LOC103041189 (si:dkey-13p1.4,LOC103041189,LOC108436737,LOC107697687,LOC107674053,LOC107733120,LOC107719509,LOC108269552)


Basic Information

Item Value
gene id LOC103041189
gene name si:dkey-13p1.4,LOC103041189,LOC108436737,LOC107697687,LOC107674053,LOC107733120,LOC107719509,LOC108269552
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 646899 ~ 651689 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015607316.2
CGGGGGTCTGAGTGAGATGTCTGAGCTGCGGATTCAGGATGTTGTCTCCAGATGTGGAAAGTGATACGACTGCGGAGGAAACGGCGCCCAGCAGCCCGAACAGCGGCGCGGACACCCCGGCCAGCCTGGATGCGCTGGAGGAGCAAACGCCAGTGCAGCAGTCCCTGAGTGCATCCATGTGCCGCGAGATGCACTGGCGCTGTCTCCTCCTGTCTCTGCTGATGTACAGCTGTCTGGGTGCCGTGGCCTGGTGTCAGTTCACTCGCGTCACCAAGCTGAGTTTTGACTCCTCCAGCACCTCTTCCCTGACCTCCATCAACTCGCTCCGAGACGGAGGAGGACGCTCCATGATCTACCACGACAGCCCCTGCTCAGACGGGTACGTCTACATCCCCCTGGCCTTCCTGCTGATGCTCTACGCGGTCTACCTAATGGAGTGCTGGCACTGCCGCGCCCGCAGCGAGCTTCAGTACAAAGCCAACGTGGACAGCGTCTACGAAAGAGTCCTGCGCATGCGGCAGGCTCGACCGTGCGTCTGGTGGAAAGCCATCAGCTACCATTTCGTGCGGAGGACGCGGCAGGTCACACGGTACCGCAATGGGGACGCCTACACCACGACACAGGTCTACCACGAGCGAGTCAACACCCACGTGGCGGAAGGAGAGTTTGATTACAGTCGCTGTGGGATGAAGGATGTCTCAAGGGACTTGCGTGGCTTGGAGAGCCACACGGCGACGAGGCTACGCTTCAGCAAGTGCTTTAGCTTTGCGGGAGCAGGACCTGAGAACGCGTACCTCAACCAAAGGGCCAGGTTCTTCTCAGAGATTGAAGGTCTGGATGACTACATGGAAGCACGGGAAGGGATGCAGCTAAAGAACGTGGACTTCAAAGAGCATCTCATCACCTATGTGGATCCTGACAGGTTACCCTGGTATACCTCGCAGTTTTCTTTCTGGTTGACTGCTCTCCTCATGCTTTCCTGGCCTCTTCGTGTTTTAATAGAGTACCGCACGGCTTTTGTGCACTACCAGGTGGAGAAACTCTTCGGACTGGAGTACACCAACAGCAGTCCTTCTCCAGAGGACGCTGCTCCTGCGAGAAACGGTCGGTGTGGCATCCCGAGAGGAGACACGGTGGACAGCACAGAGCTGGAATGGCACATTCGTTCAAACCGCCAGCTCATCCCCAGCTACTCGGAAGCGATGCTGATGAATTTGGGGAACTCTGGAACAGGTCAAGGCGACAATTCGTCTTCCAGCTGCTTCTTGCTGGACGATTACCTGACCCAGAACTATGGAACCATGGTACAAGACTGTGAGCACTGCTGCCAGCTTGAAGGAGGACGTCGAGCCACCATTAGCTCCAGCTGTTCCTCCATCTTTTCTCGCCACACCTTCCACTCGCGGGTGTCCCTGGACACCTCCCGGTTTTCCCTCTGTCGAATGTACGGCTCCAGGCACACCGTGGGGCTGTGGAGGAGCCGGAGCAGTACGCTGACTGAGCGCTGCTGCCCGGATGAACAGTGCTGCAGATCCTACACCAGCCAACTCGCGCTCAACGACAGCCCTCCCAACTACCAGGACGCACGATTCTTCCCTGTGCTCATTGTGCACAGGCGTGAGGGCTGTGGTGATCCTTCAGAAGTGAGGAGATACTACGTCCGCAGGGGTTCCTGCTGTCTGGAGACTTCTCTTTGACttatcaaacaaaataaataaataaaaacactggtcTGAAAGAAAGTCAATCGAACAAGAACGACCAAAGAACTGTTCCAAGCTTTTAAgaggattttaaaaaatcaatgatGGAtcaaatcgtcgctgtccaatggaaAACACTTATatcaggaaagagaaaaaaacttatAAACCTTCAATGGAACTcaaagtaaaaagagtttatttcaggtcattttgaagagtttctattggtccgttcatcaaaaaatgttggcacagt

Function

symbol description
si:dkey-13p1.4 Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
transmembrane protein 151B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015607316.2 True 1962 mRNA 0.54 2 646899 651689

Neighbor

gene id symbol gene type direction distance location
itpka itpka coding upstream 151231 470513 ~ 495668 (+)
LOC103044274 LOC108425589,LOC108269650,LOC107697665,LOC107719518,LOC107563387 coding upstream 277896 359136 ~ 369003 (+)
ccdc32 cunh15orf57,LOC103043985 coding upstream 291919 352153 ~ 354980 (+)
disp2 disp2 coding upstream 308952 321307 ~ 337947 (+)
degs2 degs2,LOC107697737,LOC107733197,LOC107674056 coding upstream 457765 178406 ~ 189134 (+)
adprhl2 adprhl2,LOC107697751,LOC107674064,LOC107594801,LOC107719508 coding downstream 9850 661539 ~ 666304 (+)
cinp NA coding downstream 15516 667205 ~ 671575 (+)
nubpl nubpl,LOC107719449,LOC107697759,LOC107561549,LOC107733195,LOC107674123 coding downstream 102550 754239 ~ 761723 (+)
arhgap5 arhgap5,LOC107594795,LOC107733129,LOC107719447,LOC107561551 coding downstream 124435 776124 ~ 814690 (+)
eef1akmt2 mettl10 coding downstream 183288 834977 ~ 838153 (+)
G77148 NA non-coding upstream 25604 614011 ~ 621295 (+)
G77137 NA non-coding upstream 80244 566365 ~ 566655 (+)
G77135 NA non-coding upstream 85728 560903 ~ 561171 (+)
G77060 NA non-coding upstream 112295 522310 ~ 534604 (+)
G77054 NA non-coding upstream 117056 516626 ~ 529843 (+)
G77163 NA non-coding downstream 6227 657916 ~ 660202 (+)
G77166 NA non-coding downstream 23187 674876 ~ 677225 (+)
G77174 NA non-coding downstream 47233 698922 ~ 760923 (+)
G77191 NA non-coding downstream 108725 760414 ~ 777173 (+)
G77181 NA non-coding downstream 134550 786239 ~ 894659 (+)
G77154 NA other upstream 14527 631714 ~ 632372 (+)
G77059 NA other upstream 126309 519633 ~ 520590 (+)
ldah ldah other upstream 513596 84719 ~ 133303 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other downstream 231608 883297 ~ 935678 (+)
G77212 NA other downstream 353440 1005129 ~ 1008842 (+)
G77410 NA other downstream 832981 1484670 ~ 1485050 (+)
c9h15orf52 NA other downstream 877281 1528970 ~ 1563180 (+)
G77471 bub1b other downstream 1041667 1693356 ~ 1696981 (+)

Expression


Co-expression Network