fam181a (fam181a)


Basic Information

Item Value
gene id fam181a
gene name fam181a
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 27894955 ~ 27897940 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257459.3
TCAGCTCGTTTCAAGTGGTTAAACCGttccagagagagggagagcgaagCAAGCCTGGGAGCTTTACTAAAATAACTGGTTCGTAAATCACGTCAACGGAATGGATTAAAACCAATTTGTCaaactggaaataaaaaagaaagcatgGCCAGCTCTGACAGTGAGGTAAAAACGTTGCTGAACTTTGTGAACTTGGCATCAAGCGACATCAAGGCAGCCCTGGATAAGTCCGCCCCGTGCAGGCGCTCCGTGGATCACCGCAAGTACCTGCAGAAGCAGCTGAAGCGCTTCTCTCAGAAGTACTCCAGGATGCCCCGCTGCCACGCGCATCGAGCCCCCGACTCTGCCCCCAAACCCATCGAGGACAAGCCCACCCCGCTCACGCACGAGAGCCCCGCGTTCCTCCCCCACCTGACCGAAAAGCGGGAGCCACGCGCAGAGCGCCTGGACCCAAACCCCGACCGGGAAGAGGACCCATCCCGCGCGGGACAGCTGCCCATGCGCAAGCGGCAGCTCCCGGCCTCATTCTGGGAAGAACCCCGCGCTCCTCACGGCGCGCACCCGTGTTTTCACCACGCGTGGAAGAGGAGAGCACACGCGGGGACTCGCACGCAGAGAGAGTCCGGCGGAGATGAGCGAGCAGCCGACCTGCTGCCCCCTGCCCGCCGCGGCTCTCCGGACCTGGAGCCGCTCAGAGTGGCGCTCACGTGTGGGTGCGCTCCGTTCCAGTACCGCGGGTCCCAGGCTCtccacacacacgcgcacacgcaCCTCCTGCTGCCCCAGGCCAGTCTCGCCCACGTGGGTCTCAGGACCAAAATCGGCGGAACTGAACTGGACATGCAGAAAGTTCCGGACGCTCTTAAAAACAGCACAACTCACGTGGTGGTGAAACCGATTCCCACTAAACCGGTTTCAACTtctattttcagtgttttcggGTTCATTTAGACCGGTTTAAGTGTGAATTAACTAGACATAATTGGAAACATTTGaactataaacaatataaaatacacatacataccCAGCTTCCCTTTCTGGTTCCCAGAACATTCGTTTTTTATTGAAACTATGTAGTTTCTGGCTGGATAAGCATTACAGTTTTTGTAACATTCTCAAAATGTTTTCATAATCCTAATCTTGTGACATCAGTTGTGTAAagcttggaaaaaaaatgttttaatgttgtgggaTCATAAGAAAAGATTACATGAACGTAAGAATATACACATGGGGTATATAACTTTATGGTTTCCAATGAAATAACTATAGAGGAATCTGTATAAGCtgggtgtatatgtgtataaaagGCTGTTCTGGAAGTTTCATGCAGTGGTTAAGAGCAGGGATGCACAATATTGCGAGGAAAAAACAGACAttgcattattttatcattGCACTACACACATGTTGACCAATTTGACCTAAATTGATTAATCCAActtgtcatgataataataacttGCACTGTGTTGAGGACTGGAGACAATTAATTGATATTGGGCAGATAAatgagaaaagtaaaaaaaaaaaaacattttgttagaCAAGCTGTAGAATGACCTGTATGACTTAAATTTGGCTTCCTTGTAAATGCAAGTCCTGCGAAGTCCCGTCGATGCTCcaacgatatattgtgcagccctatttGAGATGTAACATCACTGGATATATTCTTAATGGTTTCATGTAATTGCTTATATGAGATGCATACTTTTGAATATCTGACTCCTGTTTCCACCACTATGAACAATTCTGGTGTATTTCACAACAAACTACTCTTAAGATACATTGTTTACATCCTAACAGTTTAATTATGCAGATATTTTGAGAAATCATCTGCATTGCTCTCCAAGTTTAAATTCCTGCATTGTTAAATTTGTAATTGTTTTGAAATAGGCCTTAGGCCAACCAATTTCTGATTAAGCACTTAaaagcacaaataaataaatgtagcaaACACAAATCCAGCTATAGTAGCTTGTTACTGAGGCAGTGTGTGTCCGTGCTCTTGCCTTACCCTGAGACCCTGTTTTAGAAAAAGTAATTAATGTCTAATATTAGCCTCTGTGATAATAGCACTGAGTATAACTAACCCATTTTGCTGTAGTTATTTATGAGCACccatcctgttttttttcatgctgttTTTAAGGATCTGTGATGTCAGTGATATTTCAAAATAGAGACCAGCCATGTCAGGATTTGAGTTAATGCAACTATCTATTCACCCTGTTTAAGGAAATATCATTTTTGTTTGGGCAAAAACTTGGATGTCCAAAATGGCAACTCACAGAAGATGAAGAAAaacttaactttcaatggaagtgaatgtaaaaaagacattttggtCCATTCGACACTTTTGTGAAGAAATTACCTTACGTCagaaatgaaaaacatgaaaactggAAATACAAGGTTTTCACAAAACAGTTATGATATTTAAGCACTTAGATATATTCACGATGACTAGGATATGCTACATCAAATGACCTAGaatcagtaaaacagtaaaagaatctcagtttattttca

