akap6 (akap6)



Basic Information


Item Value
gene id akap6
gene name akap6
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 22711082 ~ 22844378 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>XM_007253777.3
TCTGAATTCAGCATGGCCAGTCCATCACTCCATAGTTTCCAAGGCAACAGGGCTGCTCTTCTGAAAGGCGCTGCATCATCAGCATCCGCCAGGCCAGCGCTGCTAGAGGCAGGCAGCCCCGCAGTGTCTCAGAGCAGGCACCTCCCCCACATTGCACCCTTTACTGACGCCCTGCGCGCAAGATGGAGTAGAGGTGGGACAGGcTGTTCCAGAAGGCCCTATCACGAGGATCTTATAGTGCTTTTTCACCATGAGCATCGCAGTGTCACCGGTGGCCAGTGAGGCTGCCTCCCCCATGATCACCTCCGTCACACCTACCCTGGAGTCTGTCCCTAAGGAGGAGCAGCCAGGCCCCTGTGGGTCCAGCAGCATCATGGACGGTGTAGGTCAGGCCCGGGACCCCTGTAGGAGTTATCAGAAGCCCCCTCCTCTGCACACGGGAGCCGATTGGAAGGTGGTGCTCCACCTGCCAGAGATAGAGACCTGGCTGAGAGCCACAGCAGAGAGGGTGAGAGATCTCACTCACTCCGTCCAGCAGGACAGCCTCAACAGGCATGTGGATGTTCACCTGGTGCAGCTAAAGGACATCTGTGAGGACATATCAGATCATGTGGAGCAGATCCACGCTCTGCTGGAGACTGAGTTCTCCCTGAAGCTGCTGTCCTATTCGGTCAACATCATCGTGGACATCCGCAGCGTGCAGCTGCTGTGGCACCAGCTCCGCGTCTCCGTGCTGGTTCTGAAGGAGAGACTCCTCCAGGGCCTGCAGGACTCCAACGGCAACTACACCCGCCAGACTGACATATTGCAGGCCTTCAGCCAGGACCACGATCAgGCCCGACTGGATGCGTTGACAGAGGTGGATGACTCGGGTCAGCTGACCATTAAATGCAGCCAGGACTACTTTTCCTTGGACTGTGGCATCACTGCTTACGAGCTGAGTGACTACAGCCCACACGAGGAGGACATAGAGGGCCGGGTTTCAGGCCAAGAGACACGCTCCCTTTACCCTGAGCTGGAGCGAGACTTTCCTGAGCTGCTCCAGAGCGTAGATCTCCTGACCATTGCTGCCTCCAGACAGAGCCAAGAACCACCACCAGAATCCACCGAGGGTACCCAAAGTGGGCCCGGGGACCAGTCACCATCCACAGGCGATTCTATGCAGGGTAGCACCTTTCAGGGAGAGAACGGCCTTGGCTTGTCCAAGCGACCGCTTCAGGGCTCCCACAGTAGCAAAGTATCTCCAACACAGCCCTCAATGCCCAAAAAGCCCATGTACATGGAGGCAAGCCTCAGCAGACCCTCTTCTCTGCAGTACCAGGCTGACATTAGCAGAAGCACACCTTCTCTCCTGGACCTGCCTGATCGTTCCAAGTTCTGGCTGGAGCTAGAGACAGTCTATCCCAGCAATGGGAGTCAATCTGATGAGAACCTCCATATGATGAACGGTAAAAATCGTCAGACAAATCGCCAAGCAACTTTTCAGAAGCATATAACCATTGGTAGGGCCCTGATTCCCCTTCAGAGAAGCTCATCTGAATCGAGGCCGGAATATAGCACTGAGACTACTAACCTGCATTTAAGCCCAAAGAACAAGCCCTCAAATAATAAGTCCAACAGTGACTTCTCCAGTCTTCCATCTTCATCAGGGGAGGACACCTCAGACCATGACCCTCATGAAAGCTCCTCCAGCCCAGACAATCACGCAGGTACCACAGGTTGTCTGTGGATCATGCCTCATGCACCCCAACCAGCCAATAGTAGCCCTAAAGATGATTGTTGGTATGGTTCAGAGGAGTTCCTGGCCCTTCCTGCTCAGCTAAGGAAAACTGAAATGCTGGCACTGAAGCTGGAGAGCCTTGCACAGGCCTTACCCCCGAGAGCTCTCCAGCAACCCATCCAGGATGTAGACGACTGGGAGCTGACTGAGGCCAACCCAGAATGGGAGAGCGGCCTCCATCTTCTTCCCCCACAGTCCTACAAGAAGCAGTTCACAGGACGATGTTTCTCGTCCTCCTCCAGTGACGTCGCCCCCTCTGTAGATGAAAGCATTGAGTCTGGGCCCCTCAGTGATCTGATATCTGAGGATGAGGGTGGCTGGAGCAGGCCTGAGTCCCGGAGAACTGAGAGGAATGCCTTACAGCCCAAAGTCTCTCAGATGGTGTTCCAGTGTACACCTCTGATCCAGCAGCTACTGCAGGACATCCAGCACCAAGAGAACTACCAGGACATCTGGGGAAAGATAGAGGGGTTCGTCTCTAAGCTGGATGAGTTTATCTGCTGGCTGAGAGAAGCGCTGGAGACCACTGAGAACTGGACTCCACCCAGAGCCGATACTGACAGCCTCCGACTCTACCTGGAAACACACCTTagCTTCAAGCTGAACGTGGACAGTCACAGCGCTCTGAAAGACAGTGTGCTGGAGGAGGGGAGGCAGCTGCTGGAACTCATCACCTCCCACAAATCAGGTCTCCAGGACATGCTCCAGATGATCGCGCACCAGTGGCaggagctgcagaggcagaTCCGCCGGCAGCACAGCTGGATGCTGCGAACTCTGGACACCATCAAAGCCCGTATTGTGGCCAGCGAGGGTTCTCCAGACCCCGAGGACCCTGTGGACCTCGGTCCCCATGCCAGCCCCAAGtcACAGGTGCAGCAGTGTCATGCAGAGGCCCAGAGGGATATTGTGGATCAGATGAGTTTAAAGCTCAGGAGTCAGCAGtactccagctccagcaggaACAGAGACTTCTCCCTTATGTCCAAGTTCAACAGCCTATCGGAGTTCCAGACCGAGTACCAGGAGCTCTGGGATTGGCTGATGGACATGGAATCCATTGTGACGGACAGCCACGAACTGATGATGTCAGAGGAGCAGCAGCACCATCTCTATAAGGGGAACAGTGTAGAGATGGCCATGTGGCTCCCGAAGAAGACGCAGCTCCTGGGCTGGGCGGAGAGTCTGAAGAGGAGCAGCACAGAGCTGCCTGCTGACTTTGAGGAGTGCCTCACTGCACTCAGGGCCAAGTGGAATCAGCTAGAGAAGACCCTGGGGGAGCATGTGGAGGTGCGAGCGGGTGATCCAGGTTCTCGCAGGCTGCTCTCTCCAGGCACCAGCAGCATGGTGGCTCAGCTGGAGAGTAAGATCAAGGAGCTGAAGAGCTGGCTGAGGGACACCGAGCTCTTCATCTTTAACCTCAGCCTCCGAGCAGACGCGCAACATCAGAACCACACACAACAAGACCCCCAGCCAAACTCGCAACACGACCCGCGAGAAGACCCACAGCTGGACCCAGAAGTTGCCAAGCAGCTGGAGCACTTCAAGGCTCTGTGTGTGGAGGTGCGAGGCAGGAGGAAGGGTATAGCCTCTGTGCTGCGGCTGTGTCAGCGCCTGCTGGAGGGGCCGGAGGAGCAGAGCTCTGAAGCCGAGCGCCAGTCTCTGCAGCTTCTGCAGGTGAACCTGGAGAGGCGCTGGGAGGCCATCATCATGCAGGTGCTCCAGTGGCAGAGCCGCCTCAAACGTACCCTGGGCAGAGAACAGGTCCCTGGCAACCTGATTGAACCATCGCTTATGGATCTTCGTGGCCAAACAGAAGACTCTTGGGAATGGGATGAAATGGACATGACTATAGATAATATGGAGTCGCAGGAATGTGACATCCCTTCAGAAATGCCGCTCCATTCTGTTGGGGAGCTTTTAAATGTGACTGAGTCATGTCCCACACAGCCCACAACAAGCCTGAGCACCTTAGAGACAAATCCAATGTCTTCCCAAGTTTATCAGGTGTATAATCTACATCACGTGGAGTTATACCAACAGCCGCAGTACAATCATAAGAGTTCTCCAAATACCACCAAAACCAAAGGGAAGCAGCCTCTGCTGAAGAGCCTAAGCAAGGATTCCTCTTTTTCCTCAGTGGAGTCGTTGCCTGATATTTTAGGAGGGCTACTGAGTGGGAAACAGGGGTTACTAACGGATTTAGCTAGGAGATCAGAAAGTGAGAGTGGGATAGTCAGTGAGGGAGACACTGAGACCACAGCCAATTCTGAGATCTGTCTGCTTTATCAGTGTGAAGATCAAAAAATCACTCCCCCTATTCAATCGGAATCACCTTGTATAGATCAATTGTCAGATGAAGACATAGACAGGATCCTTCAGCGTGCCAACAAATGTGCAGAGCTCGGAGACAGTCTGGCAGAGGAGACGAAGAACCAAAGATTTTGTATGGTGAGGAGGAAGAAAGAAGAGTCTGGAGAAAGCAGGAGAAAACACAGAAAGGAACCAGTTGAGATCCTCATTAATGGACGCTGTGTCAGTCCTGAGTCTGAAGACTGTGACACTGGAGCTTTCAGTGCTGGAGCTGATGACAAAGGAAGAGTCCGAAAGGAGCATTCTCAGTTGTCTCAAGGGTCTTCTCTGGACTCCTTGTATGCTGTGGGAGAATTATTTCCATCGGCCAAAGAGACACTCACACGCAGCACATCTCTTGAGAGCTGGCTGGCTCCGTGTAAGGCTTCAGAGGAAGTGGGCAGTCAGGGAAGTCTGAGGGACATCGGCCTGGCCCCAGAGCCCACTGGGGAGCTGAGCAGGAGAACTCTGGAGTTGCTCAAACGACTTGAAAACATCCGGACCCCTCTTGCCCAGAAGATGACCCGCAGTGTTTCTGACGTCACCCTTCAGAGCAGCTCTCTTCGTCTACCCTGTCGAGGGCAACGTTCAGGGGGCCCCGCATCTTCTGCCAACGAGAGCTTAGCAGCTTCTCTAACAGAGCTGAGCAGCGTAGAGGACTCATCAGTGGCATCTGAAGATCTGGCTGTACAGAAGAACCGCCATGTTGCCGTCAATTCCAACAATTCCTTCAAGAAGCACTGCCGTAACCAGCAACTGACGGATGAGACAGATGCCAGCATCAGCATGGTGGTCAATGTGTCTTGCACCTCAGCTTGCACTGATGATGAAGATGACAGTGATCTGCTTTCCAGTTCCACTCTGACCCTACCAGAGGAAGAGCTGGGCATCAAGGATGACGAAGACTCTAGCATTACCTCTGAGGAAGAGTACATTGAAGGCTCTTTTGCACTGGGGCTGGACTACATGAAGGGAGAGTTTCAGAGCTGGATTAAGCACAGATCACAGAACAAGGAAAAGAATGAGGCAGATCTTGGTGATGAGTTGCGATGTGGAACCCTGTCCAGAGAGATTCTTTCCCCTGTGAGGACCACAACAGATCGCCAATTCTTGAATCGAGCTGCTCTAAAGCTCTTAGAGGCAAACACAAATGCAAGGAATGACAGCCTCAAACAGGAGGAAGCGGACAGCAGTCGCAGGGATGCTACCAGAAGTTACATCAGCCGCTTTGTGGATGACATGGAAAATGGGAACGTGGACAGCTCCCACATCAAAGGGAAAGACGAGGACGACGAGCTCCTTAGAGAAGAAGGGACTCTGTTCACTAAGAAAGGAGAGTCATGTAAGGACTGCCGTACTGTGAATGCGTTAAACGGTGATATAACGGCTACGGGAACTGCCGCCTCACCTGCCTCGTGTGAGCAACTGAACCCACAGTCCAAAGAGTCTTCTCTTGAGGGACAGCTGAAAGGTGAGCTGCCATGCCACAGCTCCCGTCGCCCGTCTCCATCTCTGTCTCCAATGGATGAGTGCTCAGGGTCCCACCATAACATACTGGGAGCCGCTCACTTGAGCTCACAGGAGCGGCTGGCATCCTTTCTGAACGACGTCCGAAATCACTCAGAGAGCTTGTCAGGCTGCTGTAGACACCCGTCCTTCCCTGCTGAAGAGGAGAACAGTGAGAACGTTCACAGCTTTGTGATGGAGATCATCGACATGGCATCGGTGGCAAAGAAAACGAAAGATGCACAAACAGAGCACCCTCAGGAAGCCTCCAGCCCAACCTCGGTTTCTCAGATCAGAGAGAAAGTTCTCGAACACTCGCATCGGCACATCCATTTACGCAAGGGGGACTTCTACAACTACCTGTCACTTTCTTCCCATGACAGTGACTGTGGAGAAGTCAGTACCTGCACAGAAGACAAGAGCAGCACGCCAGTCCTCTCCAGAACCCCAGAAATCCGCGACGAAGAGCCTCTGTTCGAGGCTTGCACGGAAGAAGTCTACCTAGGCCCTCCTCTCTGCTACAGCATGTCCATTAGCAAATGGCCCATGAGACGCAGCACCAAACTAATAGACCCCTTATGTCCCCTGAGCCAAGCACCTCCACTGGCCTGTGATGAATACCAAAAAGCGCATAGTATTTCTCCAGGTAGTATAGCTGGGAGCCAGCCGCAGTGCCATAATGAGGCTCCTTATCTTAATCCTTTACCATGTGAAACCCTGATAGACACTGTTGAATGTTTTGCAGATACTAAAATGCTTGAATCCAATATTTCCCCTGTAATGACTAAGATAAGTGTCTCTTGCTCCAGTACAAATCCTTTAAAAGAGGAAGGCGGCCTATATATTAATCCCAAAATTAACTGTCCCCCGATAAGAAAGAGTGATAGGGATGAAAGAGGTGCTGCTTCACAGTGGATGAAACAGAAGAATGTCAAAAAAGGGCGCAGCTCTCCTCAGGAAGCCAAGTCAACTCATAAACAGtTGCCAAGGTCAGAGGGTGGTGTGGGGCTGCCGGAGACAGGCCGCAGGGCTTCGTTCAGCACTCGCCGTTCAGACAGCTCATCTGCAGTGAGGAGTGGAGTGAGCAGCAGGCCCCAGGCCAGGGTTCCTACTaAATTTGCACAGACTCTTGCCAGCCATGGATCTAAGGCCTAAATGGAGAGTTTATGTCACTGTGTTCTTATTCCATGTTCTGGAATCCTTCTTTGATTCTGGTGCATGGACTCCTTTTCTGGCACTGAATGGTTTTCtggccctcctcctcctcctcctcctccttttgcTCTAGCACCCACTTCTGACTTGGTGCGACCTTGACCTTGGTGTTACTTCCTCACTGCTCGTCCTGGAACCCAGAACGGAGGAGCTACCTCGCTGGTCTTCCACCCTGACACTCCTGACCCTCACTACCAAACCCTATTATAAACACGCAGCAGTCGCCGGTAGCTCTCAATAGCTCATATCAGCCAATGGCTGCAGGTATATCAGCGCAAGTCACAGGTATCTCTCATTTGCAGCTTTTGCAGAGTGGAAGTAAGGTGCAGCACATAGTAGAGGCACAACTTGTACGTGTGAGTAGGCCATAGCCGTGTGGCATGACGATGTCTCAGTTGGTCTGGAGAGCAGCTTCCTCCAGCTTCACTCAGCTCCACTCTTCCTGCGTGTGTGTACGATGCTTTTGCACAGGTGGAAGCCTGGACCCATGGACTGTTAAAACGATGCGTGATGGAGTACAGCTGTCTATGCAACCCAGCAGCGGTGTGAGGTTGTGTGGGATGGGATTCGCGCCAGTTAAAGAGTAAATGGGATGCTGTTcactactgtttttttctgatttctttgtttatttgtttttttttaatcctcaaGATTTGGAGAAACAAAGAGgtgttttaaactttaaagaGTTTTGTGCCTTGCAGTTATTTCTTATAACTTTTGTTAAAACACTGCTTTTTTCCATGTCGCGTGTTCAGTAATTGTTGAGAACGTGGACTTAACAAGCAAGGTTTGAGACTAATGAATGGGgcatctgtatatatgtatactgtACGTGCAAATCTTGGTGTAGACCGATGGTATAAATGCTTGTGTTAGTGTAcaactgtgtgtgttctgtgatgTGAATAATTATAAGCCTTAAAGTGCTAGAATGCATGGTTAACTGTATACAAGCTCTTcagaaataaacataatttattgaA

