ddx24 (ddx24)


Basic Information

Item Value
gene id ddx24
gene name ddx24
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 27860194 ~ 27869973 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257378.3
TAGTGGGTTAGCAATATCTGGCAACCCTGTTTTGTCGTCACTGGTGTAATGGCTGCGTCCGCGTGTTGGGCATGTGTGTGAGGAGCTGTGCTTGGACACGAGCAGCGTATTAAACAGGAGGAGAGGATTAATACTaaaaaataaagatgaagaCCAAAATGTTGTCAAAGAAGCGGCCTGGATCTGGCAAAAAAAGAGGGATCCTTGTAAAGGGCCAATGGAAGACTGTTAAGATAGATCCCAGCATTTTTGCTGATGAGGCCATGGGAGAAGTCGTTGTCTTCGAAGAACTGACAGATTATTCATTGGTTGAATCTAATAAGACAGTTGCTGTGTCCAAGTTGCTACAGGAGTCCGtagggaaaaagaaaagaaagagcaacaaGAGAACAGCCAGAGAAATAGAGGACGAAGAAGGACTTTTGAATGAAGAATTTGCAGAGCAGTcatctgatgatgatgatgatgttgaaaAACTGGATATTGTAGAGAAACCAGCTAAAAAgcggaaaaagaaaaagaagaaaaccaaGGGGAACACAGTAGCGGGTATAGAGAGTCAAGACACTTCAGAAGGTTTGTCCAATCTGACCAAAGAAGGAGAAGATCAAACACAAGAACAATCTGAAGGAAGTTGTTCAGTTACAATATTGACGtctggaaaaaagaagaaaacaaagaaacagaaatCCGCCACAGAACAAGCCATGTCGTCTTCACAAGTGATTGAAACTGATGCCCAAGTGAACCCTGTTGGCAAGTCTAAAAGAAAAGGCAAGAACTGGACAGATGCTGCCCTCTCAAACTCAGCAGCTCAGGATTCAGACGTATCTGCATGGAAAGACCTGTTTGTACCTGAACTTGTTTTAAAGGCACTAAGTAAACTTGGATTCTCTGCACCGACACCAATTCAAGCTCTTGCTCTTCCTCCTGCCATTCGAGATCATATGGATATTCTGGGTGCAGCAGAAACAGGAAGTGGGAAGACATTGTCATTTGGAATTCCAATGATTCACAGGATATTAGAGTGGAAGAAATCTGTCCATGCTAAGAATGCAGGTTTATCCACTGGGAAGAGCACAGAGTCTGGATTAGACCAGGCAGATGAGGAGATGCCAGACATTGAAACAGACTCCATAGCACAGGAGGATGGTAAAAATGATGAAGATGAGGGGATAATATTGGAGGCAGCAGAAGATGGAGAGGAGATGGCTGGTGAggaggaagatgatgatgaagaagaacaGCAGAGTCGAGACGATGGCTTGGCAACTAATGATGAAGGTGTATTGGACATTGAAACAAAGGGGACGGAGAAACAAGACAGCGAGAAAAGGCCTCTGCTTGGACTTGTTCTCACTCCTACTAGAGAATTAGCAGTTCAAGTCCAGCATCACATTGATGCTGTGGCACAGTTCACAGGTATAAAAACTGCTATTCTTGTGGGAGGCATGGCACCACAGAAACAAGACCGGGTGTTAAAGCGCAGACCGGAGATTGTAATAGCAACACCAGGTCGTCTGTGGGAGATGATTCAGGACAGGCACCCTCATTTGCGTAATCTGAGGCAGCTCAGGTGTCTGGTCATTGATGAAGCTGACCGCATGGTGGAGAAAGGCCATTTTGCTGAGCTTGAGAAATTGCTGGAAATGCTCAGCACATCCCAGTTCAACCCAAAGAGGCAGACCTTTGTGTTCTCCGCCACGCTGACTATGGTCCACAGTTTACCTTCCCGCCTGGCACGGAAGAAAGgaaaacagctggagcagcgCAGCAAGCTGGAGCTCCTCATGGAAAAAGTGGGAATCAAAAACAAGCCTAAAATCATCGATCTCAGCCGCAAGGAGGCCACAGTAGAGACGCTGACTGAGACCAAAATCCACTGTGAGAAGGAAGAGAAAGATTTCTATCTCTACTACTTTCTTCTGCAGTACCCTGGCCGCACAATGGTGTTTGCCAACAGCATTGACTGCATAAAGAGGCTTACGTCGCTGTTGACTATTTTGGACTGCAACCCACTACCACTGCATGCCAACATGCACCAGAAACAGAGGCTGAAAAATCTGGAGAGATTTGCAGAGAGGGAGAGTTGTGTCCTCCTTACCACGGATGTTGCTGCTCGAGGGCTTGACATTCCAGATGTTCAGCATGTCCTTCACTATCAGGTTCCACGGACATCTGAGACTTACGTCCATCGTAGTGGACGTACAGCTCGTGCTGCTAAAGAGGGTCTCAGTTTGCTTCTGATTGGGCCAGATGATATGATCAACTTTAAGAAGATCTACAAGACTCTGGGGAAAGACGAGGATCTTCCAGTGTTTCCTATTCAGAACAAATGCATGGCTGCAATTAAGGAACGGGTTAACGTAGCCAGGGGCATTGAGAAAATTGAATACCACAACAGCCGAGCAAAGCAGCACAATTCATGGTTGAGGCAAGCAGCAGAGGAAATGGATATAGACGTAGATGATGATTTGCTTATGGGAGGTggaagagatgagagagaggacCGGGACCAACAGAAGCTAGTGAAAGGCATGAAGAAACACCTGAAGCACCTGCTCAGCCAACCAGTCTTCAAACCCCACATGCAGACAAAATACCCGACTCAGATGGGCAGGCTGCAGCTGCCAGAGTTACCCCTGGCCAGTGAAACAGCATTAAGCAGTTTGACCAATCAACAGCgtaaacaaaaacagcagcaaaagCGTAAACTGTAACATTTGGAATATTAAACAGAATTGGATATATGggatttgtgtaaaaatgtcaaaaagttTTTGTCCTGTGTATAGAAAATGCCATTAAGCAAACAATTTTCCTACTGTTTTGAAAACTATGTTTTGtgtatctaatttttttttttttttaccgaagTGGTGGTGGTCCAAGCCCTATTTTCAGTGCTCTCTATGCTTATAGAGAATGTCATAGTGAGAGGTCTTGTAGAGAAGGTATATGGAACATTCAGACCCCTCTGGAATGGTGTGGTACACAAGGTGGCCATCACTGCTGTCCATAGATATGATACACAAACTAATGTCCAGTGCCTCAGACAAAGCCAGAATCTCCACATGGTCACACTCCATCGCCATGGCTTCTACTTCCTAAGAAATCAAAAGAGTAACTGTACAGGTCAGTGCTGCAAAGCATGGAAAGACCTGGCTTCTATGCATGCTCTTTATAACATGGGTCTCACATCTTATCCACAATAAATGGGCGGAGGTGCGGGTTTTAATTCCAATCAAACATACCTGATTCCATCTGTTCTATCACCTAATCTCAGCCTTTAAACTGGCTTCCTCGTAAAGGATGTGCTTCTGCTTGCTTGGAATTAAAACCGGCAGCCACTACAGCTCTTTAAAATTGGTGACTCTGGCTTTAAtacatgataaaataaatactgaccTGAGTACAATAAGCTTTAAGGTTAGGGGCTTCCAAAAAGTGTTGGAAGAAATCTGCATGGTTCTGCAAGTGTGCGGAGGTGAGGAGTCTCAAATACTTCACCATGCTGTCTGAGGTAGTGTGATCATTGAAAAACCCCAGAAGAGTCTCTTCACAGTCATCTGCTTCAAGCTGATCTAGGACCCTGAGAAACTTAAAACAGAGCCAAACATTTAGTTAATACTTCTGCTgtcaacataaaaaacatgcaCACATTTCCTTTCCAGGTTGTTAAAGGTGGAACATGGAGCTAGTGTTAATTTCCTACAGTAAAGCTCtaaattctttctctctctaccaaaaataacattttaatgatcATCACAGAATAGTTttgtaattaaaacaatttaagtGATTAACACcacaaatagaaaataatgtaattttttccaATTATACTTAAATGTTCATTATTAAAAAGCTCAATTTTAAAAGGAGAAATCTAGTGTTAAATGGGTACAAATGTCTGTCAAATAGACCACCTTCGTTCAGAATGAATTCAGAGGAAATGCATTAATTCAAACTGTgtcaaaaatatttgtaatacttatgcatttccactgaattaattttgcaatctgtgcTCCTTAGTCAACATATCATGACttgattttaatttgatttggtgGCACCCGAAGAACTGCCTTAAAGTACCGTGTGTATacacattgtttttaataaagtaccTGTGCacctgttta

