LOC103023862 (ddhd1)


Basic Information

Item Value
gene id LOC103023862
gene name ddhd1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 26693418 ~ 26716015 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257406.3
CCCCACCTGTGGCTGCGTGAATGCGCGCTCGCGCCCGCCCGCTgtggtgggaaaaaaaacaactcacGGAGGGAGAGCTGTGGGCTTGCGTGCGCCGTGACGTAGGCGGATGGATTACGCGTGCGTGCCAGCGCGAGCCGGCGAGGCGAGCTGTTGTGGAAATGAACGGGTGTATGAAATTCGCGAAGGAAGAGCGAGAGCGGAGCAGATAACAGCAGAGCGGGGCAAAATCTGGAAAGTTCACCCAAAGAAGGTTCTGGTGCGGCGGCAGCGGCTGGGTGGAGGCGGTGGGTCAGCgcggggagggagagagagagcgcggtAGAGAgtcagtgggagagagagaggcagatttTAGGTCTGACAGATTTTAACGGTCGTTTGGTGACGCGGTGTTTTAAAGCCTAGCCTggtagttagttagcttagctagtttcGCTAGCATGGCACGGCTTTCagctaaaatgagctaaaaGCTGGGAAGtttatttagctagctacgAACTATTAACGTTAGCGTTATTGTGCTGATTTAAGGTTTGAGTGTTGATTTATCCAGCTAGTTATTTAGCTTGGTTAAGCTAACTAACACTAGCTAAcccatgttagctagctaactaacctagtTTTATggtaaatattgttattatcgTCTAGCGCTAACTAGAGCTTATGACCGcggtaacctagctaacactgGCTGGCTCGTTCCAGTCGGGGTAGGGAGCAACATTAGCTAACAGCTAGTTAGTAATGAGCAGTTTTACGAGCAAGACTCCATTCGTCAGCCCGCCGCAGAGTCCCGAGAGCCGAGGCTCCTCTCTGGGCAGCAGCAGCGACTGGGACTATGCCAACGATGTGTTCGTCTGCTGCTACGACGAGTCCATCGGCAGGGGGATGCAGGCAGTTCAGGCGGGCGTGGAGAGGCACCTGCCGCCGCTACTACGCAGCCGCCACCGCGCTGCGGACGGTGTGACCCCGGGCCTGGACGATCAGTACACCGGCTACCCAAGCCCGAGCTCCGCCAACGAGGACGACGGCGCCGCCTCCGATCACCTGCTCTACAGCGAAAGCGACGGGAACGTCAGCCCGCTGGAAAGCAGGAAGAGAGCACGCTCCGGCGCCGCTTCCTCTAGGCACCGTTTGGAGGTGGTCACGGAGCTCGGAGCAGAAGAGCTCCGGTGGTTCTACAAGGAGGACAAAAAAACGTGGAAGCCCTTTGCAGGACACGATTCCCTCAACATCGAGCTAATGTATCGCAAGTTCTGTGAACTAAACCCTGTGGAGCTCGATCAGGACCACAACGAGGACCAGCACCAGGACCAAGAAGGCGCTTCAGCTGCTTTGAGTGAAGAAGGAAAACACGCAGCAGAAGTGATGGACAGAGTGGGGACGTGTGGGCCAGGGTCTGCTGCTGGCCAAGTTGAAGAAGGAGCCTCGGTAGAGGCGCCTGAATCAGCCGGGGAAAGTGATGTGGATGTCAGCATCAGCGTTGAAGCTGTGTGTGTCAGAGGAGGGCTCTACCAGGTGGATGTCAGGGAGATGGAATGTTATCCTGTGTACTGGAATCAACAGGATCGCATCCCTGTGATGAGGGGCCAGTGGTTTATTGATGGGACGTGGATGCCCATGGAGGAGGATGAAAGTGACCTCATTGAGAGAGAGCATCTAACCTCCTTCCGAGGTCAACAGATGCAGGACAGTTTTGAGAACGATGTGGTGGTCAAGACAGTCGACACCAAAGACGCTCTCTCCCACTTCCCTCCTTTCTACCTCCCCTTTCTGTTCAAATGGAGTGGATATCAGACGAGTGCTAAAAGTCACAAGCGAAAGCGTTGCCAAGCCATTCACAGCCTGAAACTGAGCCGGAGCCACGTTGACTGGCACAGTGTTGACGAGGTGTATCTGTACAGTGATGCCACCACCTCAAAGATCGCCCGCACTGTCACGCAGAAGCTGGGATTCTCTAAAGCCTCTAGCAGTGGCACCAGGCTCCATCGAGGATATGTGGAGGAGGCCTCTCTGGAAGACAAGCCCCCTCTGACAACGCATATTGTGTTTGTGGTGCATGGTATTGGGCAGAAGATGGATAAAGATCGCATCATCAAGAACACAGGCATGTTGCGAGAAGCTgtgaggaagatggaggagaaACACTTTGCAGATCACACTGAGGAGCATGTTGAGTTTCTGCCAGTAGAATGGCGCTCCAAACTGGCCTTGGATGGAGATACAGTCGACTCCATCACCCCAGATAAGGTTCGAGGGTTAAGAGACCTGTTGAACAGCAGTGCCATGGACATTATGTACTACACCAGCCCTCTCTACAGAGATGAGATCACTAAAGGGCTGACCCAGGAACTCAATCGCCTTTACGCGCTGTTCTGTTCTCGGAACCCCGAGTTTGAGGAAAAGGGGGGTAAAGTGTCCATCATATCTCACTCACTTGGCTGTGTGATCGCTTATGACATCATGACGGGCTGGGATCCTGTACGCTTCTGCCTTCTGGAACAGCAGGAGCCTGATGAAGAAGAGATGCGCTGGATGAGCTACGAAGAGCGCCATCTGCTGGAGCAAGTGCACCTTACCCGCCAGAGgttacGAGAACTAGAGGATAAACTTCAAGGACTGGAAGCCTCTAAACCTCTTCAACTTCCTGCATTAAAGTTTAAGGTGGAGAACTACTTCTGTATGGGATCTCCTCTGGCAGTGTTTCTGGCCTTGCGAGGAATTCGGCCAGGCAGCACTGGATACCAAGACCACATCATGCCCAAATCTATCTGCAAGCGCCTTTTCAACATCTTCCACCCCACAGACCCAGTGGCCTATCGATTGGAACCTCTTGTATTGAAGCACTATAGCAATATTGCACCTGTCCAAATACACTGGTGTAACACCACCAGCCCTACTCCATATGATGAAATGAAACCCACATTTCTAAACCCTGTGAAAGACCCAGTTTCAGACACAGAGAGCCTTCCCAGCCCCAGCACATCACCTGTAATGAACCGAAGACACTACGGAGAGTCCATCACTAACCTTGGCAAAGCCAGCTTACTGGGTGCAGCCAGCATTGGAAAAGGCATTGGAGGAATGTTGTTCTCACGTTTCTCACGCTCCAGTAGCCAGCCCTCAGGAGTGGATTCTGGGGTGGTAGAGACTGAAGAAAAGAGCCAGTCAGCGTATGGCTTGTCCACCATGTCCCAGTCTACCTCCACCATCATTGACACTGCAGTGGAGATGGAGCATCGCATTGACTTTGAGCTGCGTGAGGGTTTGGTGGAGAGCCGCTACTGGTCAGCAGTCACCTCTCACACAGCCTACTGGACTTCACATGATGTGGCCCTGTTCCTGCTTACCTTCATATACAAATCCCAGAGCTCTTCACAGGCATCTGAGGACAGTCTTGACCCTGAGTAACAAAGACCTGCAAAGTATGAAAGCTCTAAAGCACACTCCTCCTTTCACTTTGCCTCTCATGCAAATGCTTCTTTGTCATACAAAGACTGATCCTCATGCTCCCCTTTGCTTTGGCAAAACCCAACTGCTCGTACTATTAACCCATTATACACAGAAAGCACTAGATTACAGTATAGAGTTTATGTACTGAATCACTCTACAGATATTTTGTAACTCTTGCTGTGTTACTCTGAGCAATGGGTAGGCTGTACCACCCTGTCTTTGACCAGTGGGATCAGTAAGTGAGTTAATAATCTCTGCTACCCAACATCCCTCCATTCAGTCCAGCCCACATTGCTTATGTGGCAGCGGTAACACAATAATAGTTACAGAGCTGACCGTAACAAAGACATGCAAATACAGAAGCCTGAACCTCTCTGTCCCATGAATGTCTATTTGTTCCTCTTGTCCGGATGCCACCTATTTGCACGGATTTTAAGATATATTAACACTCCAGATCATGGATTCCTAAGGAAACGAAGGAAAAGTATGTTTTCATATTGAAGGACATTCACTGAGACATTTTTCAGTGTGGGCTGCaggtttatttattgaggaaaagaAATATTAAGACTTAAGATGCCTGTTTTTACTTCCTGGAGAATACTGGATGTCTTTAttta
