c9h15orf41 (cunh15orf41,c9h15orf41,cssa01h15orf41,clg19h15orf41,LOC105897278)


Basic Information

Item Value
gene id c9h15orf41
gene name cunh15orf41,c9h15orf41,cssa01h15orf41,clg19h15orf41,LOC105897278
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 27428752 ~ 27506291 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257394.3
CTTTTGCCAAAACATGTCACTTGCAGAACCTGGCAACGAATTCACGTTCCCGTCCAATCAGCTTCATCCATACTCAAACCACACgagtccagccaatcagcaccgGACTTTTTTGTGACGCCCGCCTTTCAACTTGTTCGCGGGAGAGAAGCAGGAAGCGAGCCGGTGTAATGCTTTTCAGCAGCGGCTCGGATTTAATCCACTAGCGCTTTTTCCTGGAGTGGATTTAAAACCGTTAAACTCGTATAAAACTGATCTGAAGGTGCTGAAGGATGAAGATTTGCAGGGCAGAATACAAAACAATCGCAAAATTCATTGAGCAGCTTCGACCGACTCGGCAGTGTATGAAGATCCTGAAGGACAGATTCCCCAATCACTCGCAGTCCACTCTTCTGAGCATCTTCTCCCTGGAGTACCAGaaaagaatgaaaagaaCTCTTGTGAAACACCAGGATGTCGTTGAAGACTACTTCCAGAGGTACCGTAGCGAAGCCAAGAAACGTCCTTCAGACCCTGTCCTGCTGGAGTTGGCCAACGAGGTGGACCTGTCACCATCTCTTCTGGCTCGTCTGCTGGTGGAGCGCTTCCTAGAGGAGCAGCAGGGCTCAGTGTCCTCCAAGCAAGTTTTGAACAGTATGTTAAAGGAACCATCTTTAATTCCAGACATGCAATTGGCCAAACATGTGGAACAGTGCACAATAAATGACTGCTGTTATGGACCGCTGGTAGACTGCATCAAACATGCTATTGGTCAGGAGCATGAGGAGATCCTGCGGGAGAAACTCAGAGAGAGGAACTTGTCTTTTCTAGATGAGAATCATCTACGGGCCAAGGGTTATGACAAGACCCCTGACATTATTCTCGAGGTCCCAATCGCTGTTGAAGGCCACATTGTTCACTGGATTGAAAGCAAGGCTTCGTTCGGGGATGAGCAGAGTCATCGCACGTACCTGAACGAGCAGTTCTGGAGTTACTGGAACAGGTTTGGTCCTGGGCTAGTCATCTACTGGTACGGCTTCATCTCCGAGTTGGACTGCCAGCGGGACAGAGGGATTCTGCTCAAAGACTGCTTCCCTACAGACATTGTGACTCTGTGCCATGGGTCAAGCCATTGCTGATGCTAGAGCTGAGGGTGATACCGATGCAGAGGAAGGTGGGGAGGAGCGTTTGTCGGTGGAGACGTGAATCCGGAAGAAATTTAGGTTTCCCGTTGCGCAAAAGCTACTGGCAAACATCTGCCCTGAACTCCAGTTGAACTCACAGGGATCAGGGTAAGGACAGTACCTCTGTAAAATCACGCCAGGAGGGCTGGGCTGGACTCTCCTTGGAATGGCTTGGGGTTGGCCCCTGGTCTGGACCCTACAGCCCTGCAGGAATCCCCCTGAAAAAGCAGGAGAATAGAGGGCAGGTAGCTCTTCTTATCATGGCTGTCCCTCTCCCTCCTCACTCTCTTGTGACCCTTTCACTCTCTCCTGAGACCAGTAGGGAGGTCATCACTGTTATCAGCTCTCCTGCTTTCCCCTTTCTCTGTATCTGATAGGGTGTGGCCTCTTTGGaacctttttctttccttttctattTTTGATTCGGGATGTTAAATGTCTAAAAAGAGGCTGATTAATTGAGAAAGGTCTTTTAGCTCacatccatgatttttttttttttctcaaacacaaattcaataaaattaaattaaaagttaaataaa
>XM_015607875.2
