flvcr2 (flvcr2,LOC106525280,LOC106571030,LOC108242486,LOC104964435)


Basic Information

Item Value
gene id flvcr2
gene name flvcr2,LOC106525280,LOC106571030,LOC108242486,LOC104964435
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 28152935 ~ 28177704 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257349.3
GTTTGAGCGTCTGATGAATGAAGCGGTTGAGTGGAAGTCGGTCAGTTCACCGctgtttaatttcatttcagcttcttctgcactgttTCCAGTCTTTCACTGACTTCACAACTTTATTACAGCCATAAATCATCAGACACTTCACCACAAACAAGTGTGAAAATGAGCGCCTGCGAGAACTCTGAAGATCTGAAAGGACAGACAAACGGACCAGCGCTCGTGAAGAGCAACATCTCCACCAGTGAACCCGCAGCTGAGCAGATAGAGTGCAAGGTCTTTTCTCCCGAGGCTCCTCAAGAGTGCACCACCCGTCTGTATAAGAGAAGATGGGCCATAGTGTTCCTCTTCAGCTCCTACTCCCTGTGCAACGCCTTCCAGTGGATCCAGTATGGCATCATCAACAACATCTTCATGCACTTCTACAGTGTCAGCTCATTTGCTATAGACTGGATGTCCATGATCTACATGCTGACCTACATTCCCTTCATATTCCCTGTGACCTGGCTCCTGGATAAGAAGGGGCTGAGGGTCGTGGCTCTGGTGGCCAGCTCCATCAACTGCCTGGGGACCTGGATCAAGGTGGCCAGTGTAAAGCCTCACCTGTTCTGGGTGACCATGCTGGGGCAGTTTGCTTGCTCCTTTGCTCAGGTGTTCATCCTGGGGATGCCCTCTCGAATCGCCTCAGTGTGGTTTGGTTCAGGTGAGGTGTCTACTGCCTGCTCCATTGGCGTGTTCGGCAACCAGCTTGGTATTGCTATTGGGTTCCTGGTGCCACCTATTCTTGTGCCCAATGTGGAGGACTTGGATAAACTGGCTCATCACATCAGCATCATGTTTTATATTACAGCTGGAGTCGCCACACTGATCTTCTTTCTGGTTATTATCGtgttcCAGGAAAAGCCAGAAATCCCTCCCTCTCAGGCCCAAGCAGCGATGAGAAACATGTCCCCTCAAGAATATTCTTACCTGGCCTCTATAAAGAGGCTCATCCACAACAAATCTTTCATCCTGCTCATCATCACCTATGGATTAAATGTGGGGTCTTTCTATGCTGTTTCCACTTTGCTGAACCGGATGATAATTGACCACTATCCTGGGGAAGAGGTTAATGCTGGAAGAATTGGTCTAACTATTGTCATTGCTGGTATGGTGGGCTCCCTCATCTGTGGGATCTGGTTGGATAAATCTAAGACCTACAAGCAGACCACACTTGCGGTATATTTCCTGACGTTAGTGGGCATGCTGATCTATGCCTTCACCCTCGACTTGGGCCACCTCTGGGTAGTCTTTCTCACAGCAGGTGCACTAGGGTTCTTCATGACTGGCTATCTGCCGTTGGGCTTTGAGTTTGCAGTAGAACTCACATACCCAGAGTCCGAGGGCACATCCTCAGGCCTGCTCAACTGCTCAGCACAGGTATTTGGAATAATATTCACAATCTGTCAAGGGAAGATCATTGACTACTATGGCACACTTGCTGGCAACATCTTCCTCTGCATTTTCCTCCTTATAGGGACAATTATGACAGGCTTCATAAAGGCAGATCTGCGGCGGCAGAGGGCGAACCAGGTGGCTGAGACAAATGCAAAGAAGCCAGGATGCCAGGAAGAAGGACTATCTTCCCCACTGAAAGAGGACAAAGTGTAGGACTAAAACATTCCTGAGTGAATCTTTCTCACACAGCACACATCTATTACAAGGTATTCACACAGAAAGGAGAATCCTCATAGCCAACCTGAAAAAGTGGATACTGCTGAATatttaaaccaaacaaaacaactTATTATGGAATATGGGTAGTTCAAATCCAATAGTGTACATAAAGTTGTACACTATATTATGGTGTGCGATGGGatcattataaaaaagaaatagcaGAAATCCAAAGGTAGtgcactttataaaaaaaatagggcACAGATTTAGACACAGCTGCTGTCAACTTAAAATGACCTACCTAAAATCTATACTGAAGAACTCCATGCCAAAAGTCTGCTGGAAATCTGCAGTGTTTTACAATGTGAATCTATTTATTAAAGCACAACACGGTGCTTATTTAGTGGCTTATGTAGTGACAATCAAATGCATTAATATTCTTAAAAAGAAATAGTATTAATAGCCTACCGTAATTCACTACAGAATTTAATGGATTTTATGttttctatttatattttatatatatatacaaaacagtGTTAACCAGGTTGATGTTGATCACGCACTTTAAATGTTAGAATTAATTAACCTCTACTTATTATATTCTGTGTATTATTCCCATGATTTTTAATAACTATctgaataaatgattttaatcaAAGCAATACTGACTGGCAGTGTGCCATAAGACCATATATCTTTATAATAATGGTTTTATAGTATAAAGTGTGTTAAAATGACTAGAAAGTGTAAGATAAGTGCTGACTTTATAAATTATCATCcagtattatttttgtttagtcCTGACCTCTCATTAGAGTTAATGAGAAGGCACATCTGTATAGTATTGCTGTGTTCTGATTGATGCTATGCATCAAAACATTATCTCTGAGCCcagaaaaaaagtctgaaacAGGTTCTTACTGTATTTTGAGAATTATGTGAcgctttaaaaaacaacaatgctgtacatataaatataatttttcagTTTGAACCAAAATAGCTGTCAATTGTTCAAACCACTTCAACTGTACTGTGTGGTTTGTGTAATTGGTTATTTAACCAAGTTGTAGCAACAATGTATAGTCCATACAAAATGGTTATCTCTCAGCATATCTTACATCTACTGTATGTTCAGTTTAGTAAAACAGAGTTCAGATCGGACCAGTCTTGTGAATTAATCATccattttactaaattaaaggaTTCTGTAAGTGGGTCAAAAGTCTCAACCATGATCAAAACGTTCATTGAAATTAATCTTTAGAGTTTAAATACTcaattatgtaatatatttataaccaACACACCTTTATAggtatttactttactttactgtgtATCTGATTTTGGATTGTATTAAATAGACTTCTTTTGTAATTCCAGCATATGCTATGGCAGATCATATCAATATGAGGGAAGTTCTGTAGCACTTACAgtcttttttaagtatatatacatatacacatattttgttgaaaaaaaaaatgctgttatgTTGATATTCTGCCCAGTATATAACCATCAGGTGCTGTGATAATATTTGTCTTGTATGAGGCTGCAGAGAATTTTGTTTTAGCATCGATAGCAATGTTTTGTGCAATGTCAATATCTTTTTCCAAAGTTTTTGCTTTTGTTgcttaaaacacagaaaaattcTCATTGTTCTCATTTTACATGACAATATGTACTAGATCATcaattatatgatatatgaattatatatgaaatttaaaatccccttttttttattttttatttccctaatattgtgcagccctagtccacagtatatttttgaaatggtatacttttaaaaatattatatacgtATATAAATAATTCTAGAACTGTTCTTAGGACTTAATAGTTTTCTGacagaaattaatattaaagtaaattgtagcatattttaagcatttttttgtcaactgtcttt
>XM_007257350.3
TTACGTCTGAAGGTGGAAATGTGCTGGAACATATCAATATCATCATCGTATGGAGATGCAGAATTAAGCCATTAGAGAACAACAGCCTGGTCAGATTACAAAGGAGCATTGTTTAGTTGTGTAAgacattttattgttattttctctGGTCGTGTCACATGACCAAAGCTTAGTCCAAAGCTGTTGAATACAAGGGCATTGAGTTGGGTACAGCACAGCTGCCTGGAGACATGGGCATGAAATGGTCAGGCTTTGGGTTGGATGGTTTTGTTAGTGGTGGGGAAATcgtattaaatgtacaataacTCCACATACAagggaaacttcactctagaggACTAACGGATTGTTTGGGACAGCTAACAAAAGCTACAGAAAACGAGCAGGAGAAGGAGGAGTGCTTGGTGGAGTGTGGCAGTGCGGGTGCTGGCAGAATGAGCTCACAGCTTGGCTACCAGCTGCAGGACTGTGCGGATGGCTATGTCAGGAGTGGAGAGACTGGGGTGAAGTCTGTATCCTTATGGAGGAATACCAAAAGCCCAGGTGAGGACTTAAATGGGCGCCAAAGGTCTACTCTACCTGGCATTACTGGGATTGacgtggaggccaggtcatcaGACACATTAGCATTGGTTCCTCTGGTGCAGACCAAGCTCTACAAGCGACGCTGGGTCATGCTTTTTCTGTTCAGTATCTATTCCATGAGCAATGCCTTCATGTGGCTCCAGTATGGCATCATCAACAACGTCTTTATGCGCTTCTATAACATTGACGCCTTTGCTGTTGACTGTCTCTCCATGATTTACATGCTCACGTACACTGTCCTCATAGTGCCGGTGATGTGGGTTCTGAGCAGCTACGGCATCAGGGAGATAGTGGTGGTTGGTTCTGCCTTTAACTGTATTGGAGCTTGGATCAAGACCGGCACAGCTCGCCCAGGCATGTTCCCCGTCACCTTTTTTGGCCAGTTTGTGTGCTCTGTAGCCTCAGTATATGTCTTGGGCATACCCTCCTTCTTagcttcagtttggtttggtaaGCATGAAGTGTCCATGGCCTGCTCCATCGGAGTTCTGGGAAACCAGCTTGGTATTGCTATTGGGTTCCTGGTGCCACCTATTCTTGTGCCCAATGTGGAGGACTTGGATAAACTGGCTCATCACATCAGCATCATGTTTTATATTACAGCTGGAGTCGCCACACTGATCTTCTTTCTGGTTATTATCGtgttcCAGGAAAAGCCAGAAATCCCTCCCTCTCAGGCCCAAGCAGCGATGAGAAACATGTCCCCTCAAGAATATTCTTACCTGGCCTCTATAAAGAGGCTCATCCACAACAAATCTTTCATCCTGCTCATCATCACCTATGGATTAAATGTGGGGTCTTTCTATGCTGTTTCCACTTTGCTGAACCGGATGATAATTGACCACTATCCTGGGGAAGAGGTTAATGCTGGAAGAATTGGTCTAACTATTGTCATTGCTGGTATGGTGGGCTCCCTCATCTGTGGGATCTGGTTGGATAAATCTAAGACCTACAAGCAGACCACACTTGCGGTATATTTCCTGACGTTAGTGGGCATGCTGATCTATGCCTTCACCCTCGACTTGGGCCACCTCTGGGTAGTCTTTCTCACAGCAGGTGCACTAGGGTTCTTCATGACTGGCTATCTGCCGTTGGGCTTTGAGTTTGCAGTAGAACTCACATACCCAGAGTCCGAGGGCACATCCTCAGGCCTGCTCAACTGCTCAGCACAGGTATTTGGAATAATATTCACAATCTGTCAAGGGAAGATCATTGACTACTATGGCACACTTGCTGGCAACATCTTCCTCTGCATTTTCCTCCTTATAGGGACAATTATGACAGGCTTCATAAAGGCAGATCTGCGGCGGCAGAGGGCGAACCAGGTGGCTGAGACAAATGCAAAGAAGCCAGGATGCCAGGAAGAAGGACTATCTTCCCCACTGAAAGAGGACAAAGTGTAGGACTAAAACATTCCTGAGTGAATCTTTCTCACACAGCACACATCTATTACAAGGTATTCACACAGAAAGGAGAATCCTCATAGCCAACCTGAAAAAGTGGATACTGCTGAATatttaaaccaaacaaaacaactTATTATGGAATATGGGTAGTTCAAATCCAATAGTGTACATAAAGTTGTACACTATATTATGGTGTGCGATGGGatcattataaaaaagaaatagcaGAAATCCAAAGGTAGtgcactttataaaaaaaatagggcACAGATTTAGACACAGCTGCTGTCAACTTAAAATGACCTACCTAAAATCTATACTGAAGAACTCCATGCCAAAAGTCTGCTGGAAATCTGCAGTGTTTTACAATGTGAATCTATTTATTAAAGCACAACACGGTGCTTATTTAGTGGCTTATGTAGTGACAATCAAATGCATTAATATTCTTAAAAAGAAATAGTATTAATAGCCTACCGTAATTCACTACAGAATTTAATGGATTTTATGttttctatttatattttatatatatatacaaaacagtGTTAACCAGGTTGATGTTGATCACGCACTTTAAATGTTAGAATTAATTAACCTCTACTTATTATATTCTGTGTATTATTCCCATGATTTTTAATAACTATctgaataaatgattttaatcaAAGCAATACTGACTGGCAGTGTGCCATAAGACCATATATCTTTATAATAATGGTTTTATAGTATAAAGTGTGTTAAAATGACTAGAAAGTGTAAGATAAGTGCTGACTTTATAAATTATCATCcagtattatttttgtttagtcCTGACCTCTCATTAGAGTTAATGAGAAGGCACATCTGTATAGTATTGCTGTGTTCTGATTGATGCTATGCATCAAAACATTATCTCTGAGCCcagaaaaaaagtctgaaacAGGTTCTTACTGTATTTTGAGAATTATGTGAcgctttaaaaaacaacaatgctgtacatataaatataatttttcagTTTGAACCAAAATAGCTGTCAATTGTTCAAACCACTTCAACTGTACTGTGTGGTTTGTGTAATTGGTTATTTAACCAAGTTGTAGCAACAATGTATAGTCCATACAAAATGGTTATCTCTCAGCATATCTTACATCTACTGTATGTTCAGTTTAGTAAAACAGAGTTCAGATCGGACCAGTCTTGTGAATTAATCATccattttactaaattaaaggaTTCTGTAAGTGGGTCAAAAGTCTCAACCATGATCAAAACGTTCATTGAAATTAATCTTTAGAGTTTAAATACTcaattatgtaatatatttataaccaACACACCTTTATAggtatttactttactttactgtgtATCTGATTTTGGATTGTATTAAATAGACTTCTTTTGTAATTCCAGCATATGCTATGGCAGATCATATCAATATGAGGGAAGTTCTGTAGCACTTACAgtcttttttaagtatatatacatatacacatattttgttgaaaaaaaaaatgctgttatgTTGATATTCTGCCCAGTATATAACCATCAGGTGCTGTGATAATATTTGTCTTGTATGAGGCTGCAGAGAATTTTGTTTTAGCATCGATAGCAATGTTTTGTGCAATGTCAATATCTTTTTCCAAAGTTTTTGCTTTTGTTgcttaaaacacagaaaaattcTCATTGTTCTCATTTTACATGACAATATGTACTAGATCATcaattatatgatatatgaattatatatgaaatttaaaatccccttttttttattttttatttccctaatattgtgcagccctagtccacagtatatttttgaaatggtatacttttaaaaatattatatacgtATATAAATAATTCTAGAACTGTTCTTAGGACTTAATAGTTTTCTGacagaaattaatattaaagtaaattgtagcatattttaagcatttttttgtcaactgtcttttttat

Function

symbol description
flvcr2 Enables heme binding activity and heme transmembrane transporter activity. Predicted to be involved in heme export. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Implicated in proliferative vasculopathy and hydranencephaly-hydrocephaly syndrome.

GO: NA

KEGG:

id description
K08220 FLVCR, SLC49A1_2; MFS transporter, FLVCR family, feline leukemia virus subgroup C receptor-related protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257349.3 False 3598 mRNA 0.38 10 28152935 28177699
XM_007257350.3 True 3944 mRNA 0.39 10 28158803 28177704

Neighbor

gene id symbol gene type direction distance location
jdp2 jdp2,jdp2a,LOC107701522,LOC107589793,LOC107702236 coding upstream 2826 28134313 ~ 28150109 (+)
LOC103036705 fos,LOC108423428,LOC107702235 coding upstream 22045 28127393 ~ 28130890 (+)
acyp1 acyp1 coding upstream 31228 28119021 ~ 28121707 (+)
nek9 nek9 coding upstream 39644 28103916 ~ 28113291 (+)
ndc80 ndc80 coding upstream 50999 28094363 ~ 28101936 (+)
ttll5 NA coding downstream 4723 28182427 ~ 28265327 (+)
ift43 ift43,LOC107688076 coding downstream 120256 28297960 ~ 28320492 (+)
LOC111193237 NA coding downstream 177870 28355574 ~ 28356809 (+)
gpatch2l gpatch2l coding downstream 197833 28375537 ~ 28417805 (+)
esrrb esrrb,LOC107678144,LOC106611051 coding downstream 251242 28428946 ~ 28560094 (+)
G84001 NA non-coding upstream 229577 27923069 ~ 27923358 (+)
LOC111193235 LOC103459065 non-coding upstream 306969 27831977 ~ 27845966 (+)
G83972 NA non-coding upstream 448054 27704254 ~ 27704881 (+)
LOC107197843 NA non-coding upstream 537368 27604237 ~ 27615567 (+)
G83826 NA non-coding upstream 883704 27268958 ~ 27269231 (+)
G84164 NA non-coding downstream 124029 28301733 ~ 28360989 (+)
LOC111193142 NA non-coding downstream 151071 28328775 ~ 28331408 (+)
G84219 NA non-coding downstream 196244 28373948 ~ 28374517 (+)
G84264 NA non-coding downstream 409692 28587396 ~ 28587954 (+)
G84280 NA non-coding downstream 528189 28705893 ~ 28723051 (+)
LOC103044189 LOC108423527,LOC107677688 other upstream 321351 27824256 ~ 27831584 (+)
fam98b NA other upstream 330724 27815805 ~ 27822211 (+)
fermt2 fermt2 other upstream 1375447 26727823 ~ 26777488 (+)
spata7 NA other upstream 1753668 26392890 ~ 26399267 (+)
LOC103031022 LOC103031022,LOC108423548 other upstream 1825597 26321185 ~ 26327338 (+)
LOC107197841 NA other downstream 792560 28970264 ~ 28970839 (+)
LOC103045392 NA other downstream 821798 28999502 ~ 29025114 (+)
LOC111193240 NA other downstream 863275 29040979 ~ 29041607 (+)
LOC111193135 NA other downstream 865513 29043217 ~ 29043739 (+)
LOC107197844 NA other downstream 894187 29071891 ~ 29078898 (+)

Expression


Co-expression Network