>XM_007257407.3
CCTGTGGCTGCGTGAATGCGCGCTCGCGCCCGCCCGCTgtggtgggaaaaaaaacaactcacGGAGGGAGAGCTGTGGGCTTGCGTGCGCCGTGACGTAGGCGGATGGATTACGCGTGCGTGCCAGCGCGAGCCGGCGAGGCGAGCTGTTGTGGAAATGAACGGGTGTATGAAATTCGCGAAGGAAGAGCGAGAGCGGAGCAGATAACAGCAGAGCGGGGCAAAATCTGGAAAGTTCACCCAAAGAAGGTTCTGGTGCGGCGGCAGCGGCTGGGTGGAGGCGGTGGGTCAGCgcggggagggagagagagagcgcggtAGAGAgtcagtgggagagagagaggcagatttTAGGTCTGACAGATTTTAACGGTCGTTTGGTGACGCGGTGTTTTAAAGCCTAGCCTggtagttagttagcttagctagtttcGCTAGCATGGCACGGCTTTCagctaaaatgagctaaaaGCTGGGAAGtttatttagctagctacgAACTATTAACGTTAGCGTTATTGTGCTGATTTAAGGTTTGAGTGTTGATTTATCCAGCTAGTTATTTAGCTTGGTTAAGCTAACTAACACTAGCTAAcccatgttagctagctaactaacctagtTTTATggtaaatattgttattatcgTCTAGCGCTAACTAGAGCTTATGACCGcggtaacctagctaacactgGCTGGCTCGTTCCAGTCGGGGTAGGGAGCAACATTAGCTAACAGCTAGTTAGTAATGAGCAGTTTTACGAGCAAGACTCCATTCGTCAGCCCGCCGCAGAGTCCCGAGAGCCGAGGCTCCTCTCTGGGCAGCAGCAGCGACTGGGACTATGCCAACGATGTGTTCGTCTGCTGCTACGACGAGTCCATCGGCAGGGGGATGCAGGCAGTTCAGGCGGGCGTGGAGAGGCACCTGCCGCCGCTACTACGCAGCCGCCACCGCGCTGCGGACGGTGTGACCCCGGGCCTGGACGATCAGTACACCGGCTACCCAAGCCCGAGCTCCGCCAACGAGGACGACGGCGCCGCCTCCGATCACCTGCTCTACAGCGAAAGCGACGGGAACGTCAGCCCGCTGGAAAGCAGGAAGAGAGCACGCTCCGGCGCCGCTTCCTCTAGGCACCGTTTGGAGGTGGTCACGGAGCTCGGAGCAGAAGAGCTCCGGTGGTTCTACAAGGAGGACAAAAAAACGTGGAAGCCCTTTGCAGGACACGATTCCCTCAACATCGAGCTAATGTATCGCAAGTTCTGTGAACTAAACCCTGTGGAGCTCGATCAGGACCACAACGAGGACCAGCACCAGGACCAAGAAGGCGCTTCAGCTGCTTTGAGTGAAGAAGGAAAACACGCAGCAGAAGTGATGGACAGAGTGGGGACGTGTGGGCCAGGGTCTGCTGCTGGCCAAGTTGAAGAAGGAGCCTCGGTAGAGGCGCCTGAATCAGCCGGGGAAAGTGATGTGGATGTCAGCATCAGCGTTGAAGCTGTGTGTGTCAGAGGAGGGCTCTACCAGGTGGATGTCAGGGAGATGGAATGTTATCCTGTGTACTGGAATCAACAGGATCGCATCCCTGTGATGAGGGGCCAGTGGTTTATTGATGGGACGTGGATGCCCATGGAGGAGGATGAAAGTGACCTCATTGAGAGAGAGCATCTAACCTCCTTCCGAGGTCAACAGATGCAGGACAGTTTTGAGAACGATGTGGTGGTCAAGACAGTCGACACCAAAGACGCCATTCACAGCCTGAAACTGAGCCGGAGCCACGTTGACTGGCACAGTGTTGACGAGGTGTATCTGTACAGTGATGCCACCACCTCAAAGATCGCCCGCACTGTCACGCAGAAGCTGGGATTCTCTAAAGCCTCTAGCAGTGGCACCAGGCTCCATCGAGGATATGTGGAGGAGGCCTCTCTGGAAGACAAGCCCCCTCTGACAACGCATATTGTGTTTGTGGTGCATGGTATTGGGCAGAAGATGGATAAAGATCGCATCATCAAGAACACAGGCATGTTGCGAGAAGCTgtgaggaagatggaggagaaACACTTTGCAGATCACACTGAGGAGCATGTTGAGTTTCTGCCAGTAGAATGGCGCTCCAAACTGGCCTTGGATGGAGATACAGTCGACTCCATCACCCCAGATAAGGTTCGAGGGTTAAGAGACCTGTTGAACAGCAGTGCCATGGACATTATGTACTACACCAGCCCTCTCTACAGAGATGAGATCACTAAAGGGCTGACCCAGGAACTCAATCGCCTTTACGCGCTGTTCTGTTCTCGGAACCCCGAGTTTGAGGAAAAGGGGGGTAAAGTGTCCATCATATCTCACTCACTTGGCTGTGTGATCGCTTATGACATCATGACGGGCTGGGATCCTGTACGCTTCTGCCTTCTGGAACAGCAGGAGCCTGATGAAGAAGAGATGCGCTGGATGAGCTACGAAGAGCGCCATCTGCTGGAGCAAGTGCACCTTACCCGCCAGAGgttacGAGAACTAGAGGATAAACTTCAAGGACTGGAAGCCTCTAAACCTCTTCAACTTCCTGCATTAAAGTTTAAGGTGGAGAACTACTTCTGTATGGGATCTCCTCTGGCAGTGTTTCTGGCCTTGCGAGGAATTCGGCCAGGCAGCACTGGATACCAAGACCACATCATGCCCAAATCTATCTGCAAGCGCCTTTTCAACATCTTCCACCCCACAGACCCAGTGGCCTATCGATTGGAACCTCTTGTATTGAAGCACTATAGCAATATTGCACCTGTCCAAATACACTGGTGTAACACCACCAGCCCTACTCCATATGATGAAATGAAACCCACATTTCTAAACCCTGTGAAAGACCCAGTTTCAGACACAGAGAGCCTTCCCAGCCCCAGCACATCACCTGTAATGAACCGAAGACACTACGGAGAGTCCATCACTAACCTTGGCAAAGCCAGCTTACTGGGTGCAGCCAGCATTGGAAAAGGCATTGGAGGAATGTTGTTCTCACGTTTCTCACGCTCCAGTAGCCAGCCCTCAGGAGTGGATTCTGGGGTGGTAGAGACTGAAGAAAAGAGCCAGTCAGCGTATGGCTTGTCCACCATGTCCCAGTCTACCTCCACCATCATTGACACTGCAGTGGAGATGGAGCATCGCATTGACTTTGAGCTGCGTGAGGGTTTGGTGGAGAGCCGCTACTGGTCAGCAGTCACCTCTCACACAGCCTACTGGACTTCACATGATGTGGCCCTGTTCCTGCTTACCTTCATATACAAATCCCAGAGCTCTTCACAGGCATCTGAGGACAGTCTTGACCCTGAGTAACAAAGACCTGCAAAGTATGAAAGCTCTAAAGCACACTCCTCCTTTCACTTTGCCTCTCATGCAAATGCTTCTTTGTCATACAAAGACTGATCCTCATGCTCCCCTTTGCTTTGGCAAAACCCAACTGCTCGTACTATTAACCCATTATACACAGAAAGCACTAGATTACAGTATAGAGTTTATGTACTGAATCACTCTACAGATATTTTGTAACTCTTGCTGTGTTACTCTGAGCAATGGGTAGGCTGTACCACCCTGTCTTTGACCAGTGGGATCAGTAAGTGAGTTAATAATCTCTGCTACCCAACATCCCTCCATTCAGTCCAGCCCACATTGCTTATGTGGCAGCGGTAACACAATAATAGTTACAGAGCTGACCGTAACAAAGACATGCAAATACAGAAGCCTGAACCTCTCTGTCCCATGAATGTCTATTTGTTCCTCTTGTCCGGATGCCACCTATTTGCACGGATTTTAAGATATATTAACACTCCAGATCATGGATTCCTAAGGAAACGAAGGAAAAGTATGTTTTCATATTGAAGGACATTCACTGAGACATTTTTCAGTGTGGGCTGCaggtttatttattgaggaaaagaAATATTAAGACTTAAGATGCCTGTTTTTACTTCCTGGAGAATACTGGATGTCTTTAttta

