LOC103031945 (itpk1,itpk1b,LOC108435758,LOC107664466,LOC107561681,LOC106597151)


Basic Information

Item Value
gene id LOC103031945
gene name itpk1,itpk1b,LOC108435758,LOC107664466,LOC107561681,LOC106597151
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 18580869 ~ 18632555 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007252512.3
GTAAGTCATGGCTGGAAAGAAAGCGCTGGCAGCCGGACTTGAATGAAGCCAGCCTTACGTCAGGAGGGTGTGATCATCAGTGTGGGCGTCCAGTTCGCAATTTCAGCGCGATTGGGCTGCATATAGCTATTAGCGCTAGCCAAGTTATCGCTATCGTTTTCGCTATTCAGTTTAGTACAGTTCACCAGCTCCCCGCGAGCGAGAAGACCATGGATAAGGAAGAGACCCCAGACATGCTAACCAGCTAACCAGCCAGCCAGCTGCTGCTATCCGACGGAATGGGAGatgtgctagctagctaacgttagGGTTGGGTAAGAGCACGGTTTCCTGTTGTCGCTGGAAAGCTAGCCAGAGAGCTAGGTCGAGTCTGTCACATCTGGGCTGAGACTTGCCGCCAGAAGAAGATGCAGACGTTTCTGAGAGGTAGACGTGTGGGTTACTGGCTCAgcgagaaaaaaatgaagaagctCAATTTCCTGGCCTTCGCTGACATGTGCAGGAAAAGAGGAATAGAAGTGGTTCAGCTTGATCTGAGCCAGCCTCTGGAAGAGCAGGGCCCGCTGGACGTCATCATCCACAAGCTGACAGATCTGATCTTGGAGGCGGACCAGAACGACACTCAGTCCCTGTTGCTGGTCCAGCGTGTGCAGGACTACATAGATGCCCACCCAGAGACCATAGTGCTGGATCCACTTCCAGCCATCAGGACTCTGCTTGACCGCTGCAAGTCTTACCAGCTTGTCCACCGGATAGAGGACTTCATGCAAGATGAACGGATATGCTCTCCTCCATTCATGGTGCTGAACAGTGAGTGTGGGCCAGACACACTGGAACAGATTGAGCAGCATGGTCTTACATTCCCCTTCATTTGCAAAACACGGGTTGCACACGGAACCAACTCCCATGAGATGGCAATCATCTTTAGTGCTGAGGACCTAAAGGACGTGAAGCCCCCATGTGTTATTCAGAGCTTCATCAACCACAACGCAGTGCTGTATAAGGTGTTTGTAGTGGGTGATTCGTACACTGTAGTTGAGAGACCCTCCCTTAAGAACTTCCCGTCTGGCCCAGCCGACAGGAAAGCTATTTTCTTCAACAGCCACAATGTGTCAAAGCCAGAGTCGTCCTCAGACCTTACCTCTagagataatgtagagGGTGTTTCCCAGCCCCCGAGTGATGATGTGATTAGGGAGCTGTCTAGATCTCTGCGACAGGCTTTGGGGGTGTCGCTCTTTGGCATCGACGTCATCATCAACAACCAGACAGGCCAACATGCTGTCATCGACATCAATGCATTCCCTGGATATGAGGGTGTTCCAGAATTCTTCAGCGACCTCCTCAACCACATTACTAGTGTCCTTCAAGGCCAGTCGTCCAGTGACTGCCCGACCGCACCCACTGCTCAGCCCACCTCCGGACAGCTAACAGCCCTGGCCTCAGGGGAGCGGAGCTGCGCCCCCTCGCAAGAGTGCTGCAGCCTGCTGAGCAAGGAGtcggacagcagcagcagcccgtGGATTGTGGAGGGCGAGGGAGGCCTGAAGGGTTCATGCCAGAGACTGGGCTGCACCCCAGCCATGTCCCCCAACTTCCAGCAGCACTGCGTGTCCACGATAGCCACCAAGGCCTCCTCACAGTGACAGCCTTCTACTCCCTTACCCTCCACCTCTTCCTCTGAACAAATAGTGGAAAAAACACAACGTGAATaatattaatgaataataataactgatattattaatatatctgtcatcagaaataaacattttactatATTGGTTATGACGGTGTCGATAATGGGGTAATGGATTCCCTATGCCTTTccgtattttttattattttttttccttctttttcagTCTAATAACTCACAGTACTGTAATGTGAACTTTGAAGAATTCAGCAACGGTCAGCTGATTTGTTCTATTATTCATGTTtgtcttttgtgtttgtaaTTTCATGTGTATAATCATGTGGAGAATGAGTGGAGAAGTGTTACACACTAGGCAGTTTGGGAGTAAGGGGGAAGAGACATCAGAAGACTTTGACATCTTTCTTTGCTGTTGGCAGGAGTAGAACCTTGATGATGTATTCATCTGGCAGTGGACATGTACACACATACTTATAAACACCTAGTGTCAGTCCTGCATTGATGTGCAAGTACAGATCTACCAGTCAGCTCCGGTATTAGGAGCAAGTGCAACACTGATGGAATTTAGCTACTTGTAAGggaaaaaacaattattatgtTCTATCTCTTTAGTGGCCATGGAGAGCAACACGGAGCAGTTGATCTTGTGAAGCTCATAAAACATTCACAAAGCTTAAGTAAAACATTGACACTTGGCATTGCAGTTCATATGCTGGAGAAATGCATAAAGAGAATGTCAAGCGTCATTTGTTTTAGATAGTGGTCTAAAAGGagatttacaaatttacaaacaGAAAGGTAAAATGCAACATTTGCACCTTGTTTACACCTGATCACTTTAAACCAGATTAGTATCTGGATTGCATTCTGATAATAATTTAGCCACATGCATTTATACTTGGTAGACAAATATGTCTCCAGTTATTGAGAGAGAAATCCAATACTCTGTTTGGATGGAGCAATATTGGGAGGAGATTTGGTTGTTGAATGTGTCTTGTAGAGAATGTGTTTACACCTCTGGAACATGTGGCTCAATGATGGACAGTATGTCCAAAGGTTTTATCAATATATGACTTTGGgtttatgtaattatatatgaACAAAATGAAAGCCACAGAGAAACTGCTACACATGAATTTGCCAATTCACTTCATGTGTCTTGTAATGATTGTCAGTCAGTTTTGAATTCCTGTCCAGCTCTGTTTATGCCTCTATTAAAATGCAGACTGGTTGTTTATACTGGCCTGTGTCTTATCCAGATGtaatccagatataatccttatatttaaaacaaatgaagtgaccaggtgtaaactgGGTCTAAGACtgaatgattgtgtgtgtgtgtgtgtgtttgtatgtgtgtgtctgtttttaaCAGATATTGTTGCATTCCTCAAATTCCAGTATTGTGGGTGAGGTCTGGTGAAACTGTTTTTGAACTGTACATTTTTATGAAGTAACATCTTCCTAACTTAAATCACACCCTTGTTTAAGAACAAAGACTTGTTATATGATGACTGTATATATGGAGTCATTTTGCTATTTTGAAATTGCACAGAAAGAGAACTATGTTTTTGAGGAACTTCACTTGAAGGCAAAAGTTAAATGCCTGTAAACTAATCATTCCTGTTTTTGATGAGCGAGAATGATTGCTTTTTAGTTGTATACATGATTATTAGTTATGAGATTATAGTGAATTATcactaatatataaatatagaaacTGATTATACAATAATAATCCAAATTTGTGGAGGGAAAATGTGAGAAATGAGGGAGTTTGCATTCCAAAGAGGGACTGCTTAAGCgctttttctgaaatgtggtAAGGAGGCTATGTGTTGAAGACTCAGAGGTTTGGAAACAGTTACTTACATTTGTTTAGAAAATGTCGAATCGGATATCCTTGTGTACCTGGTTTACCTAAATGAAGGGCATTTCTTTTACAGGCATCACAGGTTTTAAAAGCCTTTGGTTGTGCAAAATGTGCCATCTCTGGCTGATCTACCTTTGTTTTGGTAAATTCTACAGTCTCTTGATCTACAGTCTCTGAATTAATGTACTAATTTTTGTTTATATGGTAGTCATACATCTTTTAGTTAGATAATGCAATATtggtgcttttttaaccaagatAAAATATCactaaaatcagtttaaaatgtctgttttattgGGATTGagtagaacaaaatgttaatagTGGGAATACATTGGTTTTGATTGATTCAGTGTTACTTTCAAAAAGTAAGCTTAACTGTTTAGCATGTAAACGGAGTTATGGACATTTAGTGGTTTaccttttttaatattgttttttttttttataccttgTTTATTCCTGTGGACAGTCAtgtacacaacatttttttttgttattttaatcattacaGAACATAACAGAGGACTTAATTGTCTACAGGTGCCGTTTTGGAAAAACGTTATCTATGATGTTAATGCTGTCTGTGTTGTGTTCAGTCACTTCCCATTCGTACTTGAGGATCTGCTTTGGCTCACACAGCTGTAAACCAACTCTTTAAATCTTTGTGGTGAAGAACTGTGGTACTTCTGCTGAGAGTGAATGGGGCAGATGCCCTCTGTAGTTCTTTTCTTTTACCTGCAGGGGGCTTCACTTACAAACGTAAAGCATCACCTTCTCAGttcagtatgtgtgtttgtgtatatatatata
