCCCCTCGCTCACTTTTTGTTGTCCTCAAACCGCTACATGCTGGAGGCGGAGGGCAGGACGAAGGAGCTCTCCTGGCTAATAACAACGGCACGTCTTTGGGGACACCAACTGTTGGCTTCCAGAGGTTATCATCCATATCCTTGTCAGCTATGGCAGACAccaacaacagtaatcagctaTGGAACTTGCCTGCAGAGATTACATGTAAAGGCGTTACTGTCACTTTGGACAACAATAATATGTGGAATGAATTTTACAGATGCAAAACTGAAATGATACTCACTAAGCAAGGTCGTAGGATGTTCCCTTGTTGCCGTTTCCGCATCTCTGGGTTGGAGCCTTTTCAGAACTACACATTAGTAATGGATATGCATCCAGTCGACAACCACCGTTACAAGTGGAGTGACAGACGATGGGAAACAAATGGAAAAGGAGATCCACATATTGCACGCTCTTTTGTACACCCTGAGTCACCTGCAACTGGCCTTGATTGGATGCAAAATCCTGTTTCTTTCTATAAACTGAAGCTCACCAACAACCCTTTGGACCAAGAGAACCAtattgtaataaactctatGCACCGGTACCTTCCTCGTCTTCACATTATACCTGCAGATAAAACAACGGATGGCATTCAGTTGGATGGGCCAGATATTATAACTTTTAGTTTTCCTCAGACAGAGTTCTTTGCTGTCACCGCTTACCAGAATCTGTCCATCACCCAACTAAAAATCGATTACAATCCTTTTGCGAAAGGTTTCAGAGAAGATTCTAACAACTCCCGATCCAGCAAGCCGAAAATTGGACTTCCCACAGAAACAGTGGAGAGTGAGGTGAAACCCAGTCGAGAGACTACAACCCTGAACAATCTCAAGACCTTGTTTGCCAAGAGGAATGCTGCTGAAAAAGCCCTCAAAGTACAACCTCTGCCTGTCCCTGCTGAGGACCTTAAAGCTGTTAGTGCTGATCCTCCCACAATGCCTGAACCTAAGAGTGCTAGTAAGAAGCGTCCTTTGGCAGAGGGACTGTCCGAGTTGATTAAGGGAGCTCATGTGAAGGTCAAAAGGATATCTCTTGAGAAAATCCATGATGGCAGTGACCAGCAGACAAACACTATTGTTCTGCCTGgagcagagaagaagaaggatTCTGCTGCTGATTGTGGTGAAAAAGAAAACCTTCCAATCACAACTGCTGACAAAGTAATGGAGGACAAGAAGAAGCTGAAAAATGACTGTGGAATCCCTGATGTGAAAAGTGTCACTGTAGCGGAAGGGCAGATGAATATCAACGCGGTGTCCAGTTTAAAAGTTGCAGACTTGGCCACAATGAAAAGTACAGCAGAGTTGTCCTGTTCAAAATCAACCGCACAAATGAACGCTCCTGTAAAAAAATCAGATGCACCTATAAATGACAAGGTGGACACAGGGCTAAGTGAAACTGTGGAAAAAACAGAATGTAAAGAGACTTTGCAGACTAGTGGGAAATCTCTTGATGGTGGAGGTGAAGTAAAGAAGAAGCGTGCTGAGCCTGTGCCTTTACCTCTTCTTGCACTTTTTCTACAGCAGTTGAAGTCAAAAACAAGACCTGTCAGATCGaaatcaaaatgtgaaacttctGCTTCAGAATCTGAACAATTGCGTAAAATCCCTTCCGATGCTGAAATCACTTCATCTCCTGCGGCATCCTTAACCACCACACAATCAAATACACAACCTGCAGCCCCCACGACTTCTGAAACTTCATCCATCTTAACGTGTCCTGTAGCTAACTCCGGAGTGTCTGCATGCTCATCTTTATCGCCAACTACAGCCTTCTTTACCTCACTGACTACATCCCCCACAATACCAGACATGCCTACATCTTTAAGCCCTGCTTCTTTAGTTGTCACAGACCCAGAACAAGACCAAGGTCCTGACTCTGATCTGGAGCATAAAGAAAGCCCAACGCTAAGTTCTGAAAGTAATATTGCTACTGTCCCCACATCAAATATTACCTCTGATACTGTGCTTGATTATAAGCAAGAGGATGCATCTGTAATTTTGTCTTCCTTGTCTGATAATACTGTACCCGAACGCACTCTTTCAAGCACTACTCTTGACACAGATGCTGTCTCATCTGATGTTCCCTGTCCCCTTTCTCCAGCCTGTTCTCCTCCTGAAATTATTCCTGTTTCTCTATTCCATAGTCTACAGAATGATGATGTTTGTAATAATGTCAGTACCTCTGTGTCCACTGCTGAGCATACCTTGGACTCCTGTACTCTCCCATCTGCTGAATTTGTTCCTGAGGCTCCTAATCAGTCCCCTATGTCAGAAGACAATGATGTTGATCTTGCATTCTCACCATCTTCTCCAACATTTTCTATCCCAAGCCCAGCTCCTTCCTCACCTGACCCATTTCCACCTGGTCTGTTTATTGATAGGCCAATACCTCCTCGAAAATCACTCGATCCATTTCCACCATGTCTTAATAGACCAAGACCACATGTGGACATAATGAATGCAGTACCATCAAGCTTTTCTGTTGCCAAACCAGGATGTCCTGGAGACTTAGATTTACGCTTTACAACCGGTGTTACTACTGAGCTGCCTTCCCCTATGCCTTGTTCTGAACCATGGGTTTCAAAGGATGCCAAACAGCCTCAACAGCCTGTTCATGAAAGTGTGAGCAAGAAGCCCAAGGTGAAAAATAGGAAAGGTGGAAAATTAAAGCTGAGTGATGATGCGGTGACCGGAGGGACCATACCTGTCCCCATGCAGCCAAGTCTTGAGGACGTGGAAGGCCAGTTATTTGTTTCTTTCGTGTCAAAGAAAGCTCTTGAAATTCACCTTGGGGATGAAGCTAAAGAAGACGCTACAgagaaaacagcagaacatgTGGATGtgaatgaaaataatgaaaaacatcaAAGTATTGAAGAACGAATTGATGAACTTGAAAAGATTCTTCTACGTGACTTAAAAGAGGTGAAGCATCGTCAAGTCATCCACCCCGTACTGCAAGCAGTTGGCCTGAAATTGAACCTGTTGGATCTTGCTCTGGCCATTGATCTGCAGTATCTAGGTGTGTTGCCTATTCCTCCCCCTGTTGTCGTACCTGGGGAAAGCTCAGGGAGTTTGGCCTCATCACAGCTTCCATTTGTTTCTAGAACAGGAAAAACAACTGACTTCACTAAAATCAAAGGCTGGAGAGACAAGTTTTCAACATCAAGTTCTTCATCCGTTCCTGGAGGTACCAGCTCAGAGACGGGGCAGAAAAATCTTTCTGCCTTCTGCAGTGACATGCTCGACGAGTATCTGGAAAGTGAAGGCAAGCTTATTGATGAACGCGTTGCCAGCCTCTCCCAAGCTGTTGTTCCACCAGTGGCCTATGAACTTCCCACCAAAAGCACAAGCTATGTTCGTACTCTGgacagtgtgttaaaaaaacaggcAACTCCATCCACAGCCACCACCGTCAAGCCTTTTGTACCATCTAGAAAATCGCCACTGACTGCTAAAGGCAAAGAGCTTGGCAAGTCAGGGGAAGCTGCTTCAAAACAATCCTTTAGATCCAGTGCAGCAAAAACAGCCTCCAGCCCTTCTTTTTCCAAAAGGTTTACCAAGCCTGGTACTTCAACACCTGTATCCCCGGATAAATCACCTCTGTTTAGTCTATCTCCAAGCAAAAAATCTAGAATTACTAAAATTAAGACCAGGAAAGGATCCAAAACTTCACCTCCATCTGCCCGACTTGAGGGAAGAGCTGCATTGAATAGTGTATCAGTGCCTGCCGAGGCCCAAGATTCCACTTCTGGTAGCCCTGGTTCTGTAGCAGGGGGGCGTTTCCCCAAGTCTGTGGCTAAACTACTGGATGTGGAAGATGGTGCAGTCTGGGAGGGGAAACGGCGTACCTACATCACTGAGGAACGGGCAGCCATTGCGCTATCATCTCTCGTCACAACAGAGGGTAAAATTAAAGGGAACTTGTCTACCATCATTAAGAGGCGTGCTCCCCCTTGCCTGAATTCCTTTTGCAGGTTGGGGTGCGTTTGTGCTAGTCTGGCTCAGGAAAGGCGTCAGCACCACTGTGGCAAACCACAGTGTATGCTGGGCTGTGACTGCCTTCGGCGTAAAGTAGTCCTATTAAGAAAACCATATAGGACTGAGAATACAAATGAAGGAGCTTTATCTGTATATGAACCAGATGAAAAGGAAGCTGAAATgatgagaaaaaagaagaagaagaaagcatATAtTATGTCTGGTCCTGAAGAAGCCCCTGAGCCAGCCACACGTGTGAAAAGATTATGGGATGATGTGAAAAGTGACCCTGATCTAGAGTGTCTCTTCACTCCAATGCCTGCCAGGCCACACTGTCCTCCAGTCTTATCCCCAGAGTTGCAGAAAGATTTGGACAAATTTCTCCGTTCTCCTCCTAGAAAAACGAAACACGAAGAAGCGCTGAGCCCGATCAGAGGAAGAAAGAGGCGCTTAATGACGTGTGCTCGCGTGAGaccattttgcaggaaaactccAGCCATTGCAGATCACCAGAGCACAAAACAGAGTGATCCACATCCTGTTGCAGAGGACTCAGTAGAGGAGATGGAAGAAGGAGAACTTAGACCACCTGCTCTGTTTGGTCCTACGAAACGACTAGAAATTGTGTCTCAGTGCAAATGGTCAACAGAAGGCAGCAGGAATGTTGTTCTTCGTGTGGTGTGTGAGCGTATGGCTCAGGATCGCTTAAAGGACCCGTTCTGGGTTGGAAAGTACCAAATTAAGCCTATCTCCATGACTGTCAATGAGACAGAAGAAGGATCCACAATCACTTACAAAATTTCCATCTCTCAGCCCAGTCCTTTAAACAACACCCAGAAGAAGAATGAGGAGAATGAGAAGATGAAGCGGCTGGAAGCACAACTTATTCAGACCATTGGGAAGAGTGAAGTGAAGGGGCTCCCTCTTCTTTCTCATGTTACTCCGGCAGGTTTACTGAAAGCTGAGAAAAAGCCTCCTGGTGCTTCAGGGCAGATAACGGTCAATGGAAAACCATATCCTCAAGCCAAGCTAGAATTGGGCCAGATGGGAGCATTGCACCCAGCCAACAGACTTGCTGCTTACATTACAGGGAGGGTGTGCGTGGCAAACCAAAATGCCTCCAAAGCTGTTACCCCAGCAACCATTTTGACAACTTCTGCTACCTcccctactactactattactactactaccaccaccaccacttccACCAGTTCTTTAGACACAACAAGTTCTCTTTCAGGCACACCTTCTTCAGCTGTCATATCAGTCAATCCAACAGTGACCAAGCCCTCAGTGGGAACGGTTTTCACCCAAGTTGTGATCAACCATgtgaacaaacaacaaaaactgcACAACACTAGCGTGCCTCTGTCTTTGAGTACAGTTAAACATATTATCAAACCCTCTTCTTCTTCAATGACTGGGGTCACAGGGGTCCCAGTGTCTTCTAACATGCCTCCAAATGCAAGCGTTTCTTTTCAAGCACCTGCTGCATCTGGTCTCACAGATGGTGCTGCATCAGGGAAGAAGACTGTTGTGATCACTGCTGGACCTTCAAATACAGTGACCCCTGGTGGTGGAGTCAGGTTGATGCAGCCTGTAACGTCTAGTCAACCGTCGGCCCCAGGACAGAAGATGGTATTTCAAATGTATAAAACAGCAAATGGGAGCACACTCTACCGCAACCCCAGTGGTCAGCTCATCCAGCTGGTCCCTCTCAACCAGTTTAGGGCCCTCAATCCAAATGTTATGCTATCCAAGCAGAcCACCATTGTACGATTTCCTTCTGCTACCGCGACGAAGCCTCAGAATAACAGTTCTTCCACTGTCACGACATCCACGCCCGCCACGTCTTCTACACCTCTAAAAGCTCAAAATCCAACCCCAGTACACAGTACCTCAACAGTTGTACACAATTCTACAACAGCCAATATGACTAAAATCATTACTGCTTCTTCTGTGGGCCAAAAAACAGCTACGTCTCTCTCTGGTGCCAATTCAGACCAacacagtacagtgagtatagTCCCAGGAATCCTTGGCAACCCTGGCATTGGCATAATTAAAGTTGTCCCGCAGGCTATTATCAAAGATCCAAAAAATCCCAAAATTACAGTGACCACTTCATCACCATCGGCGCAAAGCACTTCAAATGTTGGCCCTAAAAATGGaggctttattttattaagttccTTAGCCCAACAGAATCAAGGCAGTCTGGAAATAAAAGATGTCAGCGGTGTCCACACTTCCCCTGCTCCAGCTGGAGGATCACAACAGAATAATCAGTCCTTCAATAGCTCAGAAAAGCCTGCTGAGAGTGTGGTTCTTGAAGACCACTGCTACACCTTTGAGGCAAAGAAGACTAGCATCTTCTCTGACAAGCCTGCAAATGTACCTAAAGAAGGTACAAATTCTGCAGAAGCCTGCTTTCAAAGTATGATCCCTGAAGATGTCCTGGATTTTGCTCCTATTGAGGATGATGATGGATCTGACTTGGATGCAGTTTTAGACCCTGAGACGGTTGCTAAGTCTAATGCTGAATTAGACCTGGAAGACAGTGATTCAGAGTTAACTGAAGACTCAGACATGTATGATGACTCCAACTCCAATAACACCAGTGACCAGGAGAATCTCTTTATTGACACGGATTCTGATGGGGGAgagaagaaggaaagaaggagcaAACGAAAATCTGTGACCTCATACATGCATGATTTTAATGAGATGGAGGACAATGATCTGGTTGATATTGAAACCTATGAGGAGAACTCTGAAACCAGTGAACAAAGAGCACAAAGGGAACGTAAGATGTATTTGCGTAGGAAGCAGAGGGTGGAACAGGAAATGGAGAGACGTAGCTGTCTTAGAGAGTGCTTTCAAAAGTTGCACATGTCTTTGAGTAATGTTGACAGCAAATCCAGCAGAATGACACTACTTAAACTGgcCTGGAAAGAAATCCAAACTCTTTCTAAAGAAGCAGAGGAGCTGGTAAAAGTGAAGAAAGAGCTAAAGAAGAAGAGGGCATACTATCTTAAAATGGCATCTCAGTTTTCTGGAAAGTCTAAGGAATCCATCTCTCAAAAGCTGAGCGAAATTATTGCTAAACAAAAAGCCCTGGAGAACCAAGAAAAGGCAAAGGCTACAACACAACCAGACCCAAAGCCCACACTGACTGATGAACAGAAAAGGCTGGGGATCAAGAACAAAATGAAAGATACATTGCATAGACATGTTCAGCTTTCCCCCAACTCCAGGCCAATGGACCTTAGGACCTCCAGACAAAAAAGGCTTGGGTCCCAAGATGTAGAACATTTGGGAGCAAGGCAGAATGTGTCTGTGGCCCagaagaaagggaaaaagacCATTTTCAGACCTATTCAGCCAGCCAAAACTCTTAACCCCGACACAACTTCTCAACCCACACCACGTGAGAGAACGAGACCCAACATCCTGTCCCGTAGCAAGTCTCAATCCCTGCCCGTTTCTCCATCTAAAAATCAAGTGTTTGTGCCTCAAGTAATGGTGGAAACATTGCCATGCAATCAGATCATAACTATAAGTAATCCTCTTCAGCCCATTGGCATCACTTCTTTAGGCAAAAGGCAATCAGCCACACCAGGGGTTGCAGCTGTGTCTATATCTGTTCCTGCTATTTCTCACCCAATAAAAGTGGAGAATCCAATTCCTGTTTTGCAGCCTCAGGACATTGGTCTTTCCAACAGCCCTGTGAAAATCAGCAGTCCAGGTAAAACTGAAATCTTTCCCAAGATTTCCAATGTGGTTTCTTTGGTGCCACCAGAGAAGCTGGTTGTGACCCCATCAGTTGTAATAGAGAAGACAGTCCCACTTGTTGAGACACATGCAGCCTTAAACCCTGTGTGTGTGGAAGCTCAGGAGAACACTCTCTTAGAATCTACTAAAGGAGCCTCTGCTGTGGAGGAACAAGGTCTGGACAAACAGACGTTAGAGGTTTTGCCTAAGAGGCCTGAACAGGGTACTACGGTCATCCAAACGGATGCTTCAGCCAGACAGAAGGAAGAGAGGAAGGACGGTGCTAGCAGTGAGGCAGAAGTTGAAAATCTGATGTCTTTGCTTGACGAGCTGGAATTCCTCAATCAGCAGCTTAATAGTGAACCCTCTCAGCCACAGACAGGAGATTTAAGTAATACAAAGGCCAGCAATCTGCCAACTAATGTGTTCATTGAGAAGGAGGCAGGTGTAGACCGAGATGATGAACGTTCCCTCAGCCCCTTGTTCCTCAGATTAGATGAGGATTTAATGTCATCAACCCCTTCAAAGGATGAGCTGGATGATATTCCTCCGAAGGTGGATGACCTTGTCAAAGTTATATTTGGGTCAGACTCTCCTCCAAATTCATCAGAGTCTGAGGTCACTGCAGGGGTTAATGATGACAGCAGCCATGGCCCAGCATGCCGTGTTAAAAGCGACGCTCCATCTCTACCCCCTTTGCTACAGATGAAAGCAGGAGGAGGAACAACAACAGACACTTTGAAAGAGCAGGCTGGCGTGTCATGGCGGCCCATGCCCAAGCTTGCACCTTTGGGGCTAAAGCCTCAGGAGAGTACACAGCATAAGACAGTTAGTGCTCATGGCACCAAACCTGGCTCACAGCTGCCTAGTCTACGCAGTGCACATATGTAATGCCTGGACAATCAGGGATATTGGCTGTTTTCATCTATTTGGGTGCATGTACAGGGTATAAGATAGATACATACGATgtctgttatttatttgtttcagaGTACATTTCTTCATGCTCTGCATCAGCAAGGCATAATTTGTTTAGCCTTTGGTAAATCCAAAGATATTTTCATCTGTTATTTTCCAACAGAGCAGAGAGGAATATGTTTGTATTCTGAGATTTTGAGCAGTAGGAAAACCTGTTACTACTTCTATGTTCTTCCTCTTATTTTTGAAGAGGTGTCTGTAAATAATAAACGAAATCTGAAACTAA

Function

GO: NA

KEGG:

id description
K23399 MGA; MAX gene-associated protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251893.3 True 9496 mRNA 0.46 26 23475259 23498557

Neighbor

gene id symbol gene type direction distance location
