LOC103045657 (LOC103045657,LOC108428691)


Basic Information

Item Value
gene id LOC103045657
gene name LOC103045657,LOC108428691
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24271342 ~ 24275108 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251958.3
ggctttggacatttttgttggacctggcaaccctgcgcGGGAGAGTCTCAGCCGTCCACAGGAGCTGCGGTAGTATGAAGACCACCGCGTTTAGTTTAATAAAGGATTCTGAAAGAGAAAGTTGCATAGGTTGAACAATGGAGTTGGCCCACCATGGTCTTGTTCTTCTGCAGCGGCTGAATGCTCAGAGGGAGTATGGTTTCCTATGTGACTGCACAGTGGCTATCGGGGATGTTTATTTCAAAGCACACAAGGCGGTCCTTGCAGCGTTTTCAGACTATTTTCGCATGCTGTTTGTTCACCAGGACAGTGATTGTGTTCGACTGAAGCCTTCGGATATACAACCAGAAATCTTCAGCTATCTGCTTAACCTGATGTACACAGGACAGCTGACCACACAAATGATTGATCCTCAGCACCTGGAGCAGGGAGTGAAATTCCTGCATGCATACCCTCTTTTACAAGAAGCAAGTCTTCTTATTCACCCAGAGTCACAATGTGTTCCTTTGGCAAACTCTTTGTATGGGATTCAGATTTCTGATCAACCATGCGGCTTGCCCAGTAAAACCACAGCTTGCAAAGGTCACGCCTGCCCTGAAAACAGTAATGAAATCTTGTCCCAGAACCTTTCAGAGGTTGCAGAAACAAAAGCCAACACTGTGGATGTCTACAATCAGGAGTCTCCCAGTGAGGTCGCTGCGTCCAGCGCCATCACCATCCAACATATTACATCTGGTATAATGAGAAGAAATGCCTCCTCTAGGAAACGTTACATTTGCAATCACTGCGGGAGTCGCTTCAACCAGAGATATCATTTAAAGGAGCATCTCCTTCTCCATGCCAACCAGACCTTTGAACATCATATGCCATCTGTGGTAGATAGCTGTGCTATGAAACTGGAAGGTCAAGATGGGGAGGATGAGGTCCTGCGTGTTGACAGTGATGATATCAGTGACAATGAGCTACAGATGAGGAGGGACAATACTCCGCCTCCATCAGATATAGCTGATATAGACAACCTGGAAGCCCTGGAGCGTGAGGTAAAGCGACGGAAGTTTGAGTGTCCAACTTGTGGCCGCAAGTTCATCCAGAAGAGCCATTGGCGGGAACACATGTACATCCACACAGGCAAGCCATACAAATGTAGTGGCTGTGGGAAGAATTTTTGCAGAGCTAGCCAAGCGTCCAGACATGTGTGCCTGATTCAGGGTGAAGAGTCATACACAATGGTGAATAAGCAGAGCATGGTTCTGTGTGGTGGAGAAGACAACAGTCAAGTTGAGGCACTTTTTATGTCGTCAAGCAGACAATATAAATGCAGCATATGTGCATTGCCTTTTTGCAGCCCTTCTGAGGTCCTCAAACATCAGTGTCAAACTCAGGTGATGGTCACACCCGTGCAAGACGACCCGTCAGGTGAACATACAAGTGGCAGTTCAGTAACTGATGAACCAGTCCCGAATACAGTGAGCATGTCCACCGAGGAAGTGTAGCAGAAATTAAGCTCTTTTGAGCAATAGATAATGTTGAActgtttgtttagatttttatttttctaaatctattttttcatattttagggccaagaaaatgcaaagaagggcacagctttttaaaactatGCCAATGTGTACGCCagatgttttgtcatatttgaGATCAGAGAATCAGTTGTTCCTGTTGGTTTATACGGATACTGCTcccaaataatttatttatttaagtgataTGTAGAAGAaactaaacatgttt

Function

NR:

description
zinc finger and BTB domain-containing protein 2-like

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251958.3 True 1752 mRNA 0.45 3 24271342 24275108

Neighbor

gene id symbol gene type direction distance location
rmnd1 rmnd1,LOC107586664,LOC107692687 coding upstream 1476 24264445 ~ 24269866 (+)
syne1 syne1 coding upstream 14092 24167119 ~ 24257250 (+)
ahi1 ahi1 coding upstream 146227 24113136 ~ 24125115 (+)
LOC103044752 LOC108428615 coding upstream 161144 24105212 ~ 24110198 (+)
fzd3 LOC108428681,LOC107729283,LOC108270052,LOC107665105,LOC107589599 coding upstream 224720 24023542 ~ 24046622 (+)
stx11 stx11 coding downstream 24063 24299171 ~ 24302766 (+)
trnal-uaa_1 NA coding downstream 31503 24306611 ~ 24306693 (+)
trnal-uaa_2 NA coding downstream 32243 24307351 ~ 24307433 (+)
trnal-uaa_3 NA coding downstream 33700 24308808 ~ 24308890 (+)
trnal-uaa_4 NA coding downstream 35305 24310413 ~ 24310495 (+)
G82838 NA non-coding upstream 132438 24136576 ~ 24138904 (+)
G82816 NA non-coding upstream 355883 23913129 ~ 23915459 (+)
G82814 NA non-coding upstream 362734 23908338 ~ 23908608 (+)
G82813 NA non-coding upstream 365947 23904860 ~ 23905395 (+)
G82785 kiaa0586 non-coding upstream 499225 23769525 ~ 23772117 (+)
G83064 NA non-coding downstream 39607 24314715 ~ 24314965 (+)
G83071 NA non-coding downstream 74333 24349441 ~ 24350535 (+)
LOC111193226 NA non-coding downstream 81867 24356975 ~ 24367973 (+)
LOC111193227 NA non-coding downstream 297220 24572328 ~ 24576551 (+)
G83116 NA non-coding downstream 344587 24619695 ~ 24619937 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other upstream 129110 24139389 ~ 24142232 (+)
G82811 psma3,LOC107729246,LOC107725600 other upstream 297367 23909682 ~ 23973975 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other upstream 393572 23875439 ~ 23877770 (+)
G82609 baz1a other upstream 1040024 23230430 ~ 23231318 (+)
G82488 NA other upstream 1913207 22357644 ~ 22358135 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 620786 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 659056 24934164 ~ 24936186 (+)
c9h8orf74 NA other downstream 754889 25029997 ~ 25034121 (+)
supt3h supt3h other downstream 885810 25160918 ~ 25329482 (+)
LOC103033015 LOC108423550,LOC108270308 other downstream 1644449 25919557 ~ 25975283 (+)

Expression


Co-expression Network