LOC103041211 (LOC103041211,LOC108423415)


Basic Information

Item Value
gene id LOC103041211
gene name LOC103041211,LOC108423415
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 26351131 ~ 26352435 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257461.3
CAGCATGACCTTAAACAGCTCAATGAACGAGACTTTGTGTACATTTAATGACACTGTGGATGCCAGTATGTATCCTACTGCCTACTCTCTGTTTTTCATCCTTGGACTTCCAGGTAACTGCCTATCCTTGTACGTTGCTTGGATTCTAATGCGTAGAGGGAACAGCCTGGCTGTGTATTTGGTGAACCTGTCCGTGTCTGACCTGCTCTACACCATCAGCCTGCCTGTATGGATCATACTCGCACAGAAGCAGCCAGTGGATGACACCCTCTGCAGCCTCATCGACGTGATCATGTTCAACAGCTTCTATGTGGGTTCGGGCCTGCTGTGCTGTATCTCTATGGACCGGTACCTTGCTGTGGTCTTCCCTCTGTACTTTAATTCAGTGCATAAGGTGCGCACCGCTGCACTGGTGAGCCTGTTAGTATGGATGATGGAGATTTCTTTGCAAGTTGGGCTCCTGGTGTACACAGGGGACCTGCAGAATTTCTCAGCTGCACGCCTGTGTGCCATCAGCGAATCCATGAGCAGAAAGCAGGCCCACGTGGCTATAATCCGAGTGGTGCTGGGATTTCTCATACCTGTGCTCTTGATGGCTTTCTGCTTCCAGCAGATCATCATGTCTCTCCGAGCAAGCACTTCCACATTGGCCAGCGAGCGCAGGAAGATCCGCaacctgctgctgcttctcctaCTCGTCTACCTGGTGTCCTTCGCCCCCTTTCAGATTGTCATGTTCCTACGAGGCCTGTTGGAGCCTGACAGCTGCAGCGCTGCCAGACGTCTGAGAGACTACTATATGGTGTTTGTTGCGACTACGACAATTAACAGTGTGGCAGATCCAGTTGTTTACTGCTTGTTGAGTGAGAGTGCAAAGACAGAGCTTAAAAGGGTGTTCAATAAGTGTGAGAATAAATTCAGCAGATTCAGTTTTCTAAAGAAGTCTGCACCAACTTCAACTACAGTTTAACAGCATGTtcagctgtgtatgtgtgtgtgcgtgtgtttcaACAACAGTACTTGTGTCTTATTTTAAGATTACATATTGACTGCCATCTTCTTTATCCTGTTTTGAAACCTCTTGCTCATCATCTGACCTGGGTTATGACAAAATCATTCATTGTGTACAGTAAAATTGTACAACTTACTTGCAAACCGCACACAGTCTTTTCAACTCatgcttttctttattaatatgtattttaaacataatttaagaaaaaatgtgaGAACATGTATGTACAAATTGTGTATTAgaaactattatactattaaatataagtaTGTGTAAACTTCAAGTCACAA

Function

NR:

description
ovarian cancer G-protein coupled receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257461.3 True 1305 mRNA 0.45 1 26351131 26352435

Neighbor

gene id symbol gene type direction distance location
LOC103041516 NA coding upstream 15308 26331927 ~ 26335823 (+)
LOC103041814 LOC108423416 coding upstream 20175 26328801 ~ 26330956 (+)
LOC103033987 plcb1,LOC103033987,LOC108423552,LOC107663155,LOC107678738 coding upstream 434287 25835140 ~ 25916844 (+)
LOC103021856 bmp2,LOC108414145,LOC108270435 coding upstream 626222 25718474 ~ 25724909 (+)
gdf3 gdf3 coding upstream 633685 25715058 ~ 25717446 (+)
LOC103030701 NA coding downstream 5344 26357779 ~ 26360746 (+)
ptpn21 ptpn21 coding downstream 48652 26401087 ~ 26420310 (+)
LOC103029223 akirin2,LOC100499587,LOC100379102 coding downstream 72663 26425098 ~ 26434192 (+)
LOC103026145 LOC108270054,LOC108423543 coding downstream 122340 26474775 ~ 26484622 (+)
snx14 snx14 coding downstream 135598 26488033 ~ 26506512 (+)
G83663 NA non-coding upstream 10859 26339831 ~ 26340272 (+)
G83661 NA non-coding upstream 11432 26339182 ~ 26339699 (+)
G83649 NA non-coding upstream 40183 26310709 ~ 26310948 (+)
G83601 NA non-coding upstream 115956 26234916 ~ 26235175 (+)
LOC111193229 NA non-coding upstream 358119 25984681 ~ 25993012 (+)
G83672 NA non-coding downstream 70079 26422514 ~ 26423061 (+)
LOC111193231 NA non-coding downstream 154904 26507339 ~ 26565844 (+)
trnay-gua_9 NA non-coding downstream 155605 26508040 ~ 26508125 (+)
G83760 NA non-coding downstream 366543 26718978 ~ 26719365 (+)
G83759 NA non-coding downstream 367200 26719635 ~ 26723005 (+)
LOC103031022 LOC103031022,LOC108423548 other upstream 23793 26321185 ~ 26327338 (+)
c9h14orf132 csgr16h14orf132,LOC108423442,LOC108269530,LOC108413331,LOC107582175 other upstream 45748 26275001 ~ 26305383 (+)
G83602 NA other upstream 97529 26235498 ~ 26253602 (+)
LOC103033015 LOC108423550,LOC108270308 other upstream 375848 25919557 ~ 25975283 (+)
supt3h supt3h other upstream 1021649 25160918 ~ 25329482 (+)
spata7 NA other downstream 40455 26392890 ~ 26399267 (+)
fermt2 fermt2 other downstream 375388 26727823 ~ 26777488 (+)
fam98b NA other downstream 1463370 27815805 ~ 27822211 (+)
LOC103044189 LOC108423527,LOC107677688 other downstream 1471821 27824256 ~ 27831584 (+)
LOC107197841 NA other downstream 2617829 28970264 ~ 28970839 (+)

Expression


Co-expression Network