kdm1a (kdm1a)


Basic Information

Item Value
gene id kdm1a
gene name kdm1a
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 5179637 ~ 5202441 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007258933.3
GCCACTGCCCGGCGCACGCACTGCTCCGTGGTTCCTTTGTGCCGGACGGTAGCAGaagagCGTGTGAATGGATATTTCCCGCTGCACCGAGAAATggGAGAGGCCACTGTCTTCCTCCATTATGCTGGCGAATAAGAAAGACTCCGccccctcctcctcatcctcctcctcctctggagGTAACGGTGTTGAACGCTCATTGGACGCTCCAGCCGGCCCGGCCCCTGGCCCTGCTGGTCCCGCTCCAGGCCCTGCCGACGTCAAAAAGAAGGAGAGGGCATCTCCGAGTGGCGAGGGTGGCGGCCCGCCCCTCCCGCACCCTCCCGGTCCAGGGGGCATCGACCAGGACTCTGCTGAAGGGCGACGGACCAGCCGCCGGAAGCGAGCCAAACAGGTGGAGTACAGAGAGATGGACGAGAGCCTGGCTAACCTGTCGGAGGACGAGTATTActcagaggaggagaggaacgCTAAAGCAGAAAAAGAGCGCAAACAGGTGGTGCCCCCACCCGCCCCTccagtggaggaggagaacgaCAGCGAGCCAGACGAGCCGTCAGGTTTGGAGGGCGCAGCTTTCCAGAGCCGCCTTCCACACGATCGAATGACGTCCCAGGAAGCTGCGTGTTTCCCTGACATTATTAATGGACCACAACAAACGCAGAAGGTTTTCCTGTACATCCGGAACCGCACACTCCAGCTGTGGTTGGATAACCCAAAAGTCCAGCTCACCTTCGAGTCTACTGTTCAGCAGCTGGAGGCTCCATACAACAGTGATGCCGTTCTGGTGCACAGAATTCACAGTTACCTGGAGAGACACGGCCTTATCAACTTCGGAATCTACAAACGCGTCAAACCACTACCCAgcaAGAAAACAGGGAAGGTGATTGTGATTGGTGGGGGTGTGTCAGGTTTGGCGGCGGCGAGGCAGCTGCAGAGTTTCGGCATGGATGTCACAGTGCTGGAGGCCAGGGACCGTGTGGGAGGAAGAGTGGCCACTTTCCGTAAAGGGAACTATGTAGCAGACCTGGGGGCAATGGTGGTGACTGGCCTGGgtgGGAACCCCATGGCTGTGGTCAGTAAGCAAGTCAATATGGAGTTGgccaaaatcaaacaaaagtgTCCGCTATATGAGGCTAATGGCCAGGCTggaGAACGCTGCACAAGTgttcCTAAGGAGAAGGACGAGATGGTGGAGCAGGAGTTTAACAGACTGCTGGAGGCCACGTCGTTCCTCAGTCACCAGCTGGACTTCAACTTCCTCAATAACAAACCTGTTTCTCTGGGTCAGGCACTGGAGGTCGTCATACAgctcCAGGAAAAGCATGTGAAAGATGAACAGATAGAGCACTGGAAGAAGATAGTAAAGACCCAGGAGGAGCTCAAAGAGCTGCTTAATAAGaTGGTTGCCACTAAAGAGAAGGTGAAGGAGCTTCACCAGCAGTATAAAGAGGCCAGTGAGGTGAAACCTCCCAGAGATATCACTGCAGAGTTTctagttaaaagtaaacatCGGGATCTCACAGCTCTCTGCAAGGATTATGATGCGCTGGCTGAGCAGCAGGCTAAACTGGAAGAGAGGCTACAGGAGCTTGAAGCAAATCCACCCAGtgatGTGTATCTGTCGTCTAGAGATCGGCAGATACTGGACTGGCACTTTGCTAATCTGGAGTTTGCTAATGCCACACCCCTCTCTACTCTCTCCCTCAAACACTGGGATCAGgatgaTGATTTTGAGTTCACAGGAAGTCACCTGACTGTGCGAAACGGTTACTCCTGCGTTCCTGTGGCTCTGGCTGAGGGTTTGGACATTAAACTCAACACGGCTGTCCGGCAGGTGCGCTACACCTCATCAGgctgtgAGGTAATAGCGGTGAACACTCGCTCCACCACTCAGACGTTTATTTATAAGTGTGATGCGGTGTTGTGCACCCTGCCGCTGGGGGTGATGAAGCAGCAGCCGCCTGCCGTGCAGTTCGTCCCACCACTGCCCGAGTGGAAAACATCCGCCATCCAGAGGATGGGCTTTGGAAACCTCaacaagGTGGTGCTGTGTTTTGACCGTGTGTTCTGGGACCCCAGTGTGAATCTGTTCGGCCATGTTGGGAGCACCACTGCCAGCCGCGGGGAACTGTTTCTGTTCTGGAACCTTTACAAAGCCCCCATCCTGCTGGCCCTGATGGCTGGAGAAGCGGCGGGCATTATGGAGAACATTAGCGATGACGTCATTGTGGGCCGTTGCCTAGCGATTCTGAAGGGCATCTTTGGCAGCAGTGCAGTTCCTCAGCCGAAGGAGACGGTGGTGACGCGCTGGCGTGCGGACCCCTGGGCTCGAGGCTCGTACTCGTACGTGGCAGCCGGCTCCTCCGGAAACGACTATGACCTGATGGCCCAGCCCATCACACCTGGACCAGCTATACCTGGAGCATCACAGCCGGTGCCGCGTCTCTTCTTCGCCGGAGAACACACGATCCGGAACTATCCAGCTACAGTACACGGAGCCCTGCTGAGCGGCCTGAGGGAAGCCGGACGCATCGCTGACCAGTTCCTGGGAGCCATGTACACACTGCCTAgacaaaacacaaatacagcCAACGCACAGCCCTCACCCAgcgtttaaacacacacacacacacacacacactccaacctGCAATCATGAACTACCGTGAAGAGCAGGTGTGTTTACCTGGACGCTCCAGCTCAGTTTATCTGCTTAAACACACTGAACCTTCAGTCAGGTGTGTTTGAACAGGTAAAGCACTGTGCTGGAATATGACtggacacacatatatacacacacacacacacacaccacacacacacatatatatacacacacacacacactcttacagaTTGTATAGCTCATACACAGtaacatttaatttacatatttacaaacttgaaaacactgtgtaactgtacactgtacacacacactataatacacacagtacacatgAGTATTGTACAgttgctgtttgtgtgtgtgtgtgtaggggggtgCCCACAGTGCCCACCCCCCCAAAACCGATGACACACTTCTTCTCCACTACTCTGTGTACAGCAGTGCTCTcagactcctcctcctccatatAGTATAAACTCACAGCTCTGAACTCTGATTAAAACCCAGCTGTGGCTGAGGTGGAGAAGTGAGGCTGAGAGGAACAGAGGTGTGGTAGATTACCCCGTCAGTGTGAGCTCTGAATTCTGCTGATCtccacttttttcttttgttgttcacCTCTAGATGAGTTTAGCTGAAGATGGAGAAACAGTAGCTGCTTaagtaaagcttttttttttttttttggaaatatgaAAAGTGTCGTTTTGCATTAagctaaatgtgttttttgttctgtagctttattttatatcattCTTATTTTTGTcaagtttttatattttgtggGAATTTGGTATTAAATGGAGACAAGAAGACTA
>XM_007258935.3
tgttccCCAGCCACTGCCCGGCGCACGCACTGCTCCGTGGTTCCTTTGTGCCGGACGGTAGCAGaagagGAGAGGCCACTGTCTTCCTCCATTATGCTGGCGAATAAGAAAGACTCCGccccctcctcctcatcctcctcctcctctggagGTAACGGTGTTGAACGCTCATTGGACGCTCCAGCCGGCCCGGCCCCTGGCCCTGCTGGTCCCGCTCCAGGCCCTGCCGACGTCAAAAAGAAGGAGAGGGCATCTCCGAGTGGCGAGGGTGGCGGCCCGCCCCTCCCGCACCCTCCCGGTCCAGGGGGCATCGACCAGGACTCTGCTGAAGGGCGACGGACCAGCCGCCGGAAGCGAGCCAAAGTGGAGTACAGAGAGATGGACGAGAGCCTGGCTAACCTGTCGGAGGACGAGTATTActcagaggaggagaggaacgCTAAAGCAGAAAAAGAGCGCAAACAGGTGGTGCCCCCACCCGCCCCTccagtggaggaggagaacgaCAGCGAGCCAGACGAGCCGTCAGGTTTGGAGGGCGCAGCTTTCCAGAGCCGCCTTCCACACGATCGAATGACGTCCCAGGAAGCTGCGTGTTTCCCTGACATTATTAATGGACCACAACAAACGCAGAAGGTTTTCCTGTACATCCGGAACCGCACACTCCAGCTGTGGTTGGATAACCCAAAAGTCCAGCTCACCTTCGAGTCTACTGTTCAGCAGCTGGAGGCTCCATACAACAGTGATGCCGTTCTGGTGCACAGAATTCACAGTTACCTGGAGAGACACGGCCTTATCAACTTCGGAATCTACAAACGCGTCAAACCACTACCCAgcaAGAAAACAGGGAAGGTGATTGTGATTGGTGGGGGTGTGTCAGGTTTGGCGGCGGCGAGGCAGCTGCAGAGTTTCGGCATGGATGTCACAGTGCTGGAGGCCAGGGACCGTGTGGGAGGAAGAGTGGCCACTTTCCGTAAAGGGAACTATGTAGCAGACCTGGGGGCAATGGTGGTGACTGGCCTGGgtgGGAACCCCATGGCTGTGGTCAGTAAGCAAGTCAATATGGAGTTGgccaaaatcaaacaaaagtgTCCGCTATATGAGGCTAATGGCCAGGCTggaGAACGCTGCACAAGTgttcCTAAGGAGAAGGACGAGATGGTGGAGCAGGAGTTTAACAGACTGCTGGAGGCCACGTCGTTCCTCAGTCACCAGCTGGACTTCAACTTCCTCAATAACAAACCTGTTTCTCTGGGTCAGGCACTGGAGGTCGTCATACAgctcCAGGAAAAGCATGTGAAAGATGAACAGATAGAGCACTGGAAGAAGATAGTAAAGACCCAGGAGGAGCTCAAAGAGCTGCTTAATAAGaTGGTTGCCACTAAAGAGAAGGTGAAGGAGCTTCACCAGCAGTATAAAGAGGCCAGTGAGGTGAAACCTCCCAGAGATATCACTGCAGAGTTTctagttaaaagtaaacatCGGGATCTCACAGCTCTCTGCAAGGATTATGATGCGCTGGCTGAGCAGCAGGCTAAACTGGAAGAGAGGCTACAGGAGCTTGAAGCAAATCCACCCAGtgatGTGTATCTGTCGTCTAGAGATCGGCAGATACTGGACTGGCACTTTGCTAATCTGGAGTTTGCTAATGCCACACCCCTCTCTACTCTCTCCCTCAAACACTGGGATCAGgatgaTGATTTTGAGTTCACAGGAAGTCACCTGACTGTGCGAAACGGTTACTCCTGCGTTCCTGTGGCTCTGGCTGAGGGTTTGGACATTAAACTCAACACGGCTGTCCGGCAGGTGCGCTACACCTCATCAGgctgtgAGGTAATAGCGGTGAACACTCGCTCCACCACTCAGACGTTTATTTATAAGTGTGATGCGGTGTTGTGCACCCTGCCGCTGGGGGTGATGAAGCAGCAGCCGCCTGCCGTGCAGTTCGTCCCACCACTGCCCGAGTGGAAAACATCCGCCATCCAGAGGATGGGCTTTGGAAACCTCaacaagGTGGTGCTGTGTTTTGACCGTGTGTTCTGGGACCCCAGTGTGAATCTGTTCGGCCATGTTGGGAGCACCACTGCCAGCCGCGGGGAACTGTTTCTGTTCTGGAACCTTTACAAAGCCCCCATCCTGCTGGCCCTGATGGCTGGAGAAGCGGCGGGCATTATGGAGAACATTAGCGATGACGTCATTGTGGGCCGTTGCCTAGCGATTCTGAAGGGCATCTTTGGCAGCAGTGCAGTTCCTCAGCCGAAGGAGACGGTGGTGACGCGCTGGCGTGCGGACCCCTGGGCTCGAGGCTCGTACTCGTACGTGGCAGCCGGCTCCTCCGGAAACGACTATGACCTGATGGCCCAGCCCATCACACCTGGACCAGCTATACCTGGAGCATCACAGCCGGTGCCGCGTCTCTTCTTCGCCGGAGAACACACGATCCGGAACTATCCAGCTACAGTACACGGAGCCCTGCTGAGCGGCCTGAGGGAAGCCGGACGCATCGCTGACCAGTTCCTGGGAGCCATGTACACACTGCCTAgacaaaacacaaatacagcCAACGCACAGCCCTCACCCAgcgtttaaacacacacacacacacacacacactccaacctGCAATCATGAACTACCGTGAAGAGCAGGTGTGTTTACCTGGACGCTCCAGCTCAGTTTATCTGCTTAAACACACTGAACCTTCAGTCAGGTGTGTTTGAACAGGTAAAGCACTGTGCTGGAATATGACtggacacacatatatacacacacacacacacacaccacacacacacatatatatacacacacacacacactcttacagaTTGTATAGCTCATACACAGtaacatttaatttacatatttacaaacttgaaaacactgtgtaactgtacactgtacacacacactataatacacacagtacacatgAGTATTGTACAgttgctgtttgtgtgtgtgtgtgtaggggggtgCCCACAGTGCCCACCCCCCCAAAACCGATGACACACTTCTTCTCCACTACTCTGTGTACAGCAGTGCTCTcagactcctcctcctccatatAGTATAAACTCACAGCTCTGAACTCTGATTAAAACCCAGCTGTGGCTGAGGTGGAGAAGTGAGGCTGAGAGGAACAGAGGTGTGGTAGATTACCCCGTCAGTGTGAGCTCTGAATTCTGCTGATCtccacttttttcttttgttgttcacCTCTAGATGAGTTTAGCTGAAGATGGAGAAACAGTAGCTGCTTaagtaaagcttttttttttttttttggaaatatgaAAAGTGTCGTTTTGCATTAagctaaatgtgttttttgttctgtagctttattttatatcattCTTATTTTTGTcaagtttttatattttgtggGAATTTGGTATTAAATGGAGACAAGAAGACTA
>XM_015608289.2
GCCACTGCCCGGCGCACGCACTGCTCCGTGGTTCCTTTGTGCCGGACGGTAGCAGaagagCGTGTGAATGGATATTTCCCGCTGCACCGAGAAATggGAGAGGCCACTGTCTTCCTCCATTATGCTGGCGAATAAGAAAGACTCCGccccctcctcctcatcctcctcctcctctggagGTAACGGTGTTGAACGCTCATTGGACGCTCCAGCCGGCCCGGCCCCTGGCCCTGCTGGTCCCGCTCCAGGCCCTGCCGACGTCAAAAAGAAGGAGAGGGCATCTCCGAGTGGCGAGGGTGGCGGCCCGCCCCTCCCGCACCCTCCCGGTCCAGGGGGCATCGACCAGGACTCTGCTGAAGGGCGACGGACCAGCCGCCGGAAGCGAGCCAAAGTGGAGTACAGAGAGATGGACGAGAGCCTGGCTAACCTGTCGGAGGACGAGTATTActcagaggaggagaggaacgCTAAAGCAGAAAAAGAGCGCAAACAGGTGGTGCCCCCACCCGCCCCTccagtggaggaggagaacgaCAGCGAGCCAGACGAGCCGTCAGGTTTGGAGGGCGCAGCTTTCCAGAGCCGCCTTCCACACGATCGAATGACGTCCCAGGAAGCTGCGTGTTTCCCTGACATTATTAATGGACCACAACAAACGCAGAAGGTTTTCCTGTACATCCGGAACCGCACACTCCAGCTGTGGTTGGATAACCCAAAAGTCCAGCTCACCTTCGAGTCTACTGTTCAGCAGCTGGAGGCTCCATACAACAGTGATGCCGTTCTGGTGCACAGAATTCACAGTTACCTGGAGAGACACGGCCTTATCAACTTCGGAATCTACAAACGCGTCAAACCACTACCCAgcaAGAAAACAGGGAAGGTGATTGTGATTGGTGGGGGTGTGTCAGGTTTGGCGGCGGCGAGGCAGCTGCAGAGTTTCGGCATGGATGTCACAGTGCTGGAGGCCAGGGACCGTGTGGGAGGAAGAGTGGCCACTTTCCGTAAAGGGAACTATGTAGCAGACCTGGGGGCAATGGTGGTGACTGGCCTGGgtgGGAACCCCATGGCTGTGGTCAGTAAGCAAGTCAATATGGAGTTGgccaaaatcaaacaaaagtgTCCGCTATATGAGGCTAATGGCCAGGCTggaGAACGCTGCACAAGTgttcCTAAGGAGAAGGACGAGATGGTGGAGCAGGAGTTTAACAGACTGCTGGAGGCCACGTCGTTCCTCAGTCACCAGCTGGACTTCAACTTCCTCAATAACAAACCTGTTTCTCTGGGTCAGGCACTGGAGGTCGTCATACAgctcCAGGAAAAGCATGTGAAAGATGAACAGATAGAGCACTGGAAGAAGATAGTAAAGACCCAGGAGGAGCTCAAAGAGCTGCTTAATAAGaTGGTTGCCACTAAAGAGAAGGTGAAGGAGCTTCACCAGCAGTATAAAGAGGCCAGTGAGGTGAAACCTCCCAGAGATATCACTGCAGAGTTTctagttaaaagtaaacatCGGGATCTCACAGCTCTCTGCAAGGATTATGATGCGCTGGCTGAGCAGCAGGCTAAACTGGAAGAGAGGCTACAGGAGCTTGAAGCAAATCCACCCAGtgatGTGTATCTGTCGTCTAGAGATCGGCAGATACTGGACTGGCACTTTGCTAATCTGGAGTTTGCTAATGCCACACCCCTCTCTACTCTCTCCCTCAAACACTGGGATCAGgatgaTGATTTTGAGTTCACAGGAAGTCACCTGACTGTGCGAAACGGTTACTCCTGCGTTCCTGTGGCTCTGGCTGAGGGTTTGGACATTAAACTCAACACGGCTGTCCGGCAGGTGCGCTACACCTCATCAGgctgtgAGGTAATAGCGGTGAACACTCGCTCCACCACTCAGACGTTTATTTATAAGTGTGATGCGGTGTTGTGCACCCTGCCGCTGGGGGTGATGAAGCAGCAGCCGCCTGCCGTGCAGTTCGTCCCACCACTGCCCGAGTGGAAAACATCCGCCATCCAGAGGATGGGCTTTGGAAACCTCaacaagGTGGTGCTGTGTTTTGACCGTGTGTTCTGGGACCCCAGTGTGAATCTGTTCGGCCATGTTGGGAGCACCACTGCCAGCCGCGGGGAACTGTTTCTGTTCTGGAACCTTTACAAAGCCCCCATCCTGCTGGCCCTGATGGCTGGAGAAGCGGCGGGCATTATGGAGAACATTAGCGATGACGTCATTGTGGGCCGTTGCCTAGCGATTCTGAAGGGCATCTTTGGCAGCAGTGCAGTTCCTCAGCCGAAGGAGACGGTGGTGACGCGCTGGCGTGCGGACCCCTGGGCTCGAGGCTCGTACTCGTACGTGGCAGCCGGCTCCTCCGGAAACGACTATGACCTGATGGCCCAGCCCATCACACCTGGACCAGCTATACCTGGAGCATCACAGCCGGTGCCGCGTCTCTTCTTCGCCGGAGAACACACGATCCGGAACTATCCAGCTACAGTACACGGAGCCCTGCTGAGCGGCCTGAGGGAAGCCGGACGCATCGCTGACCAGTTCCTGGGAGCCATGTACACACTGCCTAgacaaaacacaaatacagcCAACGCACAGCCCTCACCCAgcgtttaaacacacacacacacacacacacactccaacctGCAATCATGAACTACCGTGAAGAGCAGGTGTGTTTACCTGGACGCTCCAGCTCAGTTTATCTGCTTAAACACACTGAACCTTCAGTCAGGTGTGTTTGAACAGGTAAAGCACTGTGCTGGAATATGACtggacacacatatatacacacacacacacacacaccacacacacacatatatatacacacacacacacactcttacagaTTGTATAGCTCATACACAGtaacatttaatttacatatttacaaacttgaaaacactgtgtaactgtacactgtacacacacactataatacacacagtacacatgAGTATTGTACAgttgctgtttgtgtgtgtgtgtgtaggggggtgCCCACAGTGCCCACCCCCCCAAAACCGATGACACACTTCTTCTCCACTACTCTGTGTACAGCAGTGCTCTcagactcctcctcctccatatAGTATAAACTCACAGCTCTGAACTCTGATTAAAACCCAGCTGTGGCTGAGGTGGAGAAGTGAGGCTGAGAGGAACAGAGGTGTGGTAGATTACCCCGTCAGTGTGAGCTCTGAATTCTGCTGATCtccacttttttcttttgttgttcacCTCTAGATGAGTTTAGCTGAAGATGGAGAAACAGTAGCTGCTTaagtaaagcttttttttttttttttggaaatatgaAAAGTGTCGTTTTGCATTAagctaaatgtgttttttgttctgtagctttattttatatcattCTTATTTTTGTcaagtttttatattttgtggGAATTTGGTATTAAATGGAGACAAGAAGACTA
