Item | Value |
---|---|
gene id | exd2 |
gene name | exd2 |
gene type | coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035905.1 |
NCBI id | CM008308.1 |
chromosome length | 42966623 |
location | 22047614 ~ 22055411 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
symbol | description |
---|---|
exd2 | Predicted to enable 3'-5' exonuclease activity. Predicted to act upstream of or within nucleobase-containing compound metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and nucleus. Orthologous to human EXD2 (exonuclease 3'-5' domain containing 2). |
description |
---|
exonuclease 3'-5' domain-containing protein 2 |
id | description |
---|---|
K20777 | EXD2; exonuclease 3'-5' domain-containing protein 2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_007253811.3 | True | 3407 | mRNA | 0.47 | 9 | 22047619 | 22055411 |
XM_007253812.3 | False | 3397 | mRNA | 0.47 | 9 | 22047614 | 22055411 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
numb | numb | coding | upstream | 1184 | 22000613 ~ 22046430 (+) |
galnt16 | galnt16,LOC107707671 | coding | upstream | 52667 | 21956008 ~ 21994947 (+) |
vps39 | vps39 | coding | upstream | 99423 | 21927566 ~ 21948191 (+) |
tmem87a | tmem87a | coding | upstream | 121241 | 21914226 ~ 21926373 (+) |
gpr68 | LOC108425668 | coding | upstream | 751358 | 21282603 ~ 21296256 (+) |
ubr1 | ubr1 | coding | downstream | 26276 | 22081687 ~ 22103651 (+) |
LOC103041179 | NA | coding | downstream | 55703 | 22111114 ~ 22128141 (+) |
tmem179 | tmem179,LOC107679825,LOC107569011,LOC107732500,LOC107602274,LOC100537383 | coding | downstream | 75535 | 22130946 ~ 22135297 (+) |
LOC103037751 | arf6,arf6a,arf6.2,ARF6,LOC105893149,LOC106608083 | coding | downstream | 536158 | 22591569 ~ 22594357 (+) |
edrf1 | edrf1,LOC107729289 | coding | downstream | 571893 | 22627304 ~ 22637793 (+) |
G82336 | tmem30a,LOC107581488,LOC107714749,LOC107571817,LOC104951461,LOC107687843,LOC107721815 | non-coding | upstream | 166612 | 21880537 ~ 21881002 (+) |
G82349 | LOC108428626,LOC106610771,LOC105015763,LOC107687947 | non-coding | upstream | 168873 | 21878055 ~ 21878741 (+) |
G82345 | NA | non-coding | upstream | 177720 | 21868379 ~ 21869894 (+) |
G82311 | NA | non-coding | upstream | 258674 | 21787174 ~ 21788940 (+) |
G82270 | NA | non-coding | upstream | 326236 | 21720629 ~ 21721378 (+) |
G82383 | erh,ERH | non-coding | downstream | 19131 | 22074542 ~ 22079050 (+) |
G82438 | NA | non-coding | downstream | 83085 | 22138496 ~ 22141716 (+) |
G82465 | NA | non-coding | downstream | 179092 | 22234503 ~ 22234891 (+) |
G82476 | NA | non-coding | downstream | 229652 | 22285063 ~ 22285341 (+) |
G82487 | NA | non-coding | downstream | 300230 | 22355641 ~ 22356086 (+) |
ralgapa2 | ralgapa2,LOC107687934 | other | upstream | 374176 | 21520907 ~ 21673438 (+) |
G81763 | NA | other | upstream | 2373976 | 19673127 ~ 19673638 (+) |
G81761 | NA | other | upstream | 2381567 | 19665736 ~ 19666047 (+) |
G81704 | NA | other | upstream | 3116860 | 18930238 ~ 18930754 (+) |
LOC103033848 | LOC108435752 | other | upstream | 3526667 | 18511622 ~ 18520947 (+) |
G82488 | NA | other | downstream | 302233 | 22357644 ~ 22358135 (+) |
G82609 | baz1a | other | downstream | 1175019 | 23230430 ~ 23231318 (+) |
timm9 | timm9,LOC107729247,LOC107693171,LOC107689314 | other | downstream | 1820028 | 23875439 ~ 23877770 (+) |
G82811 | psma3,LOC107729246,LOC107725600 | other | downstream | 1854271 | 23909682 ~ 23973975 (+) |
G82853 | tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 | other | downstream | 2083978 | 24139389 ~ 24142232 (+) |