LOC103026149 (LOC108430664,LOC108269450,LOC107567345,LOC107678748,LOC107743909)


Basic Information

Item Value
gene id LOC103026149
gene name LOC108430664,LOC108269450,LOC107567345,LOC107678748,LOC107743909
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 2471398 ~ 2474791 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022672489.1
ACGGGGCTGAAGTCCAGTACTGATAGGCTGTGTTTTAGTGTAGTCTGTAGATTTGTGGGTTTCTGTGGACTCTGAGATTGAAGCTGCCAGCCTGGATTTCTTCCTCTTATTCAATTTTGCACAAATACAAGAGAAATCCCAGCCTGTGTGAAGTGCTCCCACTGCTAAAGGATGGAGACTCTGAGCAGTCGGGTGGTGGCCTTTCTGAGCATGCTCATTTCGACCGGGGCTCTAGCAGTGCAGCCACATGCTAAAAACATCCATCTGCTTTCTTCAGAGGAGCACAAATTCATCCTAAACCTTGGACATAAAGAGATCCCCAGAGACTGCTATGACCTGTGGGAGGGCTCTGGAGCTAAGTCACCGGATGGAGTCTACTTGATTAAACCTGCAGACACGCCCATCGTCGCCTACTGCGCCATGCAGGAAGGAGGCTGGACGGTCATCCAGCACATCACGGTCAACAGCAGCGTGGACTTCGACCGTTCTTGGGAAGAGTACAAGTTGGGCTTTGGGAGTCTCACTGGTAACCACTGGCTGGGAAACGACTACATCCACCAACTCACCGTTGGTCCTGGGCGCTACAAGCTGGGCATCAAGTTGGTGGATAAAGATGCCGTGACCAAGACAGGCGAGTATGATCCGGTGCTGGTGGAGGGAGAAGATGCCCAGTACCGCCTCCGCCTCGGCTTGTATCAAGGAACAGCTTTGGATGCTCTAACCCTGGACCCGGAGAACTACCTCCACGACAACCAGAAGTTCACCACCAAGGACCGCGATAATGACAACTACTACCAGAACTGTGCCAAGCTCCAGTTCCAGGGAGTAGCAGGAGGGGGGTGGTGGTACGACGCTTGCGCCGGAGCCAACCTGAACCGCCGCAACGTCATCTACTGGCAGAAGGACTGCAACAAGGAACATCTGTGCAAATACGCCTGGATGATGGTGAAGCCCTCAGAGACCGTCAAAATCATTCGACCCGCAGACTGCAAAAGAGATGAGCTCTGAATTCATCATATCATACAGGGGTTgagcaatgaaactgaaacacctggtttcatTTCtaattgtggtgacggacagttctggtggaaacaggagagttga

Function

NR:

description
PREDICTED: fibrinogen-like protein 1-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022672489.1 True 1107 mRNA 0.52 3 2471398 2474791

Neighbor

gene id symbol gene type direction distance location
LOC103026471 LOC100304858 coding upstream 2836 2465310 ~ 2468562 (+)
fsip1 NA coding upstream 158736 2247051 ~ 2312662 (+)
dnajc17 dnajc17 coding upstream 325122 2087613 ~ 2146276 (+)
LOC107197725 LOC108430641,LOC108269631 coding upstream 616520 1836789 ~ 1854878 (+)
LOC103033947 LOC107560184,LOC107678711,LOC107726575 coding upstream 640303 1805947 ~ 1831095 (+)
LOC103030398 LOC108430666,LOC106610840,LOC105908184,LOC108270264 coding downstream 285879 2760670 ~ 2864439 (+)
eif2ak4 eif2ak4,LOC107673787 coding downstream 433818 2908609 ~ 2957430 (+)
tecpr2 tecpr2,LOC107758275 coding downstream 787000 3261791 ~ 3296653 (+)
rcor1 rcor1,LOC107719500,LOC107590914,LOC107733187 coding downstream 835027 3309818 ~ 3324750 (+)
LOC103028495 ehd4,LOC108430677,LOC108270320,LOC107697720,LOC107694734,LOC107582305,LOC107719481 coding downstream 890951 3365742 ~ 3393158 (+)
G77566 acp7 non-coding upstream 18953 2399999 ~ 2452445 (+)
G77569 NA non-coding upstream 48452 2411527 ~ 2422946 (+)
G77559 thbs1,LOC107668245,LOC107756566,LOC102310807,LOC101487021,LOC102776654 non-coding upstream 150393 2320215 ~ 2321005 (+)
G77533 NA non-coding upstream 153918 2293289 ~ 2317480 (+)
G77544 NA non-coding upstream 167568 2261986 ~ 2303830 (+)
G77711 NA non-coding downstream 227408 2702199 ~ 2713270 (+)
G77712 NA non-coding downstream 244332 2719123 ~ 2743611 (+)
G77715 NA non-coding downstream 334768 2809559 ~ 2828232 (+)
G77716 NA non-coding downstream 357777 2832568 ~ 2869809 (+)
G77717 LOC108430628,LOC108269477,LOC107745352,LOC107711907 non-coding downstream 395066 2869857 ~ 2870831 (+)
LOC103031026 NA other upstream 7077 2458445 ~ 2464321 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other upstream 461980 1912532 ~ 2009418 (+)
zfyve19 zfyve19 other upstream 763101 1697965 ~ 1708297 (+)
G77471 bub1b other upstream 774417 1693356 ~ 1696981 (+)
c9h15orf52 NA other upstream 908218 1528970 ~ 1563180 (+)
G77722 NA other downstream 425343 2900134 ~ 2978094 (+)
traf3 traf3,LOC107719479,LOC107694716,LOC107733154,LOC107590913 other downstream 847294 3322085 ~ 3359744 (+)
g2e3 g2e3 other downstream 1290989 3765780 ~ 3824872 (+)
G78111 pole2 other downstream 1814716 4289507 ~ 4298184 (+)
LOC103025550 qkia,LOC108413473,LOC107721620,LOC107590898,LOC107697705,LOC103376478,LOC108269894 other downstream 2977324 5452115 ~ 5530055 (+)

Expression


Co-expression Network