Function

symbol description
ddx24 Predicted to enable several functions, including ATP binding activity; RNA helicase activity; and nucleic acid binding activity. Predicted to be active in nucleolus. Orthologous to human DDX24 (DEAD-box helicase 24).

NR:

description
ATP-dependent RNA helicase DDX24 isoform X1

GO: NA

KEGG:

id description
K14805 DDX24, MAK5; ATP-dependent RNA helicase DDX24/MAK5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257378.3 True 4151 mRNA 0.43 9 27860194 27869973

Neighbor

gene id symbol gene type direction distance location
LOC103042318 LOC103042318,LOC108423523 coding upstream 1453 27855741 ~ 27858741 (+)
LOC103043868 atxn3,LOC108423524,LOC106596382,LOC107575702,LOC107683100 coding upstream 4812 27848677 ~ 27855382 (+)
spred1 spred1 coding upstream 46286 27770793 ~ 27813908 (+)
c9h15orf41 cunh15orf41,c9h15orf41,cssa01h15orf41,clg19h15orf41,LOC105897278 coding upstream 353903 27428752 ~ 27506291 (+)
stxbp6 stxbp6 coding upstream 963126 26795808 ~ 26897068 (+)
LOC103042002 LOC108423517 coding downstream 11055 27881028 ~ 27894983 (+)
LOC103041699 prima1,LOC108423434,LOC108270468 coding downstream 36853 27906826 ~ 27921173 (+)
LOC103040475 LOC108423515,LOC108269951 coding downstream 140541 28010514 ~ 28072594 (+)
ttc8 ttc8,LOC106591546 coding downstream 209600 28079573 ~ 28085275 (+)
ndc80 ndc80 coding downstream 224390 28094363 ~ 28101936 (+)
LOC111193235 LOC103459065 non-coding upstream 14228 27831977 ~ 27845966 (+)
G83972 NA non-coding upstream 155313 27704254 ~ 27704881 (+)
LOC107197843 NA non-coding upstream 244627 27604237 ~ 27615567 (+)
G83826 NA non-coding upstream 590963 27268958 ~ 27269231 (+)
G83824 NA non-coding upstream 615926 27243756 ~ 27244268 (+)
G84001 NA non-coding downstream 53096 27923069 ~ 27923358 (+)
G84164 NA non-coding downstream 431760 28301733 ~ 28360989 (+)
LOC111193142 NA non-coding downstream 458802 28328775 ~ 28331408 (+)
G84219 NA non-coding downstream 503975 28373948 ~ 28374517 (+)
G84264 NA non-coding downstream 717423 28587396 ~ 28587954 (+)
LOC103044189 LOC108423527,LOC107677688 other upstream 28610 27824256 ~ 27831584 (+)
fam98b NA other upstream 37983 27815805 ~ 27822211 (+)
fermt2 fermt2 other upstream 1082706 26727823 ~ 26777488 (+)
spata7 NA other upstream 1460927 26392890 ~ 26399267 (+)
LOC103031022 LOC103031022,LOC108423548 other upstream 1532856 26321185 ~ 26327338 (+)
LOC107197841 NA other downstream 1100291 28970264 ~ 28970839 (+)
LOC103045392 NA other downstream 1129529 28999502 ~ 29025114 (+)
LOC111193240 NA other downstream 1171006 29040979 ~ 29041607 (+)
LOC111193135 NA other downstream 1173244 29043217 ~ 29043739 (+)
LOC107197844 NA other downstream 1201918 29071891 ~ 29078898 (+)

Expression


Co-expression Network