Function

symbol description
ddhd1 Predicted to enable phospholipase activity. Acts upstream of or within positive regulation of mitochondrial fission. Predicted to be located in cytosol. Predicted to be active in cytoplasm. Implicated in hereditary spastic paraplegia 28.

NR:

description
PREDICTED: phospholipase DDHD1 isoform X1

GO: NA

KEGG:

id description
K13619 DDHD1; phospholipase DDHD1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257406.3 True 4082 mRNA 0.51 14 26693418 26716015
XM_007257407.3 False 3981 mRNA 0.51 13 26693423 26716015

Neighbor

gene id symbol gene type direction distance location
bmp4 bmp4 coding upstream 79654 26604718 ~ 26613764 (+)
snx14 snx14 coding upstream 186906 26488033 ~ 26506512 (+)
LOC103026145 LOC108270054,LOC108423543 coding upstream 208796 26474775 ~ 26484622 (+)
LOC103029223 akirin2,LOC100499587,LOC100379102 coding upstream 259226 26425098 ~ 26434192 (+)
ptpn21 ptpn21 coding upstream 273108 26401087 ~ 26420310 (+)
stxbp6 stxbp6 coding downstream 79793 26795808 ~ 26897068 (+)
c9h15orf41 cunh15orf41,c9h15orf41,cssa01h15orf41,clg19h15orf41,LOC105897278 coding downstream 712737 27428752 ~ 27506291 (+)
spred1 spred1 coding downstream 1054778 27770793 ~ 27813908 (+)
LOC103043868 atxn3,LOC108423524,LOC106596382,LOC107575702,LOC107683100 coding downstream 1132662 27848677 ~ 27855382 (+)
LOC103042318 LOC103042318,LOC108423523 coding downstream 1139726 27855741 ~ 27858741 (+)
LOC111193231 NA non-coding upstream 127574 26507339 ~ 26565844 (+)
trnay-gua_9 NA non-coding upstream 185293 26508040 ~ 26508125 (+)
G83672 NA non-coding upstream 270357 26422514 ~ 26423061 (+)
G83663 NA non-coding upstream 353146 26339831 ~ 26340272 (+)
G83661 NA non-coding upstream 353719 26339182 ~ 26339699 (+)
G83760 NA non-coding downstream 2963 26718978 ~ 26719365 (+)
G83759 NA non-coding downstream 3620 26719635 ~ 26723005 (+)
G83761 NA non-coding downstream 8324 26724339 ~ 26724613 (+)
LOC111193232 NA non-coding downstream 188866 26904881 ~ 26924218 (+)
G83785 NA non-coding downstream 331531 27047546 ~ 27054268 (+)
spata7 NA other upstream 294151 26392890 ~ 26399267 (+)
LOC103031022 LOC103031022,LOC108423548 other upstream 366080 26321185 ~ 26327338 (+)
c9h14orf132 csgr16h14orf132,LOC108423442,LOC108269530,LOC108413331,LOC107582175 other upstream 388035 26275001 ~ 26305383 (+)
G83602 NA other upstream 439816 26235498 ~ 26253602 (+)
LOC103033015 LOC108423550,LOC108270308 other upstream 718135 25919557 ~ 25975283 (+)
fermt2 fermt2 other downstream 11808 26727823 ~ 26777488 (+)
fam98b NA other downstream 1099790 27815805 ~ 27822211 (+)
LOC103044189 LOC108423527,LOC107677688 other downstream 1108241 27824256 ~ 27831584 (+)
LOC107197841 NA other downstream 2254249 28970264 ~ 28970839 (+)
LOC103045392 NA other downstream 2283487 28999502 ~ 29025114 (+)

Expression


Co-expression Network