tyro3 tyro3,LOC107693181,LOC107729301,LOC107586589,LOC107689305,LOC107589665 coding upstream 2173 23454001 ~ 23473086 (+)
foxa1 foxa1,LOC106611236 coding upstream 106624 23365431 ~ 23368635 (+)
clec14a NA coding upstream 162893 23309045 ~ 23312366 (+)
sec23a sec23a,LOC107689296,LOC107589610 coding upstream 207397 23250660 ~ 23267862 (+)
srp54 srp54,LOC107729255,LOC107693187,LOC107733904 coding upstream 226410 23242171 ~ 23248849 (+)
LOC103030470 mapkbp1 coding downstream 7099 23505656 ~ 23549535 (+)
LOC103031726 tbpl2,LOC107729258,LOC107586674,LOC107693101 coding downstream 60495 23559052 ~ 23563050 (+)
atg14 atg14,zgc:113944,LOC106602264,LOC106611244 coding downstream 65569 23564126 ~ 23570689 (+)
LOC103037620 ctbp2a,LOC103037620,LOC108428680,LOC107692786,LOC107589601,LOC107729277,LOC107665110 coding downstream 441353 23939910 ~ 24009312 (+)
LOC103037301 LOC108428614,LOC108269476 coding downstream 513996 24012553 ~ 24019511 (+)
G82748 NA non-coding upstream 1804 23473204 ~ 23473455 (+)
G82606 NA non-coding upstream 248349 23225765 ~ 23226910 (+)
G82596 NA non-coding upstream 266460 23208495 ~ 23208799 (+)
G82588 NA non-coding upstream 269815 23204815 ~ 23205444 (+)
G82579 eapp,LOC107733856,LOC107729290 non-coding upstream 280969 23127953 ~ 23194290 (+)
G82754 NA non-coding downstream 162 23498719 ~ 23499013 (+)
G82753 NA non-coding downstream 479 23499036 ~ 23552919 (+)
G82763 NA non-coding downstream 82591 23581148 ~ 23581751 (+)
G82766 NA non-coding downstream 91943 23590500 ~ 23590893 (+)
G82768 NA non-coding downstream 97655 23596212 ~ 23596474 (+)
G82609 baz1a other upstream 243941 23230430 ~ 23231318 (+)
G82488 NA other upstream 1117124 22357644 ~ 22358135 (+)
ralgapa2 ralgapa2,LOC107687934 other upstream 1801821 21520907 ~ 21673438 (+)
G81763 NA other upstream 3801621 19673127 ~ 19673638 (+)
G81761 NA other upstream 3809212 19665736 ~ 19666047 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other downstream 376882 23875439 ~ 23877770 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 411125 23909682 ~ 23973975 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other downstream 640832 24139389 ~ 24142232 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 1397337 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 1435607 24934164 ~ 24936186 (+)

Expression


Co-expression Network