>XM_022672860.1
TGTAGATAACCTAACTGTTAgGGTTGGGTAAGAGCACGGTTTCCTGTTGTCGCTGGAAAGCTAGCCAGAGAGCTAGGTCGAGTCTGTCACATCTGGGCTGAGACTTGCCGCCAGAAGAAGATGCAGACGTTTCTGAGAGGTAGACGTGTGGGTTACTGGCTCAgcgagaaaaaaatgaagaagctCAATTTCCTGGCCTTCGCTGACATGTGCAGGAAAAGAGGAATAGAAGTGGTTCAGCTTGATCTGAGCCAGCCTCTGGAAGAGCAGGGCCCGCTGGACGTCATCATCCACAAGCTGACAGATCTGATCTTGGAGGCGGACCAGAACGACACTCAGTCCCTGTTGCTGGTCCAGCGTGTGCAGGACTACATAGATGCCCACCCAGAGACCATAGTGCTGGATCCACTTCCAGCCATCAGGACTCTGCTTGACCGCTGCAAGTCTTACCAGCTTGTCCACCGGATAGAGGACTTCATGCAAGATGAACGGATATGCTCTCCTCCATTCATGGTGCTGAACAGTGAGTGTGGGCCAGACACACTGGAACAGATTGAGCAGCATGGTCTTACATTCCCCTTCATTTGCAAAACACGGGTTGCACACGGAACCAACTCCCATGAGATGGCAATCATCTTTAGTGCTGAGGACCTAAAGGACGTGAAGCCCCCATGTGTTATTCAGAGCTTCATCAACCACAACGCAGTGCTGTATAAGGTGTTTGTAGTGGGTGATTCGTACACTGTAGTTGAGAGACCCTCCCTTAAGAACTTCCCGTCTGGCCCAGCCGACAGGAAAGCTATTTTCTTCAACAGCCACAATGTGTCAAAGCCAGAGTCGTCCTCAGACCTTACCTCTagagataatgtagagGGTGTTTCCCAGCCCCCGAGTGATGATGTGATTAGGGAGCTGTCTAGATCTCTGCGACAGGCTTTGGGGGTGTCGCTCTTTGGCATCGACGTCATCATCAACAACCAGACAGGCCAACATGCTGTCATCGACATCAATGCATTCCCTGGATATGAGGGTGTTCCAGAATTCTTCAGCGACCTCCTCAACCACATTACTAGTGTCCTTCAAGGCCAGTCGTCCAGTGACTGCCCGACCGCACCCACTGCTCAGCCCACCTCCGGACAGCTAACAGCCCTGGCCTCAGGGGAGCGGAGCTGCGCCCCCTCGCAAGAGTGCTGCAGCCTGCTGAGCAAGGAGtcggacagcagcagcagcccgtGGATTGTGGAGGGCGAGGGAGGCCTGAAGGGTTCATGCCAGAGACTGGGCTGCACCCCAGCCATGTCCCCCAACTTCCAGCAGCACTGCGTGTCCACGATAGCCACCAAGGCCTCCTCACAGTGACAGCCTTCTACTCCCTTACCCTCCACCTCTTCCTCTGAACAAATAGTGGAAAAAACACAACGTGAATaatattaatgaataataataactgatattattaatatatctgtcatcagaaataaacattttactatATTGGTTATGACGGTGTCGATAATGGGGTAATGGATTCCCTATGCCTTTccgtattttttattattttttttccttctttttcagTCTAATAACTCACAGTACTGTAATGTGAACTTTGAAGAATTCAGCAACGGTCAGCTGATTTGTTCTATTATTCATGTTtgtcttttgtgtttgtaaTTTCATGTGTATAATCATGTGGAGAATGAGTGGAGAAGTGTTACACACTAGGCAGTTTGGGAGTAAGGGGGAAGAGACATCAGAAGACTTTGACATCTTTCTTTGCTGTTGGCAGGAGTAGAACCTTGATGATGTATTCATCTGGCAGTGGACATGTACACACATACTTATAAACACCTAGTGTCAGTCCTGCATTGATGTGCAAGTACAGATCTACCAGTCAGCTCCGGTATTAGGAGCAAGTGCAACACTGATGGAATTTAGCTACTTGTAAGggaaaaaacaattattatgtTCTATCTCTTTAGTGGCCATGGAGAGCAACACGGAGCAGTTGATCTTGTGAAGCTCATAAAACATTCACAAAGCTTAAGTAAAACATTGACACTTGGCATTGCAGTTCATATGCTGGAGAAATGCATAAAGAGAATGTCAAGCGTCATTTGTTTTAGATAGTGGTCTAAAAGGagatttacaaatttacaaacaGAAAGGTAAAATGCAACATTTGCACCTTGTTTACACCTGATCACTTTAAACCAGATTAGTATCTGGATTGCATTCTGATAATAATTTAGCCACATGCATTTATACTTGGTAGACAAATATGTCTCCAGTTATTGAGAGAGAAATCCAATACTCTGTTTGGATGGAGCAATATTGGGAGGAGATTTGGTTGTTGAATGTGTCTTGTAGAGAATGTGTTTACACCTCTGGAACATGTGGCTCAATGATGGACAGTATGTCCAAAGGTTTTATCAATATATGACTTTGGgtttatgtaattatatatgaACAAAATGAAAGCCACAGAGAAACTGCTACACATGAATTTGCCAATTCACTTCATGTGTCTTGTAATGATTGTCAGTCAGTTTTGAATTCCTGTCCAGCTCTGTTTATGCCTCTATTAAAATGCAGACTGGTTGTTTATACTGGCCTGTGTCTTATCCAGATGtaatccagatataatccttatatttaaaacaaatgaagtgaccaggtgtaaactgGGTCTAAGACtgaatgattgtgtgtgtgtgtgtgtgtttgtatgtgtgtgtctgtttttaaCAGATATTGTTGCATTCCTCAAATTCCAGTATTGTGGGTGAGGTCTGGTGAAACTGTTTTTGAACTGTACATTTTTATGAAGTAACATCTTCCTAACTTAAATCACACCCTTGTTTAAGAACAAAGACTTGTTATATGATGACTGTATATATGGAGTCATTTTGCTATTTTGAAATTGCACAGAAAGAGAACTATGTTTTTGAGGAACTTCACTTGAAGGCAAAAGTTAAATGCCTGTAAACTAATCATTCCTGTTTTTGATGAGCGAGAATGATTGCTTTTTAGTTGTATACATGATTATTAGTTATGAGATTATAGTGAATTATcactaatatataaatatagaaacTGATTATACAATAATAATCCAAATTTGTGGAGGGAAAATGTGAGAAATGAGGGAGTTTGCATTCCAAAGAGGGACTGCTTAAGCgctttttctgaaatgtggtAAGGAGGCTATGTGTTGAAGACTCAGAGGTTTGGAAACAGTTACTTACATTTGTTTAGAAAATGTCGAATCGGATATCCTTGTGTACCTGGTTTACCTAAATGAAGGGCATTTCTTTTACAGGCATCACAGGTTTTAAAAGCCTTTGGTTGTGCAAAATGTGCCATCTCTGGCTGATCTACCTTTGTTTTGGTAAATTCTACAGTCTCTTGATCTACAGTCTCTGAATTAATGTACTAATTTTTGTTTATATGGTAGTCATACATCTTTTAGTTAGATAATGCAATATtggtgcttttttaaccaagatAAAATATCactaaaatcagtttaaaatgtctgttttattgGGATTGagtagaacaaaatgttaatagTGGGAATACATTGGTTTTGATTGATTCAGTGTTACTTTCAAAAAGTAAGCTTAACTGTTTAGCATGTAAACGGAGTTATGGACATTTAGTGGTTTaccttttttaatattgttttttttttttataccttgTTTATTCCTGTGGACAGTCAtgtacacaacatttttttttgttattttaatcattacaGAACATAACAGAGGACTTAATTGTCTACAGGTGCCGTTTTGGAAAAACGTTATCTATGATGTTAATGCTGTCTGTGTTGTGTTCAGTCACTTCCCATTCGTACTTGAGGATCTGCTTTGGCTCACACAGCTGTAAACCAACTCTTTAAATCTTTGTGGTGAAGAACTGTGGTACTTCTGCTGAGAGTGAATGGGGCAGATGCCCTCTGTAGTTCTTTTCTTTTACCTGCAGGGGGCTTCACTTACAAACGTAAAGCATCACCTTCTCAGttcagtatgtgtgtttgtgtatatatatata

