rmnd1 (rmnd1,LOC107586664,LOC107692687)


Basic Information

Item Value
gene id rmnd1
gene name rmnd1,LOC107586664,LOC107692687
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24264445 ~ 24269866 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251957.3
GACCTGAAACGTAGTGCGTGATGTCACGAACACAAGAAGCACACATGCCGACACTGTGCAGCGCACTGTGGAGATACACTGTATCTGAGCTGTCCTGCAATTAAACATGTGTGTTTAGAAACGAGTGAGCTGGTAGATCCAGCTATGGTCCTCCGCTGGTGTGTCTTCAGCAGGAGCTGTGTTGgtagCTAGCCAGATATGCTAGCCAGGACTTGTTCAGCATTGTGgagactgcagcagcagcagcccttGGAGAGAATACATTTCTCCAGGTTGTTTCCAGCACTAGCAGGACGGAGAGAAAATGGGCTTTGCTCCAGGGTCAAATGCTTTACACCCAACCTCTTGACACAGAGTCTGTCTTCACATAGTCTTTATACAGACCAGAAGAAGCAGGATGCTCACACCAGCTCTTCCCATCTTTGGTGGTCTTCAGGACTTCAAAGAGGAGCACATAAAGGACCTCACATGGTTTACACAGAATCACTTGTCTTAGATATGATGATGCCCAAAGCATGGCGTATGCACACAAGACTAAAGTCCACCACGACAGCTACTAAATCTGTGCTGCTGCAGGGAGGCGTACCTGGCAAAAGAACATTAAAGGGACCAAGGACAAAGCAGCCATCAAGAGCCAACCTGCCTGCCCCAGAAGAGGATATGATGCAGTGTATTGCCTATGCAACTGCGGACCAGTACCACCTACCAACTCTCTGTCATGATCTGATAGCCAATGGCTTTTTTGAAATTAGAGACCTTCCCAGAGATGCCTCAAATGTCTTGGTGATTGGAGCAGAGTCAGTGTCAAAACCAGATGACACTGCTATGATATTTTTCTTCAGAGAAGGTTCAGTGGTTTTCTGGAATGTCACAGAGAAAGATGTAAAGAAAGTAATGAGAATATTGGAGCAACATGAGATTCAGCCGTATGAAGTGGCCTTGGTTCACTGGGAAAATGAAGAGATTAATTATACAGTAGGAGAGGGAAATTCGAAGCTGTACAGAGGAAACTTCATATTCAATGCTGAGATGGACTACGAACAACAGATTCTGGAGAAATTTGCATTTTCCAATGCCTTGTCTCTGTCAGTTAAGCTGGCAATATGGGAGATCTCTCTGGATAACTTTGTTGAATCTATTCAGTCAATTCCTGAGACACTGAAAtctggaaaaacagtaaaactctCCAGGGCAGAGGTGTTGCAGAAAATAGGTGAACTCTTTGCACTAAGGTACTGCATAAACCTCAGTTCTGATCTACTTATCACACCTGACTTTTACTGGGACAGAGAAGACCTGGAGCAGCTGTATGACAAAACCTGTCAGTTTCTCAATATCAACCGTAGGGTCAAGGTTGTGAACGAGAAGCTGCAACACTGCACTGAACTGACAGACCTCATGAGAAACCACCTCGGTGAAAAGCACAGTCTTCGACTGGAGTGGATGATCGTAATCCTCATTACTATTGAGGTAATGTTTGAACTGGCCCGGGTGATCTTCTAAAGAGATTATAGAAGATACAGGAGCTATGGCAAAAGATTATCCCTGTCTGAAACCAGCaagaacacaaaatcttctccaaaagaaatgatttaatttacGCTTAGTGTTTAGTGATatgctgtagtttttttttgtttttttttaaatctcagtatTTTCAATAGTTCATGCCATGTacttacaaattaattaaatgctgttttttgtctGATAGAAATGTATAGTGCTTGTTGTCTTTATAAGATAAACAATTTATGTGAATCTTGAAAAATTGTCATTTGTATGCAGTGAAAGAAAAAACCACATTGAGGatattaaatagctaaatgttcAAAAAAA
>XM_022672985.1
TGTTAGTGTTACTCAGCTCTTCGTTTCTAAGCAACATGTCGACAACCGAGTTCACCGATAGGTGGCACCAGAGGGGCACCCCCGAgtagCTAGCCAGATATGCTAGCCAGGACTTGTTCAGCATTGTGgagactgcagcagcagcagcccttGGAGAGAATACATTTCTCCAGGTTGTTTCCAGCACTAGCAGGACGGAGAGAAAATGGGCTTTGCTCCAGGGTCAAATGCTTTACACCCAACCTCTTGACACAGAGTCTGTCTTCACATAGTCTTTATACAGACCAGAAGAAGCAGGATGCTCACACCAGCTCTTCCCATCTTTGGTGGTCTTCAGGACTTCAAAGAGGAGCACATAAAGGACCTCACATGGTTTACACAGAATCACTTGTCTTAGATATGATGATGCCCAAAGCATGGCGTATGCACACAAGACTAAAGTCCACCACGACAGCTACTAAATCTGTGCTGCTGCAGGGAGGCGTACCTGGCAAAAGAACATTAAAGGGACCAAGGACAAAGCAGCCATCAAGAGCCAACCTGCCTGCCCCAGAAGAGGATATGATGCAGTGTATTGCCTATGCAACTGCGGACCAGTACCACCTACCAACTCTCTGTCATGATCTGATAGCCAATGGCTTTTTTGAAATTAGAGACCTTCCCAGAGATGCCTCAAATGTCTTGGTGATTGGAGCAGAGTCAGTGTCAAAACCAGATGACACTGCTATGATATTTTTCTTCAGAGAAGGTTCAGTGGTTTTCTGGAATGTCACAGAGAAAGATGTAAAGAAAGTAATGAGAATATTGGAGCAACATGAGATTCAGCCGTATGAAGTGGCCTTGGTTCACTGGGAAAATGAAGAGATTAATTATACAGTAGGAGAGGGAAATTCGAAGCTGTACAGAGGAAACTTCATATTCAATGCTGAGATGGACTACGAACAACAGATTCTGGAGAAATTTGCATTTTCCAATGCCTTGTCTCTGTCAGTTAAGCTGGCAATATGGGAGATCTCTCTGGATAACTTTGTTGAATCTATTCAGTCAATTCCTGAGACACTGAAAtctggaaaaacagtaaaactctCCAGGGCAGAGGTGTTGCAGAAAATAGGTGAACTCTTTGCACTAAGGTACTGCATAAACCTCAGTTCTGATCTACTTATCACACCTGACTTTTACTGGGACAGAGAAGACCTGGAGCAGCTGTATGACAAAACCTGTCAGTTTCTCAATATCAACCGTAGGGTCAAGGTTGTGAACGAGAAGCTGCAACACTGCACTGAACTGACAGACCTCATGAGAAACCACCTCGGTGAAAAGCACAGTCTTCGACTGGAGTGGATGATCGTAATCCTCATTACTATTGAGGTAATGTTTGAACTGGCCCGGGTGATCTTCTAAAGAGATTATAGAAGATACAGGAGCTATGGCAAAAGATTATCCCTGTCTGAAACCAGCaagaacacaaaatcttctccaaaagaaatgatttaatttacGCTTAGTGTTTAGTGATatgctgtagtttttttttgtttttttttaaatctcagtatTTTCAATAGTTCATGCCATGTacttacaaattaattaaatgctgttttttgtctGATAGAAATGTATAGTGCTTGTTGTCTTTATAAGATAAACAATTTATGTGAATCTTGAAAAATTGTCATTTGTATGCAGTGAAAGAAAAAACCACATTGAGGatattaaatagctaaatgttcAAAAAAA