Function

symbol description
fam181a Orthologous to human FAM181A (family with sequence similarity 181 member A).

NR:

description
protein FAM181A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257459.3 True 2541 mRNA 0.43 2 27894955 27897940

Neighbor

gene id symbol gene type direction distance location
LOC103043263 NA coding downstream 14640 27875148 ~ 27880315 (-)
otub2 otub2,ddx24 coding downstream 21249 27865545 ~ 27873706 (-)
LOC111193234 NA coding downstream 259548 27632645 ~ 27635407 (-)
meis2 meis2 coding downstream 286313 27526742 ~ 27608642 (-)
dph6 dph6,LOC106512485 coding downstream 466154 27148597 ~ 27428801 (-)
unc79 NA coding upstream 30614 27928554 ~ 27997121 (-)
LOC103039744 NA coding upstream 174919 28072859 ~ 28079529 (-)
LOC103037016 LOC103037016 coding upstream 188444 28086384 ~ 28090632 (-)
zc2hc1c NA coding upstream 216633 28114573 ~ 28119005 (-)
erg28 cunh14orf1,gb:ev754742,c9h14orf1,LOC103034519,LOC107724257,LOC107554785,LOC103358042 coding upstream 279841 28177781 ~ 28180984 (-)
G84064 LOC103042318,LOC108423523 non-coding downstream 35795 27856275 ~ 27859160 (-)
G84063 NA non-coding downstream 39571 27853356 ~ 27855384 (-)
G84045 NA non-coding downstream 75091 27815850 ~ 27819864 (-)
G83973 NA non-coding downstream 190067 27704226 ~ 27704888 (-)
G83957 NA non-coding downstream 280247 27613245 ~ 27614708 (-)
G84083 NA non-coding upstream 100644 27998584 ~ 28005722 (-)
G84109 NA non-coding upstream 162077 28060017 ~ 28114357 (-)
G84107 LOC108423515 non-coding upstream 169276 28067216 ~ 28072498 (-)
G84197 NA non-coding upstream 368230 28266170 ~ 28267487 (-)
G84229 NA non-coding upstream 523044 28420984 ~ 28424692 (-)
LOC103043566 LOC108423527,LOC108270165,LOC100330554,LOC107677688,LOC103153288,LOC103458816,LOC106945627,LOC103355980,LOC102293757 other downstream 46511 27830628 ~ 27848444 (-)
cga cga other downstream 1424792 26434472 ~ 26470163 (-)
G83612 NA other downstream 1891270 25992499 ~ 26003685 (-)
LOC103040243 tdh,LOC103040243,LOC108441731,LOC107561940,LOC107723287,LOC107589050,LOC107701506,LOC107746115,LOC105018021,LOC104922441 other downstream 2853901 25034004 ~ 25041054 (-)
LOC103026430 LOC108428707,LOC108269919,LOC107102228,LOC103379330,LOC101162185 other downstream 3259074 24630879 ~ 24635881 (-)
G84215 NA other upstream 446649 28344589 ~ 28356545 (-)
rps6kl1 rps6kl1 other upstream 777658 28675598 ~ 28694982 (-)
G84392 NA other upstream 1177536 29075476 ~ 29076115 (-)
G84579 nol10 other upstream 1910589 29808529 ~ 29810277 (-)
hpcal1 hpcal1,hpca,LOC107565203,LOC107702105,LOC107556378,LOC106607246 other upstream 1961037 29858977 ~ 29930575 (-)

Expression


Co-expression Network