Function


symbol description
akap6 Human ortholog(s) of this gene implicated in anorexia nervosa and ovary epithelial cancer. Orthologous to human AKAP6 (A-kinase anchoring protein 6).

NR:

description
PREDICTED: A-kinase anchor protein 6-like

GO: NA

KEGG:

id description
K16523 AKAP6; A-kinase anchor protein 6

RNA


RNA id representative length rna type GC content exon number start site end site
XM_007253777.3 True 7842 mRNA 0.52 16 22711082 22844378

Neighbor


gene id symbol gene type direction distance location
LOC103036290 psmc1,LOC108443803 coding upstream 18922 22686731 ~ 22692160 (+)
tonsl tonsl coding upstream 47955 22638733 ~ 22663127 (+)
edrf1 edrf1,LOC107729289 coding upstream 73289 22627304 ~ 22637793 (+)
LOC103037751 arf6,arf6a,arf6.2,ARF6,LOC105893149,LOC106608083 coding upstream 116725 22591569 ~ 22594357 (+)
tmem179 tmem179,LOC107679825,LOC107569011,LOC107732500,LOC107602274,LOC100537383 coding upstream 575785 22130946 ~ 22135297 (+)
npas3 npas3 coding downstream 13466 22857844 ~ 23154585 (+)
srp54 srp54,LOC107729255,LOC107693187,LOC107733904 coding downstream 397793 23242171 ~ 23248849 (+)
sec23a sec23a,LOC107689296,LOC107589610 coding downstream 406282 23250660 ~ 23267862 (+)
clec14a NA coding downstream 464667 23309045 ~ 23312366 (+)
foxa1 foxa1,LOC106611236 coding downstream 521053 23365431 ~ 23368635 (+)
G82515 NA non-coding upstream 159293 22549865 ~ 22551789 (+)
LOC111193141 NA non-coding upstream 302047 22393995 ~ 22409035 (+)
G82493 NA non-coding upstream 342126 22366240 ~ 22368956 (+)
G82487 NA non-coding upstream 354996 22355641 ~ 22356086 (+)
G82476 NA non-coding upstream 425741 22285063 ~ 22285341 (+)
G82579 eapp,LOC107733856,LOC107729290 non-coding downstream 283575 23127953 ~ 23194290 (+)
G82583 NA non-coding downstream 319635 23164013 ~ 23165063 (+)
G82588 NA non-coding downstream 360437 23204815 ~ 23205444 (+)
G82596 NA non-coding downstream 364117 23208495 ~ 23208799 (+)
G82606 NA non-coding downstream 381387 23225765 ~ 23226910 (+)
G82488 NA other upstream 352947 22357644 ~ 22358135 (+)
ralgapa2 ralgapa2,LOC107687934 other upstream 1037644 21520907 ~ 21673438 (+)
G81763 NA other upstream 3037444 19673127 ~ 19673638 (+)
G81761 NA other upstream 3045035 19665736 ~ 19666047 (+)
G81704 NA other upstream 3780328 18930238 ~ 18930754 (+)
G82609 baz1a other downstream 386052 23230430 ~ 23231318 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other downstream 1031061 23875439 ~ 23877770 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 1065304 23909682 ~ 23973975 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other downstream 1295011 24139389 ~ 24142232 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 2051516 24895894 ~ 24924815 (+)

Expression



Co-expression Network