acyp1 (acyp1)


Basic Information

Item Value
gene id acyp1
gene name acyp1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 28119021 ~ 28121707 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257364.3
GTTGACACACGTTACTTAGAAACAGGACAACAAACGTGCTGAGCCGTTCTCTCGTTTGATTGGTTAGTCTGCAGTGACGGCAGTGACCCGGATGTTGCCGTGCCGCCTATGAAACGAGTCGGATCCACACGAGGAGCTTCCTGCGTTCTGTATGAAGGCGAAAACAGCGCTGTTTCAGACGCTCTTCCTTTATTTATTGCTCTTAAAGGCCACAACCATGTCAGAGGAACTTCTGTCAGTGGACTATGAAGTCTATGGGAAAGTTCAGGGTGTGTTCTTCCGAAAATACACTCAGTCTGAAGGAAAGAAGCTTGGCCTGGTTGGATGGGTGCAGAATACCCCAGCTGGAACTGTACAAGGGCAGCTTCAAGGACCAGCCTCCAAAGTCAAACAGATGCAGGAGTGGCTCAGAACCACTGGGAGTCCTCAGTCACGAATAATAAAAGCAGAGTTCAATAATGAGAAGACCATTGAGAACTTGGACTTTAAAGACTTTAAAGTTGCCCGTTAATGAACACAGTAAATTAATGAAATTGTTGTGACTACTcttaacttattattttttatttagacattATAGATGAATTATTTTGTCTGTTACTCTGACAATACACTCCAATATAGGAGTATGCACACGTGCACTAATAAATACACATGACATTCAAATA

Function

symbol description
acyp1 Predicted to enable acylphosphatase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to human ACYP1 (acylphosphatase 1).

NR:

description
acylphosphatase-1

GO:

id name namespace
GO:0003998 acylphosphatase activity molecular_function

KEGG:

id description
K01512 acyP; acylphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257364.3 True 668 mRNA 0.43 3 28119021 28121707

Neighbor

gene id symbol gene type direction distance location
nek9 nek9 coding upstream 5730 28103916 ~ 28113291 (+)
ndc80 ndc80 coding upstream 17085 28094363 ~ 28101936 (+)
ttc8 ttc8,LOC106591546 coding upstream 33746 28079573 ~ 28085275 (+)
LOC103040475 LOC108423515,LOC108269951 coding upstream 46427 28010514 ~ 28072594 (+)
LOC103041699 prima1,LOC108423434,LOC108270468 coding upstream 197848 27906826 ~ 27921173 (+)
LOC103036705 fos,LOC108423428,LOC107702235 coding downstream 5686 28127393 ~ 28130890 (+)
jdp2 jdp2,jdp2a,LOC107701522,LOC107589793,LOC107702236 coding downstream 12606 28134313 ~ 28150109 (+)
flvcr2 flvcr2,LOC106525280,LOC106571030,LOC108242486,LOC104964435 coding downstream 31228 28152935 ~ 28177704 (+)
ttll5 NA coding downstream 60720 28182427 ~ 28265327 (+)
ift43 ift43,LOC107688076 coding downstream 176253 28297960 ~ 28320492 (+)
G84001 NA non-coding upstream 195663 27923069 ~ 27923358 (+)
LOC111193235 LOC103459065 non-coding upstream 273055 27831977 ~ 27845966 (+)
G83972 NA non-coding upstream 414140 27704254 ~ 27704881 (+)
LOC107197843 NA non-coding upstream 503454 27604237 ~ 27615567 (+)
G83826 NA non-coding upstream 849790 27268958 ~ 27269231 (+)
G84164 NA non-coding downstream 180026 28301733 ~ 28360989 (+)
LOC111193142 NA non-coding downstream 207068 28328775 ~ 28331408 (+)
G84219 NA non-coding downstream 252241 28373948 ~ 28374517 (+)
G84264 NA non-coding downstream 465689 28587396 ~ 28587954 (+)
G84280 NA non-coding downstream 584186 28705893 ~ 28723051 (+)
LOC103044189 LOC108423527,LOC107677688 other upstream 287437 27824256 ~ 27831584 (+)
fam98b NA other upstream 296810 27815805 ~ 27822211 (+)
fermt2 fermt2 other upstream 1341533 26727823 ~ 26777488 (+)
spata7 NA other upstream 1719754 26392890 ~ 26399267 (+)
LOC103031022 LOC103031022,LOC108423548 other upstream 1791683 26321185 ~ 26327338 (+)
LOC107197841 NA other downstream 848557 28970264 ~ 28970839 (+)
LOC103045392 NA other downstream 877795 28999502 ~ 29025114 (+)
LOC111193240 NA other downstream 919272 29040979 ~ 29041607 (+)
LOC111193135 NA other downstream 921510 29043217 ~ 29043739 (+)
LOC107197844 NA other downstream 950184 29071891 ~ 29078898 (+)

Expression


Co-expression Network