atg14 (atg14,zgc:113944,LOC106602264,LOC106611244)


Basic Information

Item Value
gene id atg14
gene name atg14,zgc:113944,LOC106602264,LOC106611244
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 23564126 ~ 23570689 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251903.3
ggtagcacaactcgacagaacaccggccaAACAGCACCATCACAGGCAGGCAGGCGGgctgtgagagagaggaggcggAGGGGGCTTTTTTACCCGATCAACACAACATTTAGCTAACTGGTACTGTCTAAAATGTTTCCAGAGCTAGTTATATCCCAGCAGGAACAGTAACAGTAGGTACTCACTGACAGACAGCGCTGCGTTATGGCCTGTCCCCCGGAAAGTGAAGTCCGAGCTGTGGGCTCCAGTGAACCTGCCGCCGCCGGGAGAGGGTCGGGGGCCCGGGCTCCTATCCGACAGTCTCCCGCAGTCCTCGCAGCCTCCCCGGGGTCCGTGATGGTGGAGTCCGTGGACGACGCGGAGGGACTGTATGTTGCGGTGGAGAGATGTCCGCTTTGTAACACGGCGAGACGCAGGCTGACCTGTGCTCGCTGCATCCAGGCGGGAGATTTCGTTTATTTCGACGGGAGAAACCCGGAGAGatacacagaaaaattggaaaaacttaagaagatgaaaaatgaaaaggaaaatcTTCAGCAAAGAGTCACCACAGCTATGGACAAGAAGGTCCAGGCAGACCAACTGAAGTGGAAAATCATGTCCTGCAAGATGAAAATTGAGCAGCTGAAGGAGGCGATCTGCAGTGGGAATGAAGAAGTAAGAGGCGgcaAAGATCTGTTGCTGCGCTCGCAGGAAGAAGGCCAGAGGCTGCAGCGGCGGGCCTTTCGGCACCAGGAAAAGAGGGACAAGATAGAGCGACATAATCGTCGCCTGAGTGAGCTGCtagataaaaggataaaagaacTGCAGGGCCGATTAGAGGCTCTGGCTGAGGTGCGGAAGGGTCACATCCTGGAACTCACCACCCACATCTTCCCCACACAGGAGGAGAAGCAGGGCAGCAGGGACCCAGCTGATCCTGCTGTGGCCGAGTATGACTTTGCCCTCACGTCCAGCACTGTGAGTGAGTTAGCTGAGGCCCGACGAACGACTTACATGTCTGGACGCTGGATTTGGGATGACCAGAATGGAGAGACGAGCATCAGTATCACTGGACCTCATGTCACTTTGCCCAGCAATGGAGACTGTTCTGCCTACTACAACTGGGTAGAGGAGAAAAGCACTAATCCAGGTCCAGagctgGATTATATCAATCCAGCACACACCATTAGTGCAGCTCTCTGCTATGCTACCCAGCTTGTTAACATCCTCTCTCATATTCTGGATGTCAATCTGCCTAAAAAGTTGTGCAACAGTGAATTCTGTGGTGACAGTTTGACCCGTTACAGATTTACTCGTGCTGTCAACAAGCTTAACACCAACATCTTGCATCTCTGTTTCTCCCAGCATGTGGACAGTGAGCTGCTTCATCCCCATCACACTCTGAGGAACATCATGTTTCTGGTCTCTCCTGATAACAAGAATCTTGGAAGGACTGGGCCCTTTGAGGTGAGTGCAGACCTGGAAGACTCGATGGAGTTTGTGGAGCCGGAGGCAGCAGGTCCTGCAGAGGAGAGTGGAGATGAGGCAGTGACTGATGAAGAGACCGACTTGGGTACAGACTGGGAAACGGTGCCCAGCCCTCGCTTCTGTGATATCCCTTCTCAGCCCATGGATCTGTCTCAGAGTACAGCCATGCAGGCCTCCCAGCCAGTAGGCAATGCTGGAGGCATGATCTCGTCTGCTGCTGCCTCAGTGACCTCCTGGTTCCGTGCCTACACTGGTCAGCGCTGAGAACACGCTATGCAAACGGGCAATGCGTTCCTCCCTCTTTTATCAGCTCTCATTAGGAAAAAGGGATGTTTTCTGTCACATGACTGCATGTAGAAAACAAATGTGTGTTGACAGTGAGGGGGAAGGGTGCCATTTCCAAAAACAACTAGTTCTGATACGAAGGGCAAAGCAAGGcatctgctgacttgctgaGATTTGTGACCTTTTGTAGCTCACCAACACTGTAGAGTTTCCCCCTCATGATCCACAGTCAAGCATCGATCTTCTCTTCTTTAAAGCTTAATTGTTTGAGGAGATTGTCCTCAGCAGGGCAGGAAAATAATACACTAAACATGTTACAATTTGGTTGACTGGCCAAAGTCACACACAGTTTGCTGGCTGAGCTCACCATGGCCATGTCTGTGCACCTCTGAACTGTTGGGTGTGAGATTGCTGTTATGAGGTTGTCCTGGTGGTGGCTCAGTGTGTCCAGGTATTTTAGCAGAATTTTGCAGAAATACTTTATGTAAGGCATTGTGTTTGCCAGACTCACCTCTGGCAGAATGATTGTGATGGCAGGCTTCAGCTTGTCAGAATTTAGCTAAAAATGCACCTTTTCACCAGCTATTCAAAGACCCATACTGTATTAACACTGCAGTAGAGTCTGGGAATGAATTATTGccatgggtgtgtgtttgtatcttattttattacatatatataaggcattttacttaaagaaagaaataatagtTGGGTGCTCATTTTATGTTATCTTAGCAATCTTGACTTTGTTTCAACTGCTACTTTGGGCTCTGTTAAGAGTAAACTTGAAAACctgaaatattgattaaaaaggACACTTCAGACTTTACAGTA

