LOC103043263


Basic Information

Item Value
gene id LOC103043263
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 27875148 ~ 27880315 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257380.3
CAGGGGGACTGGTGGTTCTTAACTGAGCCCCTTGTCGCCCCCTGTAGGACCCTCGCTCACACTATGCTGAAAAACGCGCGGGCCGGAAAGTTGCCAAGGGCAACCGAGAGGGGCTTGGAGTgcgtggctgtgtgtgtgagccgCGGTTACCGGGTAACGGGAACATAGAGCGGAAGGAGCGGGTCGGAGCCGcggctgctgctggaggagctgctggagggTAAATGTGAGAAATCCCGCCGCTTTCTCCTTCTGATTAACACTCGGAGAGCGCAGCCCGGGCTCTGAGCATGGCCGCGGGGTCTCTGCCTGCGCTGAGCCCGGAGGACCCGCGCCTGCAGCTCCGAGTGGAGAACAGGTGGAGGAATATTTTTGTGACGCAGGCGGAGGACGTCAGCCTTCATGACAAAGAGCAGGAGGATAATGTCAATCACATTCCTGTCATAACAGAGTCATCCAGCAGGATATTGGACACGGGTGTCAACACTCTTCAGAGGACTCTATTGCTGAAGAAGCAGCTGAAGGTTGATGAGGTGAACACAGAGTTAAAACAGAAACAACTGGAGTTTCGAGCTCGAATGCAGATTCTGGAGAAGAGGAGGGCAGAACTTCTGTTAAAACAGCAAGAAACAAAAGACAGGGCCGTAAAATTTGAGAAGTTTGTAGAAGAAAATGAGGTGAAACGACGTCGTGCTTTGAAGAAATAtcaagtagagagaaaacaaaatgagcagaaggagaaagagaaatcaGAACTATGTGAACATTTCGATCAGCTTCAGATCAGGCATCAATATCTTAAACAAAGGGTTGAAAAATATAAGATGTATGAAGAGTATCTGAGGAAGATTCTAGACTTACTTccagagaATTATCTAGAGTATGGATCTGACTCGTTGGCGATGCCCATCATCAGACGGCATGAGACTCTGTCCATCACCCAGCAGACCCTGGTACAGCACCTGACTGGTTTATCAGAGGAACTTGAACAGGGCCAGCGCAACCTTGACTCACTCAAACAGGAGCACAACACAAGCAAACTGATGATCAACAAGGAGATGTCAGAACTGCAGACGCAGTGGGACCAAATCAAAGAGAAGAATAAACAACTGGAAATGACCTTGCAGATTCACCAGGGCCAGAACCGAGACCAGGCTGAGGAGATTGGCAGTCTAATGATAGCAGTGAAAAATCTTGGGCAGCAATGCCATCTGCAACACTATGGATCATTAGATGATATGAAAATGCTGACCATGATGGATATGATAATGGAGTTCATTCTGGATAAGGCAGATTTAGAGAGAAGAGCAATGAGACTGACAGATTCTGGTTCAGAGATCACAAAGAGGAGTGCGGAGAGAAGGAGGACTGGATCAGCCCTGAAAACAAACAACTCCAGCAAAGTCCATCTGAAGAGTACCAGCAAGACCAGTGGAGGGAGTAAACTGCTCAGTTCATCCAAAACAATGCAATAAGAGATGTGATGTTCATTTGGATTAAATATAGATTGGAAGACGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257380.3 True 1521 mRNA 0.48 9 27875148 27880315

Neighbor

gene id symbol gene type direction distance location
otub2 otub2,ddx24 coding downstream 1442 27865545 ~ 27873706 (-)
LOC111193234 NA coding downstream 239741 27632645 ~ 27635407 (-)
meis2 meis2 coding downstream 266506 27526742 ~ 27608642 (-)
dph6 dph6,LOC106512485 coding downstream 446347 27148597 ~ 27428801 (-)
aqr aqr coding downstream 734669 27079341 ~ 27140479 (-)
fam181a fam181a coding upstream 14640 27894955 ~ 27897940 (-)
unc79 NA coding upstream 48239 27928554 ~ 27997121 (-)
LOC103039744 NA coding upstream 192544 28072859 ~ 28079529 (-)
LOC103037016 LOC103037016 coding upstream 206069 28086384 ~ 28090632 (-)
zc2hc1c NA coding upstream 234258 28114573 ~ 28119005 (-)
G84064 LOC103042318,LOC108423523 non-coding downstream 15988 27856275 ~ 27859160 (-)
G84063 NA non-coding downstream 19764 27853356 ~ 27855384 (-)
G84045 NA non-coding downstream 55284 27815850 ~ 27819864 (-)
G83973 NA non-coding downstream 170260 27704226 ~ 27704888 (-)
G83957 NA non-coding downstream 260440 27613245 ~ 27614708 (-)
G84083 NA non-coding upstream 118269 27998584 ~ 28005722 (-)
G84109 NA non-coding upstream 179702 28060017 ~ 28114357 (-)
G84107 LOC108423515 non-coding upstream 186901 28067216 ~ 28072498 (-)
G84197 NA non-coding upstream 385855 28266170 ~ 28267487 (-)
G84229 NA non-coding upstream 540669 28420984 ~ 28424692 (-)
LOC103043566 LOC108423527,LOC108270165,LOC100330554,LOC107677688,LOC103153288,LOC103458816,LOC106945627,LOC103355980,LOC102293757 other downstream 26704 27830628 ~ 27848444 (-)
cga cga other downstream 1404985 26434472 ~ 26470163 (-)
G83612 NA other downstream 1871463 25992499 ~ 26003685 (-)
LOC103040243 tdh,LOC103040243,LOC108441731,LOC107561940,LOC107723287,LOC107589050,LOC107701506,LOC107746115,LOC105018021,LOC104922441 other downstream 2834094 25034004 ~ 25041054 (-)
LOC103026430 LOC108428707,LOC108269919,LOC107102228,LOC103379330,LOC101162185 other downstream 3239267 24630879 ~ 24635881 (-)
G84215 NA other upstream 464274 28344589 ~ 28356545 (-)
rps6kl1 rps6kl1 other upstream 795283 28675598 ~ 28694982 (-)
G84392 NA other upstream 1195161 29075476 ~ 29076115 (-)
G84579 nol10 other upstream 1928214 29808529 ~ 29810277 (-)
hpcal1 hpcal1,hpca,LOC107565203,LOC107702105,LOC107556378,LOC106607246 other upstream 1978662 29858977 ~ 29930575 (-)

Expression


Co-expression Network