LOC103041063 (ccdc88c,LOC107582943)


Basic Information

Item Value
gene id LOC103041063
gene name ccdc88c,LOC107582943
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 21194708 ~ 21279138 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007252545.3
GCTCGGTAACAAAGTGAGGCGGCGGAGCGGAGCGTGGGGAGCGGAGGCGTGGAGCCCGGGCTGCTGGAGATGAACTTTATTCGTTTGCGGCCATAACTGTTTTAGTTCCGCAGGACTTTTGGATAGATTTACACTCGTTTATAAAGTTGGGGGTGAATTTGTCCGGCCGCCGCTGAATTTTCCTGGGTTTTGGTTTCGCCTCCTCGCTTTTCGCAGGGCTGCTGGTTCTGGTTTATGGGTGAGCACTTTGTTGTGCGGGACCCTCAGCAGGAGGAAATGGGGCTGTAAAAGTTCAGCGCTGCTCTCTCTCACAGCGCCCCGCTCGAGTGGATGGAAAGTACGGGGCTTTTGGGGAGTTTCTGGAGTGTTTTTAAACTTGTTATGTTTGTTACTGTGAATCCggctgaacagcagcagcagcacagcattattattgtttagcagcagcagtagcgtGGAGTCTGGAACGCCTGGGAATGTGAGCACCTCGATTCTGGAGCTAAAAGTGAGCTAAAAGTGTTGAAGCGCTTCTGGAGTATCTTATCCTTCAGCAGAAATGGATCTTACCCTGTCTGAACTGATGTCCAACTTCATGGAGTCCCCGCTGGTGGTCTGGGTGAAGACCTTCGGCCCACTGTCTTCCAACTTGGACGACAAGCTCTCCATGTTTATGGAGCTAGTGGATGGGGTCTTCCTTCATAAGATCATGACCCACATAGATCCAAATCCAACAAACCACCGGGTGAACAAGCAGGTGAACAACGACGTAAACCTGAGGATCCAGAACCTCAGCACTGTTATCAGACACATCAAAAACTATTACCAGGAGaatctccagcagctcattttgATGACCTTACCCAATGTGCTGACCATCGCCAAGGATCCTTTGTCAGGAAAGAGTATGGAGGAGATGAAGAggctgctactgctgctcctAGGCTGCGCTGTTCAGtgtgagcGTAAAGAGGAGATCATTGAGAAGATTAAGCTGCTAGACATTGAAACGCAAGCAGCCATCGTCTCCCATATCCAAGAGGTAACCCACAACCAGGAGAATGTTCTGGACCTGCAGTGGCTGGAAGTGGGGGAGCTGCCTGCTGAGGAGCTGGACCCTCTCTCCCGCAACATGGCCTTTCACCTCCGCAAACTCATTGATGAGCGGGATGAGTGCTCAGAGCTGGTCTTGGAGCTGACCCAGGAGAGGGATTATCTGCAATCCCTGCAGCCCCCCAGCCCTGTGAACTTCTCCAGCCCTGAGAGATCCTCCCAGCTCGCTGTGCTTTCAAAAGAAGACCGCCAGCACCTGGCAGTGGAGCTCGCCGATACCAAGGCTAAACTGCGCCGATCTCGACAAGAACTAGAGGAGAAGACGGAGCATTTGATAGACACCAAGAATGAATTAGACAGGCTGGATGTGGAGATGCAGAAGTTGAAGCAAGAGAACACTCAGCTGCTGGCCGAGGCACGGTCAGTTCGAGCATATCGGGATGAAGTGGATGCTCTGAGGGAGCGTGCTGGGAGAGTAGACAGACTCGAGACAGAACTGGCTCGGTTCAAAGAGAAGCTGCACGATGTTCACTTCTACAAGGCCCGCGTGGAGGAGCTCAGAGAGGACAATATGACTCTGCTCGAGACTAAGGCCATGCTGGAGGAGCAGCTGAGCACAGCTAGGGGGCGCTctgacaagctgcatgagctaGAGAAGGAGAACCTCCACCTGCGCTCCAAACTGCACGATATGGAGATTgATCGGGACAGTGATAAGAAGCGTCTAGAGGAGCTGCTGGAAGAGAACATGCTACTGGAGATCTCACAGAAGCAAAGCATGAACGAGTCTGCTCACCTGGGCTgggagctggagcagctttcTAAGAACAATGAGGtcaatgaagCTCGCAAATCGTTTGTGTTTGAGCTGAATGAGTCAGCCTCCAGCCGGTTGCTGAAACTGGAGAAGGAGAATCAGAGCCTGCAGAGCACCATTCAGGAGCTGCGTGAGGCATCACTCAGCTTAGAAGAAGGACAGCTCCATGCCATGGAACTGGAGAGGGAGAACCAGGGCCTCAGCAAGAAGATTGAGCGTCTGCAGACCCAGCTGGATCAGGAGAAGCAGACCACACAGGACATGGAAAGCTTGGGAGAAGAGCTACTCAAGGAAAAgcagaaactggagaaaacccTGGAGACTGTGCAGGCAGATAAAGACAAACAGaTCTCTGAgctggaaaaagaaaaggagcATCTGAACCAGGCAGTCAGTTCCCTGCGGAAGCGAGCTCAGGTGGACAGCGAGGCCCGTGTTCGGGAGGTAGAGACGGAGAACCGTGTCCTCCACCAGACTATCTCTGAGACTGGAGGAAAGCTGGCGCGACTCGAGGCTGAGAAGCGTCAAGCCACCAAGGAGCTGGAGGGTCTTCGGGAGCGTGGAGAGCGCTGTGTGGAGCTGGAGCGAGAGGTGGCGCGACTGGAACGCGGGCGAGAGCAGCTGCAGCGGGAACTGGCTTCTCTCAGGATCGCCAGCGAGCGCACCGAGGCCCTGGAACGCGAGAACGCCACCTTGGAGCAGGACAACCGGCGGCTGAAGAAGCAGGCAGATGCAGCGCAGAACGCTAACGTGCGCCTGGCCACTTTAGAGAAGGACCGTCGGcaactggaggaggagaacctCGAACAGCGACGTGCTCTGGACGGTCTCCGGCCGGCTGCTGCTCGCCTTGCACAGCTACAGCTGGAGCACAGTGAGCTGGAGCGCGAGAGACAGGAACTTCAGGGCACCCTGGAGGAACTCAGAGCCCAGGCCAAGCGCTGCGAGAGGCTGGATCTCAGCTGCAACAGCCTGAGTCAGGAGAACCAGAGACTGCAGAAAAGCCTGGACAGCAGTTCTGCCAAAATCCAGGACCTAGAGGGTCGGCTGCGAGAGTCCGAGAGCCAGAGCAAGGAGGTCCAGAAGGAGCTGGTGGAGGTGAGGCAGGCAGGGAGCCGAGCAGAGGAGGCTGAGAAGCAGAGGAGAAGCATGGAGCAAGAGTTGGGccaggcagagaaagagaggaagcaACTGGAGAAAGAGGCCCACAGGCTGAGGAGGCAGCTGGAGGCGAAGGAGGCAGCGCTGGAGGAAAGCTCGCTCAGGCTCAGCAGCATGGAGAAAGAGGGCACAGCTCTGAACAGGGAGCTTGCACGCCTCAGAGAAGCTGCCGGGAGGGTCAAGGAGCTGGAAAAGGATAACAAAGACCTGCATAAGCAGGTCACCATCGACAAGAGGACCCTGGCCACTCTCCGAGAGGAGCTGGTGAATGAGAAGCTGAGGGTGCAGCAGCAGTGTAACGAGCTGGAGAAGCTCAGTCATGAGCTGGAGAAGATTGGCCTGAACCGGGAGAAGCTGCTGCAGGAAGAGCACAGCTGTGAGGACAAtaaatataaaattctGGAGACCAAGATCGAGTCAACACTAAAGAAGACTCTGGAACTGAGGGAGGAGAAGATCCAAAGTCTGGAGTCTCGTCTGGAGGAAAGCAGCAGCTTGAACCAGCAGCTACGCACTGATCTCACTACTGTGAAGAAAACACTGGAGGCTCTGAGGCAGAggcaggaggaggaggctgCCCACTCTGAAATATCCCAGAAATCTGTGGAGCAGGGCCGGTGTGGTTCCAGCCAGGAGAAATGGGAGACGGAGCAGAGAGAGGCCACCGCTGAACTCCTCAAACTCAAAGATCGACTGATTGATGTGGAGAAGAATAATGCGGCTCTGCAGACAGAGAAACACCTCCTGAAGGAGCAGTTGAAGCAGCTGGACTCTCAGAACTCGCAGCTAAACGCTCAGACACTGGCTCTGCAGAAACAGGCTGCAACACTGCAGGAGCAGAACACCGCCCTGCACAAAGAGACGGCCAAACTACAGGTGGAGAACTCCACGCTGAGCTCTCAGAATGCATCTCTGCTCTCTCAGTATGGAGCTCTGCAGACTCAACTGCAGACTGCGGAGGCAGAAGCAGAGGCGCAACAGAGGCAGAAGGAGGAGGTGCGGGCAGCCCGGGACAGCGTCACCCACGATCACGAGCGTCTGCTGGCTGTTCACGAGAGACAGGCCGCTGAGTACGAACAGCTCATCTCCCAGCATGCCACACTGAAGAGCAACCAGAGAGCACTGGAACAGGAGCATAAAGCACTGGAGAACAAgtATGTGCTGCTGCTAAAGCAGAAGGATGCTATGGAGGCACTGGAGGCTTCTTtgcagaaagagagggagagtttGGGAGAGGAGATCCGCAAGAACACTCTGATCCTGGAGGAGAACCGAGGCCTGAGAGAGGACATGGACAGgttgtctcacacacactcgcagcTACGGCAGGAGTATGATGGGCTGCAGCATCAGACCAAGGAGCTAAAGACGTCTCTGAACGAGTCTCAGTTGGAGCTGAACCGCTGGCAGGCACGGTTTGACCAGCTGAAGGAGCAGCACCAGGGTCTGGACATCTCAATGACCAAACTGGACAACCACTGTGAGCTGCTGACCCGGCTGAAGGGGAacctggaggaggagaaccACCACCTCCTGAGCCAGATCCAGATGCTGAGCCAGCAGAACCAGACGCTGCTGGAGAGAACCATGGAAAGCAAAGAACTCTACCACGAGGAACAGAAGCAGTAcatTGATAAGCTGAATGCATTACGAAGGCAGAAGGAGAAACTGGAGGAGAAGATCATGGATCAGTACAAGTTCTATGATCCAACTCCTAAAAAGAGGAGTCACTGGGCAGGAGCTAAAGCCATCGCCAAGCTGATCAAGCCCAAGAAGGACACTTCCCGCGAGAGACCAGAAAGCTCCCGAGAGAGAATTCGCAGTGCGCCAGACATCCCTCTGCCAGACATCCCTGTCCTCTTAGACTGCCCTGACAGCAGCCCACCCCTTCCACCCCCTCCACTACCACCCCGCCAGAACCGCCTCAGCCTGGACTCACCAGGAAACCACTCAGTAGAGGAAAACCACGTCCAGTCCCCGGTCTTCTCCCCACCACCCAACAACCGAGGACCAAGTGACAGCAGCATCTCCAGAGGCAGAGAGCTGTACCGACCAGCAGGGGGCAGCAGTGAGAGTGTGAATGGATATGAGGATCTGGCCTTTAGGAGGAGAGCCATTGAACCAGGAGCCTCCTGTTCAACCCCGCTGAACCATAATTCCCACAATGCTCCAGGCTTCACACCCCCAAGCTCACGACCAGGACGCAGGCCTAAAGGATTAATCTCAGAGGAGGACCTGCGCCTGCACTCCCTCGATGCTGGCTTTGGGTCTGGTGGTCATGGAAACGCAGGTCACAGGCCCGGGTCTGCTGATTTCAGCCGCAAcacctccagcagcagctctcCAGTCAACTCCAAAGGCTCTCTGGAGCGTCTGCAGGGCCGTTCAACCAGCCTCTCCAGTGATGATGTGGTTGGGCTCAGTCATGAAGGATCCCGCCTCAGTCAGTCCTCTCTGCTGCCTCGGAGCTCCACCCTGCCCTGTGAAACTCCACCCACTCAGCGCTCCACCCTGCGCCCCTCTCGCATCCGCCCTGCTTCACCTGGCAGTGAGATGGTGACCCTGAAGGAGTTCCTGCAAGAAAGCAATGTGCTCTCACCCCCCACTGTGCAGACAGACAGTCGGGAAGACCTGATGACTGATTATTTCACCAGAGCGAGTCGGCCAGCGCCTCTCAGGGATGGAGCCAAAACCCCTACCAGCTATGTGGTCCCCACGGTCAAAACAAGCTCCTCTGGCGCAGATGGGCGAGCCTCCAAACCAGGACAAAGTGTCAAGCCCAGCATTCGCCCCTTGGAAGCTTCTACCCCCTCTTCTCAGTCTCAGACGCTCCCTAATCGTGGAACTGGGAGCCGCCCCTCGTCCCTGCAGCACTCAGGATCTCGTGGAGGGGCCGGtttaagcagcagcagcttgagCCGCACCTTTAGCCTGGCTTCAGCTGACCTTCTCAACTCAAACGGTCCAGACAGCTACCGAGCTGAGGGGGGATCACCTGGTCAGGCCGAAGGTTTGGTGAGGCGGCCCCGGGACAGGCCACAATCGGCTAGGCCCCTGAGTGGGGATCCTACTCACCTGTCTGTGGATCCCCGGCGCCTTTCCCTGGCTCAGCCAAAAGATGAGCCCCTCCTGTCTGCCTCCCCACAAGCTGACTGGGGCTACGGAAACAGTGTAGGGCGAACAGGAGCAACAGCGAATCGCTCTGGGACATCGCAGGGCCGCTCAACCCACCAACATCACCGTGGGGAGGTGGCTATGGTCACCCCAGTGCGGGCCGTCTCCGCCCTCAGGCTGGAGGAGGTGGAAGAGCATCGAGAGCCCAGGCAGGCTGAGCCCAGCTCTCTTAAGAAGTCGGACTGTGTTGCAGAGGAGCGGCCGATAAGCACTCCAGCCTCCCCAGACCCCAATAATGACCCGCAGACTGTGTGGTATGAGTACGGCTGCGTGTAAGCCCAGGCACTCCTCGTTAGCATGGCTTTTGGCTTTGATGTAGAGGCTCAGGTGGGGAAGGGATGGAGGAAATCCTCCTTTATGTGCCCGGACATCATGATACAATTAGATCAATTAATCTGACCTTTCATGTGGTCAGGAAAAGCCCTCTGGTTTACATGTCCTTGATCTGAGCTTTGAGGAGCAGGGACTAGCACTACAACACTGCAGCCAGCTCTGCCCAAAGTGTATTTGGGGTCAGTGATGGTTGTTGACTTTTGCCTGATAGAACTGCAaagcaaatacatttaaaagccCCCACAAGCACCCGTGAAACTTACTGAAGCAACAAAGCAGAACATGCTTGGCCAGTCTCTGCAAACCCATCCAGTCCTGTGTTCAGGACTCGTACACAGCTTGGTGAAGGAATGTGTTTGGGAATGGACACGGCttaagaatgtatttttttgtttttttcccctctcctcTCATCTCCTCCCCTATCGAACACCATTGATTTCCTGCAGCTCTCTGTGGACAGGCAGGGCCTGCCAGCTCGGTTTCTATTCTGAATGCGCAAATCAAACATTGGGCTTTTGCGTGAGGGACCGCTCCCTGGATAATCACAGAGTAATTACAGTATCCATCTTTAGGAGGCGGAGGGGACAGCGTGAGTCCATCATTCAGGCAGCCACGGTGGGATTGGTTACTGGAAATGGCTACTCGCTTTCGCTCCCTGCTGACAAACCTAGTGCTCAAGCTCCTTTCCGCTGCCACGGGTTACCACCTATTTGCTGAGCGACCGTGCTATTGGCTCTGGGGTATGCAAATGGAAGAGAAGACTCAtgatgatggagagagagagatggaggggaaCAAAAAGAGAGATGAGATGAAGATTTAAGAGAGCAGGACCTAACTGTTGAAGTGATGAATGTTGATACGAAGCAGTAAATTcgcaaactttttgtttttgtttagttttactcCATTTTATGCTCTCAAGGGCATTTATAGTTATAGCTATAGACATGGTGTGTCATCAGGCATTTAACTTTTCAACACTGTGggttctttttatatatatatatgtaaatatgttgaTTGAGCACTATGCCAGCAGGAGAAACAGAGTTTAAACTAAGGTCTAAACTGGAGTCTTAACACTGGACATAATCTCCACAGCTTGACAAGATCAAGTACCAGCCTATTTTCTCATcgggttttatttttattgcaaatGAGTTGGTATCTATTGTACCAGTAACACTGTAAAATTGTTCCAATGTTCAGAAGTACTGGTTTATTTATTACCTCCCAAATAAAGACACACAGAAAATGTGTCAGAATGTGACACCCCCTcaaatattaaattgttttgTGGTTTTGGAGTGTCCACAGTGGTGACTGTTCATTCACGGCACTGTATAATTAATTTATGCAGATTTTCCCCAAGTGGTTCCCCTGATATGTTTAACAAAACATTAGTCCATTAGTCCTTTTTTAGCAGTGGTGCTCTTCCTCATTAACATTGCCATAATGTGAAGGCTCCAGTGGAAAAGAGATGGAGGAATTTCTTCCGTGCCTAGACATCATGCAATTAGCTTAATTAGTCTGACCTTTCATGTGACGAGGAAAAAGCCCTCTGGTGTACTTGTTTATCAGGGCTTTAAGGAATGGTCACGTCCACCAAAGCAGTTAGTTAAGGTGAGGTTATTAGTAAGTTCACTAAGTTCTTTACGTCTTCCTCAGCAGACCCGTGAGAGTGCACTTATTGTAATGGGGGCTTCACTCAAACATGGCTACCCAGTTACACAACGTATACCCAACAATAACATGCGCAATTTTCaaacactactacaacaaaGACTTGATTGTTGACGTGTGATGTTTTGATTAGTCGCCTAATAAGACGTGTGATGGCTGTGATTGGTTCTAGTGTTTGTCATTTTGTATAGCAGAAGCTGTTGTCCAAAAACTGAACTCTTTGTAATAAAAACTTTCCAAATTTA
>XM_022672922.1
CGCTCGGTAACAAAGTGAGGCGGCGGAGCGGAGCGTGGGGAGCGGAGGCGTGGAGCCCGGGCTGCTGGAGATGAACTTTATTCGTTTGCGGCCATAACTGTTTTAGTTCCGCAGGACTTTTGGATAGATTTACACTCGTTTATAAAGTTGGGGGTGAATTTGTCCGGCCGCCGCTGAATTTTCCTGGGTTTTGGTTTCGCCTCCTCGCTTTTCGCAGGGCTGCTGGTTCTGGTTTATGGGTGAGCACTTTGTTGTGCGGGACCCTCAGCAGGAGGAAATGGGGCTGTAAAAGTTCAGCGCTGCTCTCTCTCACAGCGCCCCGCTCGAGTGGATGGAAAGTACGGGGCTTTTGGGGAGTTTCTGGAGTGTTTTTAAACTTGTTATGTTTGTTACTGTGAATCCggctgaacagcagcagcagcacagcattattattgtttagcagcagcagtagcgtGGAGTCTGGAACGCCTGGGAATGTGAGCACCTCGATTCTGGAGCTAAAAGTGAGCTAAAAGTGTTGAAGCGCTTCTGGAGTATCTTATCCTTCAGCAGAAATGGATCTTACCCTGTCTGAACTGATGTCCAACTTCATGGAGTCCCCGCTGGTGGTCTGGGTGAAGACCTTCGGCCCACTGTCTTCCAACTTGGACGACAAGCTCTCCATGTTTATGGAGCTAGTGGATGGGGTCTTCCTTCATAAGATCATGACCCACATAGATCCAAATCCAACAAACCACCGGGTGAACAAGCAGGTGAACAACGACGTAAACCTGAGGATCCAGAACCTCAGCACTGTTATCAGACACATCAAAAACTATTACCAGGAGaatctccagcagctcattttgATGACCTTACCCAATGTGCTGACCATCGCCAAGGATCCTTTGTCAGGAAAGAGTATGGAGGAGATGAAGAggctgctactgctgctcctAGGCTGCGCTGTTCAGtgtgagcGTAAAGAGGAGATCATTGAGAAGATTAAGCTGCTAGACATTGAAACGCAAGCAGCCATCGTCTCCCATATCCAAGAGGTAACCCACAACCAGGAGAATGTTCTGGACCTGCAGTGGCTGGAAGTGGGGGAGCTGCCTGCTGAGGAGCTGGACCCTCTCTCCCGCAACATGGCCTTTCACCTCCGCAAACTCATTGATGAGCGGGATGAGTGCTCAGAGCTGGTCTTGGAGCTGACCCAGGAGAGGGATTATCTGCAATCCCTGCAGCCCCCCAGCCCTGTGAACTTCTCCAGCCCTGAGAGATCCTCCCAGCTCGCTGTGCTTTCAAAAGAAGACCGCCAGCACCTGGCAGTGGAGCTCGCCGATACCAAGGCTAAACTGCGCCGATCTCGACAAGAACTAGAGGAGAAGACGGAGCATTTGATAGACACCAAGAATGAATTAGACAGGCTGGATGTGGAGATGCAGAAGTTGAAGCAAGAGAACACTCAGCTGCTGGCCGAGGCACGGTCAGTTCGAGCATATCGGGATGAAGTGGATGCTCTGAGGGAGCGTGCTGGGAGAGTAGACAGACTCGAGACAGAACTGGCTCGGTTCAAAGAGAAGCTGCACGATGTTCACTTCTACAAGGCCCGCGTGGAGGAGCTCAGAGAGGACAATATGACTCTGCTCGAGACTAAGGCCATGCTGGAGGAGCAGCTGAGCACAGCTAGGGGGCGCTctgacaagctgcatgagctaGAGAAGGAGAACCTCCACCTGCGCTCCAAACTGCACGATATGGAGATTgATCGGGACAGTGATAAGAAGCGTCTAGAGGAGCTGCTGGAAGAGAACATGCTACTGGAGATCTCACAGAAGCAAAGCATGAACGAGTCTGCTCACCTGGGCTgggagctggagcagctttcTAAGAACAATGAGGtcaatgaagCTCGCAAATCGTTTGTGTTTGAGCTGAATGAGTCAGCCTCCAGCCGGTTGCTGAAACTGGAGAAGGAGAATCAGAGCCTGCAGAGCACCATTCAGGAGCTGCGTGAGGCATCACTCAGCTTAGAAGAAGGACAGCTCCATGCCATGGAACTGGAGAGGGAGAACCAGGGCCTCAGCAAGAAGATTGAGCGTCTGCAGACCCAGCTGGATCAGGAGAAGCAGACCACACAGGACATGGAAAGCTTGGGAGAAGAGCTACTCAAGGAAAAgcagaaactggagaaaacccTGGAGACTGTGCAGGCAGATAAAGACAAACAGaTCTCTGAgctggaaaaagaaaaggagcATCTGAACCAGGCAGTCAGTTCCCTGCGGAAGCGAGCTCAGGTGGACAGCGAGGCCCGTGTTCGGGAGGTAGAGACGGAGAACCGTGTCCTCCACCAGACTATCTCTGAGACTGGAGGAAAGCTGGCGCGACTCGAGGCTGAGAAGCGTCAAGCCACCAAGGAGCTGGAGGGTCTTCGGGAGCGTGGAGAGCGCTGTGTGGAGCTGGAGCGAGAGGTGGCGCGACTGGAACGCGGGCGAGAGCAGCTGCAGCGGGAACTGGCTTCTCTCAGGATCGCCAGCGAGCGCACCGAGGCCCTGGAACGCGAGAACGCCACCTTGGAGCAGGACAACCGGCGGCTGAAGAAGCAGGCAGATGCAGCGCAGAACGCTAACGTGCGCCTGGCCACTTTAGAGAAGGACCGTCGGcaactggaggaggagaacctCGAACAGCGACGTGCTCTGGACGGTCTCCGGCCGGCTGCTGCTCGCCTTGCACAGCTACAGCTGGAGCACAGTGAGCTGGAGCGCGAGAGACAGGAACTTCAGGGCACCCTGGAGGAACTCAGAGCCCAGGCCAAGCGCTGCGAGAGGCTGGATCTCAGCTGCAACAGCCTGAGTCAGGAGAACCAGAGACTGCAGAAAAGCCTGGACAGCAGTTCTGCCAAAATCCAGGACCTAGAGGGTCGGCTGCGAGAGTCCGAGAGCCAGAGCAAGGAGGTCCAGAAGGAGCTGGTGGAGGTGAGGCAGGCAGGGAGCCGAGCAGAGGAGGCTGAGAAGCAGAGGAGAAGCATGGAGCAAGAGTTGGGccaggcagagaaagagaggaagcaACTGGAGAAAGAGGCCCACAGGCTGAGGAGGCAGCTGGAGGCGAAGGAGGCAGCGCTGGAGGAAAGCTCGCTCAGGCTCAGCAGCATGGAGAAAGAGGGCACAGCTCTGAACAGGGAGCTTGCACGCCTCAGAGAAGCTGCCGGGAGGGTCAAGGAGCTGGAAAAGGATAACAAAGACCTGCATAAGCAGGTCACCATCGACAAGAGGACCCTGGCCACTCTCCGAGAGGAGCTGGTGAATGAGAAGCTGAGGGTGCAGCAGCAGTGTAACGAGCTGGAGAAGCTCAGTCATGAGCTGGAGAAGATTGGCCTGAACCGGGAGAAGCTGCTGCAGGAAGAGCACAGCTGTGAGGACAAATGGACCAGtaaatataaaattctGGAGACCAAGATCGAGTCAACACTAAAGAAGACTCTGGAACTGAGGGAGGAGAAGATCCAAAGTCTGGAGTCTCGTCTGGAGGAAAGCAGCAGCTTGAACCAGCAGCTACGCACTGATCTCACTACTGTGAAGAAAACACTGGAGGCTCTGAGGCAGAggcaggaggaggaggctgCCCACTCTGAAATATCCCAGAAATCTGTGGAGCAGGGCCGGTGTGGTTCCAGCCAGGAGAAATGGGAGACGGAGCAGAGAGAGGCCACCGCTGAACTCCTCAAACTCAAAGATCGACTGATTGATGTGGAGAAGAATAATGCGGCTCTGCAGACAGAGAAACACCTCCTGAAGGAGCAGTTGAAGCAGCTGGACTCTCAGAACTCGCAGCTAAACGCTCAGACACTGGCTCTGCAGAAACAGGCTGCAACACTGCAGGAGCAGAACACCGCCCTGCACAAAGAGACGGCCAAACTACAGGTGGAGAACTCCACGCTGAGCTCTCAGAATGCATCTCTGCTCTCTCAGTATGGAGCTCTGCAGACTCAACTGCAGACTGCGGAGGCAGAAGCAGAGGCGCAACAGAGGCAGAAGGAGGAGGTGCGGGCAGCCCGGGACAGCGTCACCCACGATCACGAGCGTCTGCTGGCTGTTCACGAGAGACAGGCCGCTGAGTACGAACAGCTCATCTCCCAGCATGCCACACTGAAGAGCAACCAGAGAGCACTGGAACAGGAGCATAAAGCACTGGAGAACAAgtATGTGCTGCTGCTAAAGCAGAAGGATGCTATGGAGGCACTGGAGGCTTCTTtgcagaaagagagggagagtttGGGAGAGGAGATCCGCAAGAACACTCTGATCCTGGAGGAGAACCGAGGCCTGAGAGAGGACATGGACAGgttgtctcacacacactcgcagcTACGGCAGGAGTATGATGGGCTGCAGCATCAGACCAAGGAGCTAAAGACGTCTCTGAACGAGTCTCAGTTGGAGCTGAACCGCTGGCAGGCACGGTTTGACCAGCTGAAGGAGCAGCACCAGGGTCTGGACATCTCAATGACCAAACTGGACAACCACTGTGAGCTGCTGACCCGGCTGAAGGGGAacctggaggaggagaaccACCACCTCCTGAGCCAGATCCAGATGCTGAGCCAGCAGAACCAGACGCTGCTGGAGAGAACCATGGAAAGCAAAGAACTCTACCACGAGGAACAGAAGCAGTAcatTGATAAGCTGAATGCATTACGAAGGCAGAAGGAGAAACTGGAGGAGAAGATCATGGATCAGTACAAGTTCTATGATCCAACTCCTAAAAAGAGGAGTCACTGGGCAGGAGCTAAAGCCATCGCCAAGCTGATCAAGCCCAAGAAGGACACTTCCCGCGAGAGACCAGAAAGCTCCCGAGAGAGAATTCGCAGTGCGCCAGACATCCCTCTGCCAGACATCCCTGTCCTCTTAGACTGCCCTGACAGCAGCCCACCCCTTCCACCCCCTCCACTACCACCCCGCCAGAACCGCCTCAGCCTGGACTCACCAGGAAACCACTCAGTAGAGGAAAACCACGTCCAGTCCCCGGTCTTCTCCCCACCACCCAACAACCGAGGACCAAGTGACAGCAGCATCTCCAGAGGCAGAGAGCTGTACCGACCAGCAGGGGGCAGCAGTGAGAGTGTGAATGGATATGAGGATCTGGCCTTTAGGAGGAGAGCCATTGAACCAGGAGCCTCCTGTTCAACCCCGCTGAACCATAATTCCCACAATGCTCCAGGCTTCACACCCCCAAGCTCACGACCAGGACGCAGGCCTAAAGGATTAATCTCAGAGGAGGACCTGCGCCTGCACTCCCTCGATGCTGGCTTTGGGTCTGGTGGTCATGGAAACGCAGGTCACAGGCCCGGGTCTGCTGATTTCAGCCGCAAcacctccagcagcagctctcCAGTCAACTCCAAAGGCTCTCTGGAGCGTCTGCAGGGCCGTTCAACCAGCCTCTCCAGTGATGATGTGGTTGGGCTCAGTCATGAAGGATCCCGCCTCAGTCAGTCCTCTCTGCTGCCTCGGAGCTCCACCCTGCCCTGTGAAACTCCACCCACTCAGCGCTCCACCCTGCGCCCCTCTCGCATCCGCCCTGCTTCACCTGGCAGTGAGATGGTGACCCTGAAGGAGTTCCTGCAAGAAAGCAATGTGCTCTCACCCCCCACTGTGCAGACAGACAGTCGGGAAGACCTGATGACTGATTATTTCACCAGAGCGAGTCGGCCAGCGCCTCTCAGGGATGGAGCCAAAACCCCTACCAGCTATGTGGTCCCCACGGTCAAAACAAGCTCCTCTGGCGCAGATGGGCGAGCCTCCAAACCAGGACAAAGTGTCAAGCCCAGCATTCGCCCCTTGGAAGCTTCTACCCCCTCTTCTCAGTCTCAGACGCTCCCTAATCGTGGAACTGGGAGCCGCCCCTCGTCCCTGCAGCACTCAGGATCTCGTGGAGGGGCCGGtttaagcagcagcagcttgagCCGCACCTTTAGCCTGGCTTCAGCTGACCTTCTCAACTCAAACGGTCCAGACAGCTACCGAGCTGAGGGGGGATCACCTGGTCAGGCCGAAGGTTTGGTGAGGCGGCCCCGGGACAGGCCACAATCGGCTAGGCCCCTGAGTGGGGATCCTACTCACCTGTCTGTGGATCCCCGGCGCCTTTCCCTGGCTCAGCCAAAAGATGAGCCCCTCCTGTCTGCCTCCCCACAAGCTGACTGGGGCTACGGAAACAGTGTAGGGCGAACAGGAGCAACAGCGAATCGCTCTGGGACATCGCAGGGCCGCTCAACCCACCAACATCACCGTGGGGAGGTGGCTATGGTCACCCCAGTGCGGGCCGTCTCCGCCCTCAGGCTGGAGGAGGTGGAAGAGCATCGAGAGCCCAGGCAGGCTGAGCCCAGCTCTCTTAAGAAGTCGGACTGTGTTGCAGAGGAGCGGCCGATAAGCACTCCAGCCTCCCCAGACCCCAATAATGACCCGCAGACTGTGTGGTATGAGTACGGCTGCGTGTAAGCCCAGGCACTCCTCGTTAGCATGGCTTTTGGCTTTGATGTAGAGGCTCAGGTGGGGAAGGGATGGAGGAAATCCTCCTTTATGTGCCCGGACATCATGATACAATTAGATCAATTAATCTGACCTTTCATGTGGTCAGGAAAAGCCCTCTGGTTTACATGTCCTTGATCTGAGCTTTGAGGAGCAGGGACTAGCACTACAACACTGCAGCCAGCTCTGCCCAAAGTGTATTTGGGGTCAGTGATGGTTGTTGACTTTTGCCTGATAGAACTGCAaagcaaatacatttaaaagccCCCACAAGCACCCGTGAAACTTACTGAAGCAACAAAGCAGAACATGCTTGGCCAGTCTCTGCAAACCCATCCAGTCCTGTGTTCAGGACTCGTACACAGCTTGGTGAAGGAATGTGTTTGGGAATGGACACGGCttaagaatgtatttttttgtttttttcccctctcctcTCATCTCCTCCCCTATCGAACACCATTGATTTCCTGCAGCTCTCTGTGGACAGGCAGGGCCTGCCAGCTCGGTTTCTATTCTGAATGCGCAAATCAAACATTGGGCTTTTGCGTGAGGGACCGCTCCCTGGATAATCACAGAGTAATTACAGTATCCATCTTTAGGAGGCGGAGGGGACAGCGTGAGTCCATCATTCAGGCAGCCACGGTGGGATTGGTTACTGGAAATGGCTACTCGCTTTCGCTCCCTGCTGACAAACCTAGTGCTCAAGCTCCTTTCCGCTGCCACGGGTTACCACCTATTTGCTGAGCGACCGTGCTATTGGCTCTGGGGTATGCAAATGGAAGAGAAGACTCAtgatgatggagagagagagatggaggggaaCAAAAAGAGAGATGAGATGAAGATTTAAGAGAGCAGGACCTAACTGTTGAAGTGATGAATGTTGATACGAAGCAGTAAATTcgcaaactttttgtttttgtttagttttactcCATTTTATGCTCTCAAGGGCATTTATAGTTATAGCTATAGACATGGTGTGTCATCAGGCATTTAACTTTTCAACACTGTGggttctttttatatatatatatgtaaatatgttgaTTGAGCACTATGCCAGCAGGAGAAACAGAGTTTAAACTAAGGTCTAAACTGGAGTCTTAACACTGGACATAATCTCCACAGCTTGACAAGATCAAGTACCAGCCTATTTTCTCATcgggttttatttttattgcaaatGAGTTGGTATCTATTGTACCAGTAACACTGTAAAATTGTTCCAATGTTCAGAAGTACTGGTTTATTTATTACCTCCCAAATAAAGACACACAGAAAATGTGTCAGAATGTGACACCCCCTcaaatattaaattgttttgTGGTTTTGGAGTGTCCACAGTGGTGACTGTTCATTCACGGCACTGTATAATTAATTTATGCAGATTTTCCCCAAGTGGTTCCCCTGATATGTTTAACAAAACATTAGTCCATTAGTCCTTTTTTAGCAGTGGTGCTCTTCCTCATTAACATTGCCATAATGTGAAGGCTCCAGTGGAAAAGAGATGGAGGAATTTCTTCCGTGCCTAGACATCATGCAATTAGCTTAATTAGTCTGACCTTTCATGTGACGAGGAAAAAGCCCTCTGGTGTACTTGTTTATCAGGGCTTTAAGGAATGGTCACGTCCACCAAAGCAGTTAGTTAAGGTGAGGTTATTAGTAAGTTCACTAAGTTCTTTACGTCTTCCTCAGCAGACCCGTGAGAGTGCACTTATTGTAATGGGGGCTTCACTCAAACATGGCTACCCAGTTACACAACGTATACCCAACAATAACATGCGCAATTTTCaaacactactacaacaaaGACTTGATTGTTGACGTGTGATGTTTTGATTAGTCGCCTAATAAGACGTGTGATGGCTGTGATTGGTTCTAGTGTTTGTCATTTTGTATAGCAGAAGCTGTTGTCCAAAAACTGAACTCTTTGTAATAAAAACTTTCCAAATTTA

Function

symbol description
ccdc88c Enables guanyl-nucleotide exchange factor activity. Involved in neural tube formation and small GTPase mediated signal transduction. Predicted to be located in cell junction. Predicted to be active in centrosome and cytoplasm. Human ortholog(s) of this gene implicated in hydrocephalus and spinocerebellar ataxia type 40. Orthologous to human CCDC88C (coiled-coil domain containing 88C).