Function

symbol description
rmnd1 Predicted to be involved in positive regulation of mitochondrial translation. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 11. Orthologous to human RMND1 (required for meiotic nuclear division 1 homolog).

NR:

description
required for meiotic nuclear division protein 1 homolog

GO: NA

KEGG:

id description
K23499 RMND1; required for meiotic nuclear division protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251957.3 True 1842 mRNA 0.42 12 24265734 24269866
XM_022672985.1 False 1743 mRNA 0.42 12 24264445 24269866

Neighbor

gene id symbol gene type direction distance location
syne1 syne1 coding upstream 7195 24167119 ~ 24257250 (+)
ahi1 ahi1 coding upstream 139330 24113136 ~ 24125115 (+)
LOC103044752 LOC108428615 coding upstream 154247 24105212 ~ 24110198 (+)
fzd3 LOC108428681,LOC107729283,LOC108270052,LOC107665105,LOC107589599 coding upstream 217823 24023542 ~ 24046622 (+)
LOC103037301 LOC108428614,LOC108269476 coding upstream 244934 24012553 ~ 24019511 (+)
LOC103045657 LOC103045657,LOC108428691 coding downstream 1476 24271342 ~ 24275108 (+)
stx11 stx11 coding downstream 29305 24299171 ~ 24302766 (+)
trnal-uaa_1 NA coding downstream 36745 24306611 ~ 24306693 (+)
trnal-uaa_2 NA coding downstream 37485 24307351 ~ 24307433 (+)
trnal-uaa_3 NA coding downstream 38942 24308808 ~ 24308890 (+)
G82838 NA non-coding upstream 125541 24136576 ~ 24138904 (+)
G82816 NA non-coding upstream 348986 23913129 ~ 23915459 (+)
G82814 NA non-coding upstream 355837 23908338 ~ 23908608 (+)
G82813 NA non-coding upstream 359050 23904860 ~ 23905395 (+)
G82785 kiaa0586 non-coding upstream 492328 23769525 ~ 23772117 (+)
G83064 NA non-coding downstream 44849 24314715 ~ 24314965 (+)
G83071 NA non-coding downstream 79575 24349441 ~ 24350535 (+)
LOC111193226 NA non-coding downstream 87109 24356975 ~ 24367973 (+)
LOC111193227 NA non-coding downstream 302462 24572328 ~ 24576551 (+)
G83116 NA non-coding downstream 349829 24619695 ~ 24619937 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other upstream 122213 24139389 ~ 24142232 (+)
G82811 psma3,LOC107729246,LOC107725600 other upstream 290470 23909682 ~ 23973975 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other upstream 386675 23875439 ~ 23877770 (+)
G82609 baz1a other upstream 1033127 23230430 ~ 23231318 (+)
G82488 NA other upstream 1906310 22357644 ~ 22358135 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 626028 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 664298 24934164 ~ 24936186 (+)
c9h8orf74 NA other downstream 760131 25029997 ~ 25034121 (+)
supt3h supt3h other downstream 891052 25160918 ~ 25329482 (+)
LOC103033015 LOC108423550,LOC108270308 other downstream 1649691 25919557 ~ 25975283 (+)

Expression


Co-expression Network