adprhl2 (adprhl2,LOC107697751,LOC107674064,LOC107594801,LOC107719508)


Basic Information

Item Value
gene id adprhl2
gene name adprhl2,LOC107697751,LOC107674064,LOC107594801,LOC107719508
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 661539 ~ 666304 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007255077.3
CAATGACAGCCCAGTCCCGGTAGGAAGAGAATCACAGATGTCACGGCGGACCCGCGGTTCTGCTGTGTGAGTCAGGGCTGGAAAAGACCCAGACTCGCGGTGTTTATTACAGCGGGCAGCCCGAGGATGTCGGCCGCGGCTCGGTTAGCTGCAGTCGGCGGGCCGGTGTCGACCCTGTCGCGGTTCCGCGGCGCGCTGGTGGCGGCTGTAGTGGGGGATTGTATCGGGGGAGAGTTTGAAGGAGCGGAGGATGTTCCTCTGGACCGGGTCCTGCAGCACCTCAGCGGGGTGGAGGACGAGTCCCGGGGGGACGgtATACTACAGTACAGTGATGATACGGCTATGATGCGCTGTGTGGCTGATTCACTGCTGACCCGGGTGGGGTTTGATGAGCAGGACATGGCTCGCAGTTTTGCGAAGGAGTACAGTCTCGCCCCGGGCCGGGGCTATGGGTCAGGGGTCATTCAGGTGTTGCGGAAGCTCGCGTCTCCTCAGCTCAGCGACGTGTTTCAGCCGGCTCGGGCTCAGTTCGGAGGACGTGGATCATTTGGGAATGGTGGAGCAATGAGAGTGGCACCTTTCGCCCTCGCCTTCAGAAGCGCAGCTGAAGTGCGGAAATACTCCAGGCTCGGTGCGATGCTCACACACTCCTGCTCTTTGGGCTACAACGGCGCCGTGCTGCAGGGTCTCGCTGTCCACCTGTCTCTGCAGGGCGCCCTGTCCCTGCCACAGGAATTCATCAACAGACTCATCTCTGAGATGGAGGTCGTGGAAAAAGAGGATTCGGCCCAGCGTGACGCTAAAGCgCTGAATTTAGCAGAGTTTCCGTACTGCACACGATTACACCGAGTGAAGGAGCTGATAGAGAGGAGCAGCGTGAGCGTTGAAGAGGTCATATCCGAACTTGGAAATGGCATTGCAGCACTGCAGTCAGTCCCCACAGCTATCTTCTGCGTTCTGCACTGTCTGGAGCCTCGGGAGGGCCTGCCCGAGCGCTACGGTGGCCTGGAGAGGACAATAGCCTACAGCTTGGCCCTGGGAGGAGACACCGACACCATCGCCTGCATGGCGGGCGCCATCGCCGGGGCACACTACGGCATCGAGGCGGTTCCCCGGAGCTGGCAGATGAGCTGCGAGGGGGTGGAGGAGGCCGATCACCTGGCGAAGCGCCTTTATAAACTGTACCAGTCCCAGTCCTCAGGAGACGCAGTTACCATGAGCGACAGCAACCAGCCCCAATCACACGCCAGCAACCAgcaccccacacacaccaacTGACCCCCCGTCAGAGATCCGGCACAGAGGGTCTCCCTCTCTCATAAAGCTCAATCATCGTGGATTATGATTATGTCTCTGTTGTTTAAAAAGGTTtacaataaaagaataaaagcacTTCCAGTGGTAAACTGGCAAACTG

Function

symbol description
adprhl2 poly(ADP-ribose) glycohydrolase ARH3

NR:

description
PREDICTED: poly(ADP-ribose) glycohydrolase ARH3 isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0046872 metal ion binding molecular_function
GO:0004649 poly(ADP-ribose) glycohydrolase activity molecular_function

KEGG:

id description
K11687 ADPRHL2; poly(ADP-ribose) glycohydrolase ARH3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007255077.3 True 1417 mRNA 0.59 6 661539 666304

Neighbor

gene id symbol gene type direction distance location
LOC103041189 si:dkey-13p1.4,LOC103041189,LOC108436737,LOC107697687,LOC107674053,LOC107733120,LOC107719509,LOC108269552 coding upstream 9850 646899 ~ 651689 (+)
itpka itpka coding upstream 165871 470513 ~ 495668 (+)
LOC103044274 LOC108425589,LOC108269650,LOC107697665,LOC107719518,LOC107563387 coding upstream 292536 359136 ~ 369003 (+)
ccdc32 cunh15orf57,LOC103043985 coding upstream 306559 352153 ~ 354980 (+)
disp2 disp2 coding upstream 323592 321307 ~ 337947 (+)
cinp NA coding downstream 901 667205 ~ 671575 (+)
nubpl nubpl,LOC107719449,LOC107697759,LOC107561549,LOC107733195,LOC107674123 coding downstream 87935 754239 ~ 761723 (+)
arhgap5 arhgap5,LOC107594795,LOC107733129,LOC107719447,LOC107561551 coding downstream 109820 776124 ~ 814690 (+)
eef1akmt2 mettl10 coding downstream 168673 834977 ~ 838153 (+)
LOC103042422 LOC107594852 coding downstream 349529 1015833 ~ 1033566 (+)
G77163 NA non-coding upstream 1337 657916 ~ 660202 (+)
G77148 NA non-coding upstream 40244 614011 ~ 621295 (+)
G77137 NA non-coding upstream 94884 566365 ~ 566655 (+)
G77135 NA non-coding upstream 100368 560903 ~ 561171 (+)
G77060 NA non-coding upstream 126935 522310 ~ 534604 (+)
G77166 NA non-coding downstream 8572 674876 ~ 677225 (+)
G77174 NA non-coding downstream 32618 698922 ~ 760923 (+)
G77191 NA non-coding downstream 94110 760414 ~ 777173 (+)
G77181 NA non-coding downstream 119935 786239 ~ 894659 (+)
G77200 NA non-coding downstream 236734 903038 ~ 903239 (+)
G77154 NA other upstream 29167 631714 ~ 632372 (+)
G77059 NA other upstream 140949 519633 ~ 520590 (+)
ldah ldah other upstream 528236 84719 ~ 133303 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other downstream 216993 883297 ~ 935678 (+)
G77212 NA other downstream 338825 1005129 ~ 1008842 (+)
G77410 NA other downstream 818366 1484670 ~ 1485050 (+)
c9h15orf52 NA other downstream 862666 1528970 ~ 1563180 (+)
G77471 bub1b other downstream 1027052 1693356 ~ 1696981 (+)

Expression


Co-expression Network