NR:

description
PREDICTED: protein Daple isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007252545.3 False 8469 mRNA 0.53 30 21194709 21279138
XM_022672922.1 True 8479 mRNA 0.53 31 21194708 21279138

Neighbor

gene id symbol gene type direction distance location
LOC103047712 sptb,LOC108425666,LOC107582900,LOC107662651,LOC107730205,LOC107602260,LOC108270244 coding upstream 5440 21141773 ~ 21189268 (+)
stard9 LOC108270056,LOC107582944 coding upstream 57801 21081464 ~ 21136907 (+)
cdan1 cdan1,LOC107582945 coding upstream 115086 21060695 ~ 21079622 (+)
mbip NA coding upstream 235317 20941708 ~ 20959391 (+)
LOC103043023 nkx2-1,nkx2.1,LOC107578306,LOC107582966,LOC107679765,LOC107666245 coding upstream 269040 20921537 ~ 20925668 (+)
gpr68 LOC108425668 coding downstream 3465 21282603 ~ 21296256 (+)
tmem87a tmem87a coding downstream 635088 21914226 ~ 21926373 (+)
vps39 vps39 coding downstream 648428 21927566 ~ 21948191 (+)
galnt16 galnt16,LOC107707671 coding downstream 676870 21956008 ~ 21994947 (+)
numb numb coding downstream 721475 22000613 ~ 22046430 (+)
G82091 NA non-coding upstream 168904 21024135 ~ 21025804 (+)
G82090 NA non-coding upstream 170850 21023004 ~ 21023858 (+)
G82088 NA non-coding upstream 172136 21022070 ~ 21022572 (+)
G82089 NA non-coding upstream 174846 21019092 ~ 21019862 (+)
G82073 NA non-coding upstream 246266 20947596 ~ 20948442 (+)
G82193 NA non-coding downstream 112024 21391162 ~ 21420420 (+)
G82194 NA non-coding downstream 119548 21398686 ~ 21399884 (+)
G82234 NA non-coding downstream 208874 21488012 ~ 21488214 (+)
LOC111193214 NA non-coding downstream 212563 21491701 ~ 21506791 (+)
G82258 NA non-coding downstream 278279 21557417 ~ 21557995 (+)
G81763 NA other upstream 1521070 19673127 ~ 19673638 (+)
G81761 NA other upstream 1528661 19665736 ~ 19666047 (+)
G81704 NA other upstream 2263954 18930238 ~ 18930754 (+)
LOC103033848 LOC108435752 other upstream 2673761 18511622 ~ 18520947 (+)
LOC103035760 rtkn2,rtkn2a other upstream 2725073 18460123 ~ 18469635 (+)
ralgapa2 ralgapa2,LOC107687934 other downstream 241769 21520907 ~ 21673438 (+)
G82488 NA other downstream 1078506 22357644 ~ 22358135 (+)
G82609 baz1a other downstream 1951292 23230430 ~ 23231318 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other downstream 2596301 23875439 ~ 23877770 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 2630544 23909682 ~ 23973975 (+)

Expression


Co-expression Network