>XM_022672632.1
GCACTGCTCCGTGGTTCCTTTGTGCCGGACGGTAGCAGaagagCGTGTGAATGGATATTTCCCGCTGCACCGAGAAATgggtaaaacaaaacaagGAGAGGCCACTGTCTTCCTCCATTATGCTGGCGAATAAGAAAGACTCCGccccctcctcctcatcctcctcctcctctggagGTAACGGTGTTGAACGCTCATTGGACGCTCCAGCCGGCCCGGCCCCTGGCCCTGCTGGTCCCGCTCCAGGCCCTGCCGACGTCAAAAAGAAGGAGAGGGCATCTCCGAGTGGCGAGGGTGGCGGCCCGCCCCTCCCGCACCCTCCCGGTCCAGGGGGCATCGACCAGGACTCTGCTGAAGGGCGACGGACCAGCCGCCGGAAGCGAGCCAAACAGGTGGAGTACAGAGAGATGGACGAGAGCCTGGCTAACCTGTCGGAGGACGAGTATTActcagaggaggagaggaacgCTAAAGCAGAAAAAGAGCGCAAACAGGTGGTGCCCCCACCCGCCCCTccagtggaggaggagaacgaCAGCGAGCCAGACGAGCCGTCAGGTTTGGAGGGCGCAGCTTTCCAGAGCCGCCTTCCACACGATCGAATGACGTCCCAGGAAGCTGCGTGTTTCCCTGACATTATTAATGGACCACAACAAACGCAGAAGGTTTTCCTGTACATCCGGAACCGCACACTCCAGCTGTGGTTGGATAACCCAAAAGTCCAGCTCACCTTCGAGTCTACTGTTCAGCAGCTGGAGGCTCCATACAACAGTGATGCCGTTCTGGTGCACAGAATTCACAGTTACCTGGAGAGACACGGCCTTATCAACTTCGGAATCTACAAACGCGTCAAACCACTACCCAgcaAGAAAACAGGGAAGGTGATTGTGATTGGTGGGGGTGTGTCAGGTTTGGCGGCGGCGAGGCAGCTGCAGAGTTTCGGCATGGATGTCACAGTGCTGGAGGCCAGGGACCGTGTGGGAGGAAGAGTGGCCACTTTCCGTAAAGGGAACTATGTAGCAGACCTGGGGGCAATGGTGGTGACTGGCCTGGgtgGGAACCCCATGGCTGTGGTCAGTAAGCAAGTCAATATGGAGTTGgccaaaatcaaacaaaagtgTCCGCTATATGAGGCTAATGGCCAGGCTggaGAACGCTGCACAAGTgttcCTAAGGAGAAGGACGAGATGGTGGAGCAGGAGTTTAACAGACTGCTGGAGGCCACGTCGTTCCTCAGTCACCAGCTGGACTTCAACTTCCTCAATAACAAACCTGTTTCTCTGGGTCAGGCACTGGAGGTCGTCATACAgctcCAGGAAAAGCATGTGAAAGATGAACAGATAGAGCACTGGAAGAAGATAGTAAAGACCCAGGAGGAGCTCAAAGAGCTGCTTAATAAGaTGGTTGCCACTAAAGAGAAGGTGAAGGAGCTTCACCAGCAGTATAAAGAGGCCAGTGAGGTGAAACCTCCCAGAGATATCACTGCAGAGTTTctagttaaaagtaaacatCGGGATCTCACAGCTCTCTGCAAGGATTATGATGCGCTGGCTGAGCAGCAGGCTAAACTGGAAGAGAGGCTACAGGAGCTTGAAGCAAATCCACCCAGtgatGTGTATCTGTCGTCTAGAGATCGGCAGATACTGGACTGGCACTTTGCTAATCTGGAGTTTGCTAATGCCACACCCCTCTCTACTCTCTCCCTCAAACACTGGGATCAGgatgaTGATTTTGAGTTCACAGGAAGTCACCTGACTGTGCGAAACGGTTACTCCTGCGTTCCTGTGGCTCTGGCTGAGGGTTTGGACATTAAACTCAACACGGCTGTCCGGCAGGTGCGCTACACCTCATCAGgctgtgAGGTAATAGCGGTGAACACTCGCTCCACCACTCAGACGTTTATTTATAAGTGTGATGCGGTGTTGTGCACCCTGCCGCTGGGGGTGATGAAGCAGCAGCCGCCTGCCGTGCAGTTCGTCCCACCACTGCCCGAGTGGAAAACATCCGCCATCCAGAGGATGGGCTTTGGAAACCTCaacaagGTGGTGCTGTGTTTTGACCGTGTGTTCTGGGACCCCAGTGTGAATCTGTTCGGCCATGTTGGGAGCACCACTGCCAGCCGCGGGGAACTGTTTCTGTTCTGGAACCTTTACAAAGCCCCCATCCTGCTGGCCCTGATGGCTGGAGAAGCGGCGGGCATTATGGAGAACATTAGCGATGACGTCATTGTGGGCCGTTGCCTAGCGATTCTGAAGGGCATCTTTGGCAGCAGTGCAGTTCCTCAGCCGAAGGAGACGGTGGTGACGCGCTGGCGTGCGGACCCCTGGGCTCGAGGCTCGTACTCGTACGTGGCAGCCGGCTCCTCCGGAAACGACTATGACCTGATGGCCCAGCCCATCACACCTGGACCAGCTATACCTGGAGCATCACAGCCGGTGCCGCGTCTCTTCTTCGCCGGAGAACACACGATCCGGAACTATCCAGCTACAGTACACGGAGCCCTGCTGAGCGGCCTGAGGGAAGCCGGACGCATCGCTGACCAGTTCCTGGGAGCCATGTACACACTGCCTAgacaaaacacaaatacagcCAACGCACAGCCCTCACCCAgcgtttaaacacacacacacacacacacacactccaacctGCAATCATGAACTACCGTGAAGAGCAGGTGTGTTTACCTGGACGCTCCAGCTCAGTTTATCTGCTTAAACACACTGAACCTTCAGTCAGGTGTGTTTGAACAGGTAAAGCACTGTGCTGGAATATGACtggacacacatatatacacacacacacacacacaccacacacacacatatatatacacacacacacacactcttacagaTTGTATAGCTCATACACAGtaacatttaatttacatatttacaaacttgaaaacactgtgtaactgtacactgtacacacacactataatacacacagtacacatgAGTATTGTACAgttgctgtttgtgtgtgtgtgtgtaggggggtgCCCACAGTGCCCACCCCCCCAAAACCGATGACACACTTCTTCTCCACTACTCTGTGTACAGCAGTGCTCTcagactcctcctcctccatatAGTATAAACTCACAGCTCTGAACTCTGATTAAAACCCAGCTGTGGCTGAGGTGGAGAAGTGAGGCTGAGAGGAACAGAGGTGTGGTAGATTACCCCGTCAGTGTGAGCTCTGAATTCTGCTGATCtccacttttttcttttgttgttcacCTCTAGATGAGTTTAGCTGAAGATGGAGAAACAGTAGCTGCTTaagtaaagcttttttttttttttttggaaatatgaAAAGTGTCGTTTTGCATTAagctaaatgtgttttttgttctgtagctttattttatatcattCTTATTTTTGTcaagtttttatattttgtggGAATTTGGTATTAAATGGAGACAAGAAGACTA
>XM_022672633.1
GCACTGCTCCGTGGTTCCTTTGTGCCGGACGGTAGCAGaagagCGTGTGAATGGATATTTCCCGCTGCACCGAGAAATgggtaaaacaaaacaagGAGAGGCCACTGTCTTCCTCCATTATGCTGGCGAATAAGAAAGACTCCGccccctcctcctcatcctcctcctcctctggagGTAACGGTGTTGAACGCTCATTGGACGCTCCAGCCGGCCCGGCCCCTGGCCCTGCTGGTCCCGCTCCAGGCCCTGCCGACGTCAAAAAGAAGGAGAGGGCATCTCCGAGTGGCGAGGGTGGCGGCCCGCCCCTCCCGCACCCTCCCGGTCCAGGGGGCATCGACCAGGACTCTGCTGAAGGGCGACGGACCAGCCGCCGGAAGCGAGCCAAAGTGGAGTACAGAGAGATGGACGAGAGCCTGGCTAACCTGTCGGAGGACGAGTATTActcagaggaggagaggaacgCTAAAGCAGAAAAAGAGCGCAAACAGGTGGTGCCCCCACCCGCCCCTccagtggaggaggagaacgaCAGCGAGCCAGACGAGCCGTCAGGTTTGGAGGGCGCAGCTTTCCAGAGCCGCCTTCCACACGATCGAATGACGTCCCAGGAAGCTGCGTGTTTCCCTGACATTATTAATGGACCACAACAAACGCAGAAGGTTTTCCTGTACATCCGGAACCGCACACTCCAGCTGTGGTTGGATAACCCAAAAGTCCAGCTCACCTTCGAGTCTACTGTTCAGCAGCTGGAGGCTCCATACAACAGTGATGCCGTTCTGGTGCACAGAATTCACAGTTACCTGGAGAGACACGGCCTTATCAACTTCGGAATCTACAAACGCGTCAAACCACTACCCAgcaAGAAAACAGGGAAGGTGATTGTGATTGGTGGGGGTGTGTCAGGTTTGGCGGCGGCGAGGCAGCTGCAGAGTTTCGGCATGGATGTCACAGTGCTGGAGGCCAGGGACCGTGTGGGAGGAAGAGTGGCCACTTTCCGTAAAGGGAACTATGTAGCAGACCTGGGGGCAATGGTGGTGACTGGCCTGGgtgGGAACCCCATGGCTGTGGTCAGTAAGCAAGTCAATATGGAGTTGgccaaaatcaaacaaaagtgTCCGCTATATGAGGCTAATGGCCAGGCTggaGAACGCTGCACAAGTgttcCTAAGGAGAAGGACGAGATGGTGGAGCAGGAGTTTAACAGACTGCTGGAGGCCACGTCGTTCCTCAGTCACCAGCTGGACTTCAACTTCCTCAATAACAAACCTGTTTCTCTGGGTCAGGCACTGGAGGTCGTCATACAgctcCAGGAAAAGCATGTGAAAGATGAACAGATAGAGCACTGGAAGAAGATAGTAAAGACCCAGGAGGAGCTCAAAGAGCTGCTTAATAAGaTGGTTGCCACTAAAGAGAAGGTGAAGGAGCTTCACCAGCAGTATAAAGAGGCCAGTGAGGTGAAACCTCCCAGAGATATCACTGCAGAGTTTctagttaaaagtaaacatCGGGATCTCACAGCTCTCTGCAAGGATTATGATGCGCTGGCTGAGCAGCAGGCTAAACTGGAAGAGAGGCTACAGGAGCTTGAAGCAAATCCACCCAGtgatGTGTATCTGTCGTCTAGAGATCGGCAGATACTGGACTGGCACTTTGCTAATCTGGAGTTTGCTAATGCCACACCCCTCTCTACTCTCTCCCTCAAACACTGGGATCAGgatgaTGATTTTGAGTTCACAGGAAGTCACCTGACTGTGCGAAACGGTTACTCCTGCGTTCCTGTGGCTCTGGCTGAGGGTTTGGACATTAAACTCAACACGGCTGTCCGGCAGGTGCGCTACACCTCATCAGgctgtgAGGTAATAGCGGTGAACACTCGCTCCACCACTCAGACGTTTATTTATAAGTGTGATGCGGTGTTGTGCACCCTGCCGCTGGGGGTGATGAAGCAGCAGCCGCCTGCCGTGCAGTTCGTCCCACCACTGCCCGAGTGGAAAACATCCGCCATCCAGAGGATGGGCTTTGGAAACCTCaacaagGTGGTGCTGTGTTTTGACCGTGTGTTCTGGGACCCCAGTGTGAATCTGTTCGGCCATGTTGGGAGCACCACTGCCAGCCGCGGGGAACTGTTTCTGTTCTGGAACCTTTACAAAGCCCCCATCCTGCTGGCCCTGATGGCTGGAGAAGCGGCGGGCATTATGGAGAACATTAGCGATGACGTCATTGTGGGCCGTTGCCTAGCGATTCTGAAGGGCATCTTTGGCAGCAGTGCAGTTCCTCAGCCGAAGGAGACGGTGGTGACGCGCTGGCGTGCGGACCCCTGGGCTCGAGGCTCGTACTCGTACGTGGCAGCCGGCTCCTCCGGAAACGACTATGACCTGATGGCCCAGCCCATCACACCTGGACCAGCTATACCTGGAGCATCACAGCCGGTGCCGCGTCTCTTCTTCGCCGGAGAACACACGATCCGGAACTATCCAGCTACAGTACACGGAGCCCTGCTGAGCGGCCTGAGGGAAGCCGGACGCATCGCTGACCAGTTCCTGGGAGCCATGTACACACTGCCTAgacaaaacacaaatacagcCAACGCACAGCCCTCACCCAgcgtttaaacacacacacacacacacacacactccaacctGCAATCATGAACTACCGTGAAGAGCAGGTGTGTTTACCTGGACGCTCCAGCTCAGTTTATCTGCTTAAACACACTGAACCTTCAGTCAGGTGTGTTTGAACAGGTAAAGCACTGTGCTGGAATATGACtggacacacatatatacacacacacacacacacaccacacacacacatatatatacacacacacacacactcttacagaTTGTATAGCTCATACACAGtaacatttaatttacatatttacaaacttgaaaacactgtgtaactgtacactgtacacacacactataatacacacagtacacatgAGTATTGTACAgttgctgtttgtgtgtgtgtgtgtaggggggtgCCCACAGTGCCCACCCCCCCAAAACCGATGACACACTTCTTCTCCACTACTCTGTGTACAGCAGTGCTCTcagactcctcctcctccatatAGTATAAACTCACAGCTCTGAACTCTGATTAAAACCCAGCTGTGGCTGAGGTGGAGAAGTGAGGCTGAGAGGAACAGAGGTGTGGTAGATTACCCCGTCAGTGTGAGCTCTGAATTCTGCTGATCtccacttttttcttttgttgttcacCTCTAGATGAGTTTAGCTGAAGATGGAGAAACAGTAGCTGCTTaagtaaagcttttttttttttttttggaaatatgaAAAGTGTCGTTTTGCATTAagctaaatgtgttttttgttctgtagctttattttatatcattCTTATTTTTGTcaagtttttatattttgtggGAATTTGGTATTAAATGGAGACAAGAAGACTA

Function

symbol description
kdm1a Predicted to enable chromatin binding activity; flavin adenine dinucleotide binding activity; and histone demethylase activity (H3-dimethyl-K4 specific). Acts upstream of or within nervous system development; regulation of hemopoiesis; and regulation of retinoic acid biosynthetic process. Predicted to be located in nucleus. Is expressed in brain; head; intestine; and spinal cord. Orthologous to human KDM1A (lysine demethylase 1A).