TCAAGAGAGCTTTTTTACCTTTACTTCGTATTTATTCAGCATGTCAGCAGTCAATGTGGAAGCTTGTTTGATGAAGATTTGCAGGGCAGAATACAAAACAATCGCAAAATTCATTGAGCAGCTTCGACCGACTCGGCAGTGTATGAAGATCCTGAAGGACAGATTCCCCAATCACTCGCAGTCCACTCTTCTGAGCATCTTCTCCCTGGAGTACCAGaaaagaatgaaaagaaCTCTTGTGAAACACCAGGATGTCGTTGAAGACTACTTCCAGAGGTACCGTAGCGAAGCCAAGAAACGTCCTTCAGACCCTGTCCTGCTGGAGTTGGCCAACGAGGTGGACCTGTCACCATCTCTTCTGGCTCGTCTGCTGGTGGAGCGCTTCCTAGAGGAGCAGCAGGGCTCAGTGTCCTCCAAGCAAGTTTTGAACAGTATGTTAAAGGAACCATCTTTAATTCCAGACATGCAATTGGCCAAACATGTGGAACAGTGCACAATAAATGACTGCTGTTATGGACCGCTGGTAGACTGCATCAAACATGCTATTGGTCAGGAGCATGAGGAGATCCTGCGGGAGAAACTCAGAGAGAGGAACTTGTCTTTTCTAGATGAGAATCATCTACGGGCCAAGGGTTATGACAAGACCCCTGACATTATTCTCGAGGTCCCAATCGCTGTTGAAGGCCACATTGTTCACTGGATTGAAAGCAAGGCTTCGTTCGGGGATGAGCAGAGTCATCGCACGTACCTGAACGAGCAGTTCTGGAGTTACTGGAACAGGTTTGGTCCTGGGCTAGTCATCTACTGGTACGGCTTCATCTCCGAGTTGGACTGCCAGCGGGACAGAGGGATTCTGCTCAAAGACTGCTTCCCTACAGACATTGTGACTCTGTGCCATGGGTCAAGCCATTGCTGATGCTAGAGCTGAGGGTGATACCGATGCAGAGGAAGGTGGGGAGGAGCGTTTGTCGGTGGAGACGTGAATCCGGAAGAAATTTAGGTTTCCCGTTGCGCAAAAGCTACTGGCAAACATCTGCCCTGAACTCCAGTTGAACTCACAGGGATCAGGGTAAGGACAGTACCTCTGTAAAATCACGCCAGGAGGGCTGGGCTGGACTCTCCTTGGAATGGCTTGGGGTTGGCCCCTGGTCTGGACCCTACAGCCCTGCAGGAATCCCCCTGAAAAAGCAGGAGAATAGAGGGCAGGTAGCTCTTCTTATCATGGCTGTCCCTCTCCCTCCTCACTCTCTTGTGACCCTTTCACTCTCTCCTGAGACCAGTAGGGAGGTCATCACTGTTATCAGCTCTCCTGCTTTCCCCTTTCTCTGTATCTGATAGGGTGTGGCCTCTTTGGaacctttttctttccttttctattTTTGATTCGGGATGTTAAATGTCTAAAAAGAGGCTGATTAATTGAGAAAGGTCTTTTAGCTCacatccatgatttttttttttttctcaaacacaaattcaataaaattaaattaaaagttaaataaa
>XM_022673078.1
AATACTGTCAAGAGAGCTTTTTTACCTTTACTTCGTATTTATTCAGCATGTCAGCAGTCAATGTGGAAGCTTGTTTGATGAAGATTTGCAGGGCAGAATACAAAACAATCGCAAAATTCATTGAGCAGCTTCGACCGACTCGGCAGTGTATGAAGATCCTGAAGGACAGATTCCCCAATCACTCGCAGTCCACTCTTCTGAGCATCTTCTCCCTGGAGTACCAGaaaagaatgaaaagaaCTCTTGTGAAACACCAGGATGTCGTTGAAGACTACTTCCAGAGGTACCGTAGCGAAGCCAAGAAACGTCCTTCAGACCCTGTCCTGCTGGAGTTGGCCAACGAGGTGGACCTGTCACCATCTCTTCTGGCTCGTCTGCTGGTGGAGCGCTTCCTAGAGGAGCAGCAGGGCTCAGTGTCCTCCAAGCAAGTTTTGAACAGTATGTTAAAGGAACCATCTTTAATTCCAGACATGCAATTGGCCAAACATGTGGAACAGTGCACAATAAATGACTGCTGTTATGGACCGCTGGTAGACTGCATCAAACATGCTATTGGTCAGGAGCATGAGGAGATCCTGCGGGAGAAACTCAGAGAGAGGAACTTGTCTTTTCTAGATGAGAATCATCTACGGGCCAAGGGTTATGACAAGACCCCTGACATTATTCTCGAGGTCCCAATCGCTGTTGAAGGCCACATTGTTCACTGGATTGAAAGCAAGGCTTCGTTCGGGGATGAGCAGAGTCATCGCACGTACCTGAACGAGCAGTTCTGGAGTTACTGGAACAGGTGGAGTGGGTGCATGCCTTCATCTATTGGTTTGGAAGGGTAAGAGCTGATTAGGCCCATACGTCTCTGTTGTGGCGGACAGAAACGGCCTGTGGCTCTTTCGCTAAAGGCTGGATGCAGAGCCAACCCTCTACAGCATGAAATGAGATCATCTCCCCCTCTCCCTCATTTAGCtctgcctctgtctctctctgtgtttccttttgcatctgtgtatgtgtgtacttgtgtgcgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgaaggataGAATGTAGATGAAGCCTTGTTGTGTCCTCTGTGatgatcatatttataaaaaaaagaagaacgaAATAAACTGCAGCAGGCCTTCTGAGCAAGGCTGTACGTTTGAGGTCATGTAAacagctgtttttgtttttctggaaAAGCCTTTCTTTCCAAATGATTCATCGCTGCTGTGTCGTATTCTGCATACAACAATGGAGAAATGTGTACAGCATGAAATGATTTTCaccccacacagacacacaatatGTGTTGGAGGAAAGGAAGTAAGAACCAGCTGAATGCCACCCATACTTTTATCAACATACTGCACTGCcctgccaaaagtcacgggatgGTAGCGCATAAATTGATCATGATTGTTACCTCTGGGTATAGCTTGGGAACAGTTACACCTGATGTTATCTTGTTGGCCAGTGTGCATATCACATTGCAGTGTGAATTTATTAGAGTTCGAGTGCGGCCTAATAGTGGGAGACAGAtgaatgggacattccatttctgatgcatttaacattcctcaatcctcAACATCAATGTCATGTGAACTGCTATAGAAGGCATTATCAAAAACAGTAGACACTAGACAGCATAGTCCAT
>XM_022673079.1
TACAAAACAATCGCAAAATTCATTGAGCAGCTTCGACCGACTCGGCAGTGTATGAAGATCCTGAAGGACAGATTCCCCAAaaaagaatgaaaagaaCTCTTGTGAAACACCAGGATGTCGTTGAAGACTACTTCCAGAGGTACCGTAGCGAAGCCAAGAAACGTCCTTCAGACCCTGTCCTGCTGGAGTTGGCCAACGAGGTGGACCTGTCACCATCTCTTCTGGCTCGTCTGCTGGTGGAGCGCTTCCTAGAGGAGCAGCAGGGCTCAGTGTCCTCCAAGCAAGTTTTGAACAGTATGTTAAAGGAACCATCTTTAATTCCAGACATGCAATTGGCCAAACATGTGGAACAGTGCACAATAAATGACTGCTGTTATGGACCGCTGGTAGACTGCATCAAACATGCTATTGGTCAGGAGCATGAGGAGATCCTGCGGGAGAAACTCAGAGAGAGGAACTTGTCTTTTCTAGATGAGAATCATCTACGGGCCAAGGGTTATGACAAGACCCCTGACATTATTCTCGAGGTCCCAATCGCTGTTGAAGGCCACATTGTTCACTGGATTGAAAGCAAGGCTTCGTTCGGGGATGAGCAGAGTCATCGCACGTACCTGAACGAGCAGTTCTGGAGTTACTGGAACAGGTTTGGTCCTGGGCTAGTCATCTACTGGTACGGCTTCATCTCCGAGTTGGACTGCCAGCGGGACAGAGGGATTCTGCTCAAAGACTGCTTCCCTACAGACATTGTGACTCTGTGCCATGGGTCAAGCCATTGCTGATGCTAGAGCTGAGGGTGATACCGATGCAGAGGAAGGTGGGGAGGAGCGTTTGTCGGTGGAGACGTGAATCCGGAAGAAATTTAGGTTTCCCGTTGCGCAAAAGCTACTGGCAAACATCTGCCCTGAACTCCAGTTGAACTCACAGGGATCAGGGTAAGGACAGTACCTCTGTAAAATCACGCCAGGAGGGCTGGGCTGGACTCTCCTTGGAATGGCTTGGGGTTGGCCCCTGGTCTGGACCCTACAGCCCTGCAGGAATCCCCCTGAAAAAGCAGGAGAATAGAGGGCAGGTAGCTCTTCTTATCATGGCTGTCCCTCTCCCTCCTCACTCTCTTGTGACCCTTTCACTCTCTCCTGAGACCAGTAGGGAGGTCATCACTGTTATCAGCTCTCCTGCTTTCCCCTTTCTCTGTATCTGATAGGGTGTGGCCTCTTTGGaacctttttctttccttttctattTTTGATTCGGGATGTTAAATGTCTAAAAAGAGGCTGATTAATTGAGAAAGGTCTTTTAGCTCacatccatgatttttttttttttctcaaacacaaattcaataaaattaaattaaaagttaaataaa

