tp53i3 (tp53i3)


Basic Information

Item Value
gene id tp53i3
gene name tp53i3
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24732177 ~ 24736377 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251997.3
CGGCAGCAAATTAATATTACAGGTAAAGCAGAGGCGTTGGTAAACCAAGTCAGGTCCCCGATTTCACAGGGCTGTTTGTAAATCACTAGTGTTTTAACCATGCTTCAGCATACAGATGGAGAAACTTCGATGCTGGCAGTGTGTGTGAAAGAACCAGGTGGTCCAGAGAATCTGTGTGTGGGAGAAGTTCCCAGACCTAAACCTAAAGATGGGGAAGTCCTCATCAAAGTCAATGCAACAGCTTTAAATCGGGCAGACCTGTTACAAAGGAAAGGTATCTACCCAGCTCCTCCTGGTGAGAGTGAGATCCTTGGTCTGGAGGCTGCTGGTGTAATAGCTGGCCTTGGTCCTGGAGTCAAGAAGAATTTTAGCCCAGGAGATAAAGTAATGGCTTTGCTTTCTGGAGGAGGATATGCACAGTATGTTGCTGTGCCTGAGGAACTCCTCATGCCCGTCCCTCCACACATATCCCTTGAGGAAGCTGCAGCAATCCCAGAAGCCTGGCTGACTGCCTACCAGCTTTTACACTTTATAGGCCGAGTTAAGCAAGGAGAGTCTGTGTTGATTCATGCTGGAGCAAGTGGAGTTGGCACTGCTGCCATTCAGCTTGCTCGTTTGAGTTGTGCCATTCCAGTAGTAACTGCCGGGAGCCCTGAGAAATTAAAGATTGCATCGAAACTGGGAGCTGCTGCTGGGTTCAATTACAAAGAGGTTGATTTCTCAGATGGAATTTTGCAGTTTACAGAAGGCAGAGGGGTTGACGTCATCCTAGACTGCATAGGTGGATCCTGTTGGGAAAAGAATGTTCGTAGCTTGGCTATGGATGGAAGATGGGTGCTCTATGGTGTGATGGGGGGGAAATCAGTGGGGGGGGATTTGCTTGGGAAGCTACTGTTTAAGCGAGGCCACATTCTCAGCAGTCTTCTCAGGTCTCGAAGTCTACAGTATAAAGCAGAACTGGTCCGAAGCTTCACTGAAGAGGCGTTGACACACTTCCAGTCAGCAGATCAGAGTACGTCACTGAGGCCTATTATCGACAGTGTGTTCACCATGGATGATATTGCTGATGCACACAGGCATATGGAGGCCAACAAAAACATTGgaaaaatcataattaaaattTCTTAAACATGACCTATGCAACAACACAAGCAGATctattttattatgattatttacatGCCATGTTTCAGATTTTAACATTCATGCAAATACTAAACATTCAGAAGCTTTTTTATATGAAAGAACACCATACAGATCAAACGTCAGTTTCATAAAGAATTTTTCCATCACATTCTGAGAGACACATCTTTAAAAAGTCATGTCtattcatgtatatatatattacatatctacattgtc

Function

symbol description
tp53i3 Orthologous to human TP53I3 (tumor protein p53 inducible protein 3).

NR:

description
PREDICTED: quinone oxidoreductase PIG3 isoform X1

GO: NA

KEGG:

id description
K10133 TP53I3; tumor protein p53-inducible protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251997.3 True 1362 mRNA 0.44 7 24732177 24736377

Neighbor

gene id symbol gene type direction distance location
LOC103029186 cenpo,LOC103029186 coding upstream 2159 24726218 ~ 24730018 (+)
ankrd66 ankrd66 coding upstream 46317 24682186 ~ 24685860 (+)
LOC103027511 NA coding upstream 52937 24673440 ~ 24679240 (+)
LOC111188244 NA coding upstream 58714 24670622 ~ 24673463 (+)
LOC103027217 vsnl1b,LOC103027217,LOC107102224,LOC105895729,LOC103379314 coding upstream 76085 24643690 ~ 24656092 (+)
LOC103030357 LOC108270045 coding downstream 636 24737013 ~ 24742797 (+)
LOC103045971 NA coding downstream 6592 24742969 ~ 24747805 (+)
fuca2 fuca2 coding downstream 29604 24765981 ~ 24771053 (+)
LOC103032669 NA coding downstream 36429 24772806 ~ 24793331 (+)
LOC103034484 LOC107576683 coding downstream 62655 24799032 ~ 24805385 (+)
G83123 NA non-coding upstream 89522 24642392 ~ 24642655 (+)
G83121 NA non-coding upstream 95295 24636606 ~ 24636882 (+)
G83120 lace1,lace1a,LOC108428707,LOC108269919,LOC108239053 non-coding upstream 96979 24630873 ~ 24635198 (+)
G83116 NA non-coding upstream 112240 24619695 ~ 24619937 (+)
LOC111193227 NA non-coding upstream 155626 24572328 ~ 24576551 (+)
G83167 NA non-coding downstream 35505 24771882 ~ 24772793 (+)
G83180 NA non-coding downstream 102153 24838530 ~ 24840128 (+)
G83295 NA non-coding downstream 156866 24893243 ~ 24893639 (+)
G83307 NA non-coding downstream 195542 24931919 ~ 24932539 (+)
G83354 NA non-coding downstream 391583 25127960 ~ 25187909 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other upstream 589945 24139389 ~ 24142232 (+)
G82811 psma3,LOC107729246,LOC107725600 other upstream 758202 23909682 ~ 23973975 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other upstream 854407 23875439 ~ 23877770 (+)
G82609 baz1a other upstream 1500859 23230430 ~ 23231318 (+)
G82488 NA other upstream 2374042 22357644 ~ 22358135 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 159517 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 197787 24934164 ~ 24936186 (+)
c9h8orf74 NA other downstream 293620 25029997 ~ 25034121 (+)
supt3h supt3h other downstream 424541 25160918 ~ 25329482 (+)
LOC103033015 LOC108423550,LOC108270308 other downstream 1183180 25919557 ~ 25975283 (+)

Expression


Co-expression Network