NR:

description
PREDICTED: lysine-specific histone demethylase 1A-like isoform X5

GO:

id name namespace
GO:0034720 histone H3-K4 demethylation biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:1900052 regulation of retinoic acid biosynthetic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005634 nucleus cellular_component
GO:0016491 oxidoreductase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0003677 DNA binding molecular_function

KEGG:

id description
K11450 KDM1A, AOF2, LSD1; [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007258933.3 True 3453 mRNA 0.52 22 5179646 5202441
XM_007258935.3 False 3422 mRNA 0.52 21 5179637 5202441
XM_015608289.2 False 3450 mRNA 0.52 22 5179646 5202441
XM_022672632.1 False 3451 mRNA 0.52 22 5179663 5202441
XM_022672633.1 False 3448 mRNA 0.52 22 5179663 5202441

Neighbor

gene id symbol gene type direction distance location
LOC103044998 LOC103044998 coding upstream 519935 4650154 ~ 4659702 (+)
wars wars,LOC107088074 coding upstream 570452 4601941 ~ 4609185 (+)
begain NA coding upstream 589439 4574276 ~ 4590198 (+)
LOC103040906 ppp2r5c,LOC106937856 coding upstream 692730 4466364 ~ 4486907 (+)
LOC103042329 NA coding upstream 792132 4380307 ~ 4387505 (+)
ptafr NA coding downstream 79573 5282014 ~ 5289766 (+)
pacrg pacrg,LOC107583491,LOC107695182,LOC107697704,LOC107590953 coding downstream 142695 5345136 ~ 5440734 (+)
mrps5 mrps5 coding downstream 1425552 6627993 ~ 6683113 (+)
LOC103028352 ttbk1b,LOC108430218,LOC107583645,LOC107670856,LOC107553314,LOC107689778 coding downstream 1571285 6773726 ~ 6826064 (+)
LOC103028659 NA coding downstream 1631144 6833585 ~ 6850452 (+)
G78172 NA non-coding upstream 688983 4477866 ~ 4490654 (+)
G78122 nemf,LOC102775640 non-coding upstream 826360 4351453 ~ 4353277 (+)
G78117 NA non-coding upstream 859310 4318054 ~ 4320327 (+)
LOC111193172 NA non-coding upstream 893406 4278111 ~ 4286231 (+)
G78066 NA non-coding upstream 1020320 4158517 ~ 4159317 (+)
G78283 NA non-coding downstream 2641 5205082 ~ 5207413 (+)
G78282 NA non-coding downstream 90314 5292755 ~ 5294206 (+)
G78397 NA non-coding downstream 1354792 6557233 ~ 6563936 (+)
G78408 NA non-coding downstream 1422260 6624701 ~ 6627742 (+)
G78409 NA non-coding downstream 1471362 6673803 ~ 6674290 (+)
G78111 pole2 other upstream 881453 4289507 ~ 4298184 (+)
g2e3 g2e3 other upstream 1354765 3765780 ~ 3824872 (+)
traf3 traf3,LOC107719479,LOC107694716,LOC107733154,LOC107590913 other upstream 1819893 3322085 ~ 3359744 (+)
G77722 NA other upstream 2201543 2900134 ~ 2978094 (+)
LOC103031026 NA other upstream 2715316 2458445 ~ 2464321 (+)
LOC103025550 qkia,LOC108413473,LOC107721620,LOC107590898,LOC107697705,LOC103376478,LOC108269894 other downstream 249674 5452115 ~ 5530055 (+)
LOC103024862 LOC108430185 other downstream 1654913 6857354 ~ 6872405 (+)
G78671 LOC107659230,LOC107583602 other downstream 2392266 7594707 ~ 7607664 (+)
fam167b LOC108433301,LOC101067225 other downstream 2453866 7656307 ~ 7729001 (+)
G78817 gale,LOC107583591,LOC107721820,LOC107583106 other downstream 3327413 8529854 ~ 8549968 (+)

Expression


Co-expression Network