Function

NR:

description
PREDICTED: uncharacterized protein C15orf41 homolog isoform X1

GO: NA

KEGG:

id description
K24865 CDIN1; CDAN1-interacting nuclease 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257394.3 True 1708 mRNA 0.48 12 27428752 27506291
XM_015607875.2 False 1506 mRNA 0.48 12 27429248 27506291
XM_022673078.1 False 1662 mRNA 0.45 12 27429241 27474184
XM_022673079.1 False 1369 mRNA 0.48 10 27431558 27506291

Neighbor

gene id symbol gene type direction distance location
stxbp6 stxbp6 coding upstream 531684 26795808 ~ 26897068 (+)
LOC103023862 ddhd1 coding upstream 712737 26693418 ~ 26716015 (+)
bmp4 bmp4 coding upstream 814988 26604718 ~ 26613764 (+)
snx14 snx14 coding upstream 922240 26488033 ~ 26506512 (+)
LOC103026145 LOC108270054,LOC108423543 coding upstream 944130 26474775 ~ 26484622 (+)
spred1 spred1 coding downstream 264502 27770793 ~ 27813908 (+)
LOC103043868 atxn3,LOC108423524,LOC106596382,LOC107575702,LOC107683100 coding downstream 342386 27848677 ~ 27855382 (+)
LOC103042318 LOC103042318,LOC108423523 coding downstream 349450 27855741 ~ 27858741 (+)
ddx24 ddx24 coding downstream 353903 27860194 ~ 27869973 (+)
LOC103042002 LOC108423517 coding downstream 374737 27881028 ~ 27894983 (+)
G83826 NA non-coding upstream 159521 27268958 ~ 27269231 (+)
G83824 NA non-coding upstream 184484 27243756 ~ 27244268 (+)
G83805 aqr,LOC108423414 non-coding upstream 288355 27133975 ~ 27140397 (+)
G83795 aqr non-coding upstream 328179 27087200 ~ 27100573 (+)
LOC111193233 NA non-coding upstream 346565 27070705 ~ 27082187 (+)
LOC107197843 NA non-coding downstream 97946 27604237 ~ 27615567 (+)
G83972 NA non-coding downstream 197963 27704254 ~ 27704881 (+)
LOC111193235 LOC103459065 non-coding downstream 325686 27831977 ~ 27845966 (+)
G84001 NA non-coding downstream 416778 27923069 ~ 27923358 (+)
G84164 NA non-coding downstream 795442 28301733 ~ 28360989 (+)
fermt2 fermt2 other upstream 651264 26727823 ~ 26777488 (+)
spata7 NA other upstream 1029485 26392890 ~ 26399267 (+)
LOC103031022 LOC103031022,LOC108423548 other upstream 1101414 26321185 ~ 26327338 (+)
c9h14orf132 csgr16h14orf132,LOC108423442,LOC108269530,LOC108413331,LOC107582175 other upstream 1123369 26275001 ~ 26305383 (+)
G83602 NA other upstream 1175150 26235498 ~ 26253602 (+)
fam98b NA other downstream 309514 27815805 ~ 27822211 (+)
LOC103044189 LOC108423527,LOC107677688 other downstream 317965 27824256 ~ 27831584 (+)
LOC107197841 NA other downstream 1463973 28970264 ~ 28970839 (+)
LOC103045392 NA other downstream 1493211 28999502 ~ 29025114 (+)
LOC111193240 NA other downstream 1534688 29040979 ~ 29041607 (+)

Expression


Co-expression Network