Function

symbol description
itpk1b Predicted to enable inositol tetrakisphosphate 1-kinase activity; inositol-1,3,4-trisphosphate 5-kinase activity; and inositol-1,3,4-trisphosphate 6-kinase activity. Predicted to be involved in inositol phosphorylation. Predicted to act upstream of or within inositol trisphosphate metabolic process and phosphorylation. Predicted to be active in cytoplasm. Orthologous to human ITPK1 (inositol-tetrakisphosphate 1-kinase).
itpk1 Enables phosphotransferase activity, alcohol group as acceptor. Involved in necroptotic process. Predicted to be located in cytosol. Predicted to be active in cytoplasm.

NR:

description
PREDICTED: inositol-tetrakisphosphate 1-kinase-like

GO: NA

KEGG:

id description
K00913 ITPK1; inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007252512.3 True 4352 mRNA 0.42 11 18580869 18632555
XM_022672860.1 False 4065 mRNA 0.41 11 18581292 18632555

Neighbor

gene id symbol gene type direction distance location
plk4 plk4,LOC107703461,LOC107561682,LOC107664465,LOC107718857,LOC107586821 coding upstream 1298 18568668 ~ 18579571 (+)
hspa4l hspa4l,LOC107561683,LOC107586823 coding upstream 13215 18551021 ~ 18567654 (+)
mrpl35 mrpl35 coding upstream 52180 18523754 ~ 18528689 (+)
LOC103034157 LOC108425685,LOC108269929,LOC107719399,LOC107664487,LOC107586877,LOC106610886,LOC106580683 coding upstream 70400 18503191 ~ 18510469 (+)
zfyve28 zfyve28 coding upstream 83830 18481679 ~ 18497039 (+)
eml5 eml5,si:dkey-1f12.3,LOC108435760 coding downstream 1614 18634169 ~ 18704075 (+)
npc2 npc2 coding downstream 75857 18708412 ~ 18712887 (+)
atg2b atg2b,LOC107738272,LOC107664023 coding downstream 83983 18716538 ~ 18749129 (+)
msh4 msh4 coding downstream 118138 18750693 ~ 18764580 (+)
ktn1 ktn1 coding downstream 133098 18765653 ~ 18800218 (+)
G81558 chmp3,LOC107732730,LOC107586824 non-coding upstream 30662 18545469 ~ 18550207 (+)
G81539 NA non-coding upstream 80158 18447388 ~ 18500711 (+)
G81540 NA non-coding upstream 81991 18475117 ~ 18498878 (+)
G81547 NA non-coding upstream 109298 18470407 ~ 18471571 (+)
G81537 LOC108425611 non-coding upstream 138158 18441069 ~ 18442711 (+)
G81600 isca2 non-coding downstream 72260 18704815 ~ 18706282 (+)
G81602 gskip,LOC107731910,LOC107561679 non-coding downstream 81650 18714205 ~ 18717199 (+)
G81701 NA non-coding downstream 233121 18865676 ~ 18865988 (+)
G81705 NA non-coding downstream 298601 18931156 ~ 18937144 (+)
G81708 NA non-coding downstream 308853 18941408 ~ 18941814 (+)
LOC103033848 LOC108435752 other upstream 59922 18511622 ~ 18520947 (+)
LOC103035760 rtkn2,rtkn2a other upstream 111234 18460123 ~ 18469635 (+)
cmpk2 cmpk2 other upstream 543795 18027307 ~ 18037074 (+)
G80857 NA other upstream 2997538 15563987 ~ 15583331 (+)
LOC111193203 NA other upstream 3377082 15174535 ~ 15203787 (+)
G81704 NA other downstream 297683 18930238 ~ 18930754 (+)
G81761 NA other downstream 1033181 19665736 ~ 19666047 (+)
G81763 NA other downstream 1040572 19673127 ~ 19673638 (+)
ralgapa2 ralgapa2,LOC107687934 other downstream 2888352 21520907 ~ 21673438 (+)
G82488 NA other downstream 3725089 22357644 ~ 22358135 (+)

Expression


Co-expression Network