Function

symbol description
atg14 Predicted to be involved in cellular response to starvation; macroautophagy; and positive regulation of phosphatidylinositol 3-kinase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of phosphatidylinositol 3-kinase complex, class III. Predicted to be active in autophagosome and mitochondria-associated endoplasmic reticulum membrane. Predicted to be extrinsic component of omegasome membrane and extrinsic component of phagophore assembly site membrane. Orthologous to human ATG14 (autophagy related 14).

NR:

description
beclin 1-associated autophagy-related key regulator-like

GO:

id name namespace
GO:0010508 positive regulation of autophagy biological_process

KEGG:

id description
K17889 ATG14L, ATG14; beclin 1-associated autophagy-related key regulator

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251903.3 True 2595 mRNA 0.49 10 23564126 23570689

Neighbor

gene id symbol gene type direction distance location
LOC103031726 tbpl2,LOC107729258,LOC107586674,LOC107693101 coding upstream 1076 23559052 ~ 23563050 (+)
LOC103030470 mapkbp1 coding upstream 14591 23505656 ~ 23549535 (+)
LOC103028567 NA coding upstream 65569 23475259 ~ 23498557 (+)
tyro3 tyro3,LOC107693181,LOC107729301,LOC107586589,LOC107689305,LOC107589665 coding upstream 91040 23454001 ~ 23473086 (+)
foxa1 foxa1,LOC106611236 coding upstream 195491 23365431 ~ 23368635 (+)
LOC103037620 ctbp2a,LOC103037620,LOC108428680,LOC107692786,LOC107589601,LOC107729277,LOC107665110 coding downstream 369221 23939910 ~ 24009312 (+)
LOC103037301 LOC108428614,LOC108269476 coding downstream 441864 24012553 ~ 24019511 (+)
fzd3 LOC108428681,LOC107729283,LOC108270052,LOC107665105,LOC107589599 coding downstream 452853 24023542 ~ 24046622 (+)
LOC103044752 LOC108428615 coding downstream 534523 24105212 ~ 24110198 (+)
ahi1 ahi1 coding downstream 542447 24113136 ~ 24125115 (+)
G82753 NA non-coding upstream 11207 23499036 ~ 23552919 (+)
G82754 NA non-coding upstream 65113 23498719 ~ 23499013 (+)
G82748 NA non-coding upstream 90671 23473204 ~ 23473455 (+)
G82606 NA non-coding upstream 337216 23225765 ~ 23226910 (+)
G82596 NA non-coding upstream 355327 23208495 ~ 23208799 (+)
G82763 NA non-coding downstream 10459 23581148 ~ 23581751 (+)
G82766 NA non-coding downstream 19811 23590500 ~ 23590893 (+)
G82768 NA non-coding downstream 25523 23596212 ~ 23596474 (+)
G82785 kiaa0586 non-coding downstream 198836 23769525 ~ 23772117 (+)
G82813 NA non-coding downstream 334171 23904860 ~ 23905395 (+)
G82609 baz1a other upstream 332808 23230430 ~ 23231318 (+)
G82488 NA other upstream 1205991 22357644 ~ 22358135 (+)
ralgapa2 ralgapa2,LOC107687934 other upstream 1890688 21520907 ~ 21673438 (+)
G81763 NA other upstream 3890488 19673127 ~ 19673638 (+)
G81761 NA other upstream 3898079 19665736 ~ 19666047 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other downstream 304750 23875439 ~ 23877770 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 338993 23909682 ~ 23973975 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other downstream 568700 24139389 ~ 24142232 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 1325205 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 1363475 24934164 ~ 24936186 (+)